| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Methanococcus maripaludis S2 | MMP_RS02635 | | class I SAM-dependent methyltransferase | insig. | 100 | 100 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15820 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 35 | 48 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00450 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 31 | 44 |
| | Variovorax sp. OAS795 | ABID97_RS19080 | | class I SAM-dependent methyltransferase | insig. | 34 | 44 |
| | Shewanella loihica PV-4 | Shew_3373 | | ubiquinone/menaquinone biosynthesis methyltransferase (RefSeq) | no data | 33 | 44 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 32 | 60 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19485 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 30 | 44 |
| | Pseudomonas stutzeri RCH2 | Psest_3940 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 30 | 45 |
| | Azospirillum sp. SherDot2 | MPMX19_01135 | | putative methyltransferase YcgJ | insig. | 28 | 55 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02005 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 27 | 49 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04613 | | demethylmenaquinone methyltransferase /2-octaprenyl-6-methoxy-1,4-benzoquinone methylase | no data | 27 | 50 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS03165 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 27 | 50 |
| | Shewanella amazonensis SB2B | Sama_3202 | | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (RefSeq) | no data | 30 | 44 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15120 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 29 | 48 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_00445 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 32 | 44 |
| | Paraburkholderia graminis OAS925 | ABIE53_000771 | | demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 28 | 44 |
| | Shewanella oneidensis MR-1 | SO4199 | ubiE | ubiquinone/menaquinone biosynthesis methlytransferase UbiE (NCBI ptt file) | no data | 30 | 44 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14715 | | Biotin synthase | insig. | 26 | 46 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00196 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 24 | 77 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4794 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 29 | 47 |
| | Cellulophaga baltica 18 | M666_RS08585 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 31 | 46 |
| | Shewanella sp. ANA-3 | Shewana3_3725 | | demethylmenaquinone methyltransferase (RefSeq) | no data | 30 | 44 |
| | Paraburkholderia graminis OAS925 | ABIE53_001313 | | SAM-dependent methyltransferase | sig. | 26 | 58 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03975 | | class I SAM-dependent methyltransferase | insig. | 25 | 52 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03430 | | SAM-dependent methyltransferase | insig. | 25 | 71 |
| | Rhodospirillum rubrum S1H | Rru_A1529 | | Transcriptional Regulator, ArsR family (NCBI) | cofit | 30 | 44 |
| | Rhodopseudomonas palustris CGA009 | TX73_018460 | | arsenite methyltransferase | insig. | 30 | 64 |
| | Enterobacter sp. TBS_079 | MPMX20_00895 | | putative methyltransferase YcgJ | insig. | 30 | 48 |
| | Marinobacter adhaerens HP15 | HP15_2483 | | protein containing methyltransferase type 11 domain | insig. | 32 | 46 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4216 | | ubiquinone/menaquinone biosynthesis methyltransferase (NCBI ptt file) | no data | 29 | 44 |
| | Escherichia fergusonii Becca | EFB2_04782 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 45 |
| | Escherichia coli ECOR27 | NOLOHH_06435 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli ECOR38 | HEPCGN_12935 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 30 | 45 |
| | Escherichia coli ECRC100 | OKFHMN_14305 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli ECRC101 | MCAODC_04810 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli ECRC102 | NIAGMN_12060 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli ECRC62 | BNILDI_05095 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli ECRC98 | JDDGAC_17930 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli ECRC99 | KEDOAH_13845 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04218 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 30 | 45 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22115 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 30 | 45 |
| | Escherichia coli BW25113 | b3833 | ubiE | ubiquinone/menaquinone biosynthesis methyltransferase (NCBI) | no data | 30 | 45 |
| | Serratia liquefaciens MT49 | IAI46_01065 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 45 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05220 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 25 | 64 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS02400 | | ubiquinone biosynthesis methyltransferase UbiE | no data | 26 | 44 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_08650 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 29 | 45 |
| | Erwinia tracheiphila SCR3 | LU632_RS24005 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 29 | 45 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1855 | | putative methyl transferase (NCBI ptt file) | insig. | 31 | 68 |
| | Escherichia coli BL21 | ECD_03726 | | bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase | no data | 30 | 44 |
| | Erwinia amylovora T8 | OLJFJH_06500 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 29 | 45 |
| | Pectobacterium carotovorum WPP14 | HER17_RS20610 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 45 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.858.1 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 41 |
| | Variovorax sp. SCN45 | GFF2542 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase (EC 2.1.1.201) | no data | 28 | 47 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS07400 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 26 | 44 |
| | Marinobacter adhaerens HP15 | HP15_3191 | | ubiquinone/menaquinone biosynthesis methyltransferase UbiE | no data | 27 | 52 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS11440 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 26 | 44 |
| | Ralstonia solanacearum GMI1000 | RS_RS02270 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 26 | 44 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS21770 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 26 | 44 |
| | Ralstonia solanacearum UW163 | UW163_RS02145 | | ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 26 | 44 |
| | Caulobacter crescentus NA1000 | CCNA_03595 | | S-adenosylmethionine-dependent methyltransferase | insig. | 34 | 44 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03595 | | S-adenosylmethionine-dependent methyltransferase | insig. | 34 | 44 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01600 | | class I SAM-dependent methyltransferase | cofit | 33 | 40 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03946 | | putative methyltransferase YcgJ | cofit | 30 | 47 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1052.1 | | hypothetical protein | insig. | 29 | 46 |
| | Dickeya dadantii 3937 | DDA3937_RS20330 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 28 | 45 |
| | Azospirillum sp. SherDot2 | MPMX19_00634 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 27 | 42 |
| | Azospirillum sp. SherDot2 | MPMX19_04629 | | D-inositol-3-phosphate glycosyltransferase | insig. | 27 | 49 |
| | Dickeya dadantii 3937 | DDA3937_RS10700 | | class I SAM-dependent methyltransferase | insig. | 31 | 43 |
| | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 30 | 49 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS12670 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 29 | 48 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS16755 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 29 | 48 |
| | Pantoea sp. MT58 | IAI47_18285 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 27 | 48 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15265 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 27 | 48 |
| | Pseudomonas sp. SVBP6 | COO64_RS05655 | | class I SAM-dependent methyltransferase | insig. | 31 | 49 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0744 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 29 | 45 |
| | Klebsiella michiganensis M5al | BWI76_RS01305 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 28 | 45 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04905 | | class I SAM-dependent methyltransferase | insig. | 27 | 48 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05125 | | class I SAM-dependent methyltransferase | insig. | 27 | 48 |
| | Bosea sp. OAE506 | ABIE41_RS10850 | | class I SAM-dependent methyltransferase | no data | 27 | 48 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3379.1 | | Transcriptional regulator, ArsR family / Methyltransferase fusion | sig. | 20 | 70 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.498.1 | | Biotin synthesis protein BioC | no data | 30 | 45 |
| | Variovorax sp. SCN45 | GFF51 | | hypothetical protein | insig. | 30 | 44 |
| | Azospirillum sp. SherDot2 | MPMX19_05980 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 30 | 47 |
| | Dechlorosoma suillum PS | Dsui_0861 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 29 | 44 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11145 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 28 | 44 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28210 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 28 | 44 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50940 | ubiE;go_function=methyltransferase | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 28 | 44 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09795 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1 4-benzoquinol methylase UbiE | no data | 28 | 45 |
| | Pseudomonas sp. BP01 | JOY50_RS09635 | ubiE | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 27 | 44 |
| | Pseudomonas putida KT2440 | PP_5011 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 27 | 44 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14205 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | insig. | 27 | 43 |
| | Dickeya dianthicola 67-19 | HGI48_RS00895 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 27 | 45 |
| | Dickeya dianthicola ME23 | DZA65_RS00955 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 27 | 45 |
| | Shewanella loihica PV-4 | Shew_1721 | | methyltransferase type 11 (RefSeq) | no data | 31 | 45 |
| | Serratia liquefaciens MT49 | IAI46_04605 | | class I SAM-dependent methyltransferase | insig. | 30 | 44 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 29 | 44 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_65 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 29 | 49 |
| | Erwinia amylovora T8 | OLJFJH_16750 | | malonyl-ACP O-methyltransferase BioC | insig. | 29 | 44 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21410 | | SAM-dependent methyltransferase | cofit | 28 | 47 |
| | Enterobacter sp. TBS_079 | MPMX20_04447 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 28 | 45 |