Homologs of GFF968 from Xanthobacter sp. DMC5

Geranylgeranyl diphosphate synthase
SEED: Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
KEGG: geranylgeranyl diphosphate synthase, type II

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF968 Geranylgeranyl diphosphate synthase insig. 100 100
  Pseudomonas stutzeri RCH2 Psest_0400 Geranylgeranyl pyrophosphate synthase insig. 45 76
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14235 polyprenyl synthetase family protein cofit 42 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04395 polyprenyl synthetase family protein insig. 42 74
  Pantoea sp. MT58 IAI47_20650 polyprenyl synthetase family protein insig. 42 79
  Dechlorosoma suillum PS Dsui_3509 geranylgeranyl pyrophosphate synthase no data 40 84
  Synechocystis sp000284455 PCC 6803 SGL_RS02445 polyprenyl synthetase family protein no data 39 75
  Synechococcus elongatus PCC 7942 Synpcc7942_0776 crtE farnesyl-diphosphate synthase no data 40 71
  Marinobacter adhaerens HP15 HP15_581 geranyltranstransferase no data 40 73
  Herbaspirillum seropedicae SmR1 HSERO_RS19130 geranyl transferase no data 41 70
  Burkholderia phytofirmans PsJN BPHYT_RS33580 geranyltranstransferase strong 40 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06016 farnesyl-diphosphate synthase no data 40 80
  Lysobacter sp. OAE881 ABIE51_RS06815 (2E,6E)-farnesyl diphosphate synthase strong 43 73
  Paraburkholderia graminis OAS925 ABIE53_004858 farnesyl diphosphate synthase strong 39 80
  Azospirillum sp. SherDot2 MPMX19_05065 Farnesyl diphosphate synthase insig. 39 69
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS06600 polyprenyl synthetase family protein insig. 40 74
  Azospirillum brasilense Sp245 AZOBR_RS20795 farnesyl-diphosphate synthase no data 39 69
  Pantoea sp. MT58 IAI47_14735 (2E,6E)-farnesyl diphosphate synthase no data 41 72
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26035 ispA (2E 6E)-farnesyl diphosphate synthase no data 38 80
  Erwinia tracheiphila SCR3 LU632_RS18835 ispA (2E,6E)-farnesyl diphosphate synthase no data 38 80
  Shewanella oneidensis MR-1 SO1526 ispA geranyltranstransferase (NCBI ptt file) no data 39 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03710 (2E,6E)-farnesyl diphosphate synthase no data 43 68
  Ralstonia solanacearum UW163 UW163_RS09960 (2E,6E)-farnesyl diphosphate synthase no data 43 68
  Ralstonia solanacearum PSI07 RPSI07_RS13520 polyprenyl synthetase family protein no data 44 66
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10460 (2E,6E)-farnesyl diphosphate synthase no data 40 74
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS03365 polyprenyl synthetase family protein sig. 40 76
  Rhodospirillum rubrum S1H Rru_A2618 Polyprenyl synthetase (NCBI) no data 38 74
  Rhodanobacter sp. FW510-T8 OKGIIK_10250 ispA geranyl transferase no data 39 73
  Ralstonia sp. UNC404CL21Col ABZR87_RS15640 polyprenyl synthetase family protein no data 43 68
  Rhodanobacter denitrificans MT42 LRK55_RS03115 polyprenyl synthetase family protein insig. 40 76
  Shewanella loihica PV-4 Shew_2770 polyprenyl synthetase (RefSeq) sig. 39 70
  Castellaniella sp019104865 MT123 ABCV34_RS02230 polyprenyl synthetase family protein no data 36 80
  Shewanella amazonensis SB2B Sama_2435 geranyltranstransferase (RefSeq) strong 40 72
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1008 Geranylgeranyl pyrophosphate synthase strong 41 69
  Caulobacter crescentus NA1000 CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 44 69
  Caulobacter crescentus NA1000 Δfur CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 44 69
  Variovorax sp. SCN45 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) cofit 40 65
  Ralstonia solanacearum GMI1000 RS_RS11155 polyprenyl synthetase family protein no data 42 66
  Sphingobium sp. HT1-2 GFF2400 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) cofit 41 66
  Erwinia amylovora T8 OLJFJH_18060 (2E 6E)-farnesyl diphosphate synthase no data 40 66
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1890.1 hypothetical protein sig. 41 71
  Pseudomonas sp. S08-1 OH686_15785 (2E,6E)-farnesyl diphosphate synthase no data 41 79
  Acinetobacter baumannii LAC-4 RR41_RS03725 polyprenyl synthetase family protein no data 35 75
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS21690 farnesyl diphosphate synthase no data 41 74
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09695 polyprenyl synthetase family protein cofit 41 76
  Variovorax sp. OAS795 ABID97_RS09275 polyprenyl synthetase family protein strong 38 71
  Pectobacterium carotovorum WPP14 HER17_RS15930 (2E,6E)-farnesyl diphosphate synthase no data 40 74
  Alteromonas macleodii MIT1002 MIT1002_02692 Farnesyl diphosphate synthase no data 35 85
  Cupriavidus basilensis FW507-4G11 RR42_RS15010 geranyl transferase no data 42 67
  Acinetobacter radioresistens SK82 MPMX26_00661 Farnesyl diphosphate synthase no data 35 75
  Fusobacterium nucleatum SB010 HUW76_03605 polyprenyl synthetase family protein cofit 31 73
  Pseudomonas putida KT2440 PP_0528 farnesyl diphosphate synthase no data 42 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS15235 polyprenyl synthetase family protein no data 41 71
  Magnetospirillum magneticum AMB-1 AMB_RS14610 polyprenyl synthetase family protein no data 38 81
  Pseudomonas segetis P6 ACVTMO_RS04985 ispA (2E,6E)-farnesyl diphosphate synthase no data 41 72
  Pseudomonas sp. BP01 JOY50_RS20060 ispA (2E,6E)-farnesyl diphosphate synthase no data 41 72
  Dickeya dadantii 3937 DDA3937_RS05535 (2E,6E)-farnesyl diphosphate synthase no data 41 71
  Shewanella sp. ANA-3 Shewana3_2900 farnesyl-diphosphate synthase (RefSeq) no data 40 72
  Serratia liquefaciens MT49 IAI46_04930 (2E,6E)-farnesyl diphosphate synthase no data 39 72
  Kangiella aquimarina DSM 16071 B158DRAFT_1919 farnesyl-diphosphate synthase (EC 2.5.1.10) no data 34 81
  Klebsiella michiganensis M5al BWI76_RS06385 (2E,6E)-farnesyl diphosphate synthase no data 40 74
  Pseudomonas sp. DMC3 GFF3840 Farnesyl diphosphate synthase no data 41 73
  Methylophilus sp. DMC18 GFF1700 Farnesyl diphosphate synthase no data 39 72
  Erwinia tracheiphila SCR3 LU632_RS23555 polyprenyl synthetase family protein insig. 35 75
  Dickeya dianthicola 67-19 HGI48_RS05595 (2E,6E)-farnesyl diphosphate synthase no data 41 71
  Acidovorax sp. GW101-3H11 Ac3H11_3565 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 40 68
  Vibrio cholerae E7946 ATCC 55056 CSW01_04565 (2E,6E)-farnesyl diphosphate synthase no data 39 63
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11555 ispA farnesyl-diphosphate synthase cofit 35 75
  Dickeya dianthicola ME23 DZA65_RS05920 (2E,6E)-farnesyl diphosphate synthase no data 41 71
  Enterobacter asburiae PDN3 EX28DRAFT_2550 Geranylgeranyl pyrophosphate synthase no data 39 67
  Escherichia coli BL21 ECD_00369 geranyltranstransferase no data 41 66
  Escherichia fergusonii Becca EFB2_03636 Farnesyl diphosphate synthase no data 41 66
  Escherichia coli ECOR27 NOLOHH_01365 ispA (2E,6E)-farnesyl diphosphate synthase no data 41 66
  Escherichia coli ECOR38 HEPCGN_07045 ispA (2E,6E)-farnesyl diphosphate synthase no data 41 66
  Escherichia coli ECRC62 BNILDI_22780 ispA (2E,6E)-farnesyl diphosphate synthase no data 41 66
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03255 Farnesyl diphosphate synthase no data 41 66
  Escherichia coli BW25113 b0421 ispA geranyltranstransferase (NCBI) no data 41 66
  Escherichia coli ECRC100 OKFHMN_08415 ispA (2E,6E)-farnesyl diphosphate synthase no data 40 71
  Escherichia coli ECRC101 MCAODC_27640 ispA (2E,6E)-farnesyl diphosphate synthase no data 40 71
  Escherichia coli ECRC102 NIAGMN_06470 ispA (2E,6E)-farnesyl diphosphate synthase no data 40 71
  Escherichia coli ECRC98 JDDGAC_12070 ispA (2E,6E)-farnesyl diphosphate synthase no data 40 71
  Escherichia coli ECRC99 KEDOAH_19550 ispA (2E,6E)-farnesyl diphosphate synthase no data 40 71
  Enterobacter sp. TBS_079 MPMX20_01012 Farnesyl diphosphate synthase no data 40 67
  Klebsiella pneumoniae MRSN742743 KFA93_RS03805 ispA;go_process=isoprenoid (2E 6E)-farnesyl diphosphate synthase no data 38 78
  Escherichia coli Nissle 1917 ECOLIN_RS02540 (2E,6E)-farnesyl diphosphate synthase no data 41 66
  Pseudomonas aeruginosa MRSN321 DY961_RS27680 polyprenyl synthetase family protein no data 41 72
  Klebsiella pneumoniae MKP103 KDGMDA_14475 (2E 6E)-farnesyl diphosphate synthase no data 37 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4325 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) no data 42 66
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5576 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 40 72
  Pseudomonas stutzeri RCH2 Psest_0642 Geranylgeranyl pyrophosphate synthase no data 40 72
  Pseudomonas sp. RS175 PFR28_03936 Farnesyl diphosphate synthase no data 42 63
  Pseudomonas syringae pv. syringae B728a Psyr_0605 farnesyl-diphosphate synthase no data 40 72
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0605 farnesyl-diphosphate synthase no data 40 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4933 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 41 73
  Rhodopseudomonas palustris CGA009 TX73_002715 polyprenyl synthetase family protein no data 37 75
  Pseudomonas aeruginosa PA14 IKLFDK_20845 geranyl transferase no data 41 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS47965 farnesyl diphosphate synthase no data 41 72
  Rahnella sp. WP5 EX31_RS22160 (2E,6E)-farnesyl diphosphate synthase no data 42 70
  Pseudomonas fluorescens SBW25 PFLU_RS26840 hypothetical protein no data 41 59
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26840 hypothetical protein no data 41 59