Homologs of GFF4062 from Sphingobium sp. HT1-2

LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23)
SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase D

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 66 99
o Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 57 97
o Caulobacter crescentus NA1000 CCNA_00485 ribosomal large subunit pseudouridine synthase D strong 56 94
o Caulobacter crescentus NA1000 Δfur CCNA_00485 ribosomal large subunit pseudouridine synthase D cofit 56 94
o Xanthobacter sp. DMC5 GFF2508 Ribosomal large subunit pseudouridine synthase D insig. 56 94
o Magnetospirillum magneticum AMB-1 AMB_RS16095 RluA family pseudouridine synthase insig. 53 95
o Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 53 93
o Bosea sp. OAE506 ABIE41_RS05635 RluA family pseudouridine synthase sig. 53 94
o Sinorhizobium meliloti 1021 SMc00647 ribosomal large subunit pseudouridine synthase strong 52 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 48 98
o Agrobacterium fabrum C58 Atu2443 ribosomal large subunit pseudouridine synthase, RluD subfamily no data 52 92
o Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 51 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15205 RNA pseudouridine synthase strong 47 97
o Dinoroseobacter shibae DFL-12 Dshi_2610 pseudouridine synthase, RluA family (RefSeq) strong 53 89
o Rhodopseudomonas palustris CGA009 TX73_001905 RluA family pseudouridine synthase strong 51 93
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10060 RluA family pseudouridine synthase insig. 49 94
o Phaeobacter inhibens DSM 17395 PGA1_c09000 ribosomal large subunit pseudouridine synthase D strong 49 93
o Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 51 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 51 94
o Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 50 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 50 94
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14415 pseudouridine synthase strong 46 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03985 RluA family pseudouridine synthase sig. 44 97
o Shewanella sp. ANA-3 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) strong 51 95
o Shewanella loihica PV-4 Shew_2950 RluA family pseudouridine synthase (RefSeq) strong 51 97
o Synechocystis sp000284455 PCC 6803 SGL_RS11530 RluA family pseudouridine synthase strong 48 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 47 98
o Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 48 97
o Shewanella amazonensis SB2B Sama_2605 pseudouridylate synthase (RefSeq) no data 50 97
  Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 50 94
o Erwinia amylovora T8 OLJFJH_09725 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 97
o Dickeya dadantii 3937 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 49 97
o Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 45 96
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 45 96
o Dickeya dianthicola 67-19 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 49 97
o Dickeya dianthicola ME23 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 49 97
  Methylophilus sp. DMC18 GFF1213 Ribosomal large subunit pseudouridine synthase D insig. 48 94
o Alteromonas macleodii MIT1002 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D cofit 47 98
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 47 94
o Escherichia fergusonii Becca EFB2_01296 Ribosomal large subunit pseudouridine synthase D sig. 48 96
o Escherichia coli Nissle 1917 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 96
o Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 49 94
o Escherichia coli ECRC100 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 48 96
o Escherichia coli ECRC101 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 96
o Escherichia coli ECRC102 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 96
o Escherichia coli ECRC98 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 96
o Escherichia coli ECRC99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 48 96
o Pseudomonas aeruginosa MRSN321 DY961_RS23730 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 94
o Pseudomonas aeruginosa PA14 IKLFDK_00810 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS56195 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 49 94
o Pseudomonas fluorescens FW300-N2C3 AO356_15925 ribosomal large subunit pseudouridine synthase D strong 49 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5127 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 49 94
o Synechococcus elongatus PCC 7942 Synpcc7942_1112 ribosomal large subunit pseudouridine synthase D strong 48 93
o Escherichia coli BL21 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase strong 48 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D sig. 48 96
o Escherichia coli BW25113 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) no data 48 96
o Escherichia coli ECOR27 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 48 97
o Escherichia coli ECRC62 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 97
o Escherichia coli ECOR38 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 48 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 49 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00969 Ribosomal large subunit pseudouridine synthase D cofit 49 94
o Pseudomonas orientalis W4I3 QF045_RS06805 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 49 94
o Serratia liquefaciens MT49 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 97
o Pantoea sp. MT58 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 97
o Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 49 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 49 94
o Pseudomonas sp. DMC3 GFF4004 Ribosomal large subunit pseudouridine synthase D cofit 49 94
o Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 49 94
o Pectobacterium carotovorum WPP14 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 48 97
o Rahnella sp. WP5 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 48 97
o Pseudomonas sp. RS175 PFR28_03748 Ribosomal large subunit pseudouridine synthase D strong 49 94
o Marinobacter adhaerens HP15 HP15_527 pseudouridine synthase, RluA family strong 49 93
o Pseudomonas simiae WCS417 PS417_03820 ribosomal large subunit pseudouridine synthase D no data 48 94
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_26870 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 97
o Erwinia tracheiphila SCR3 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 47 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16540 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 47 97
o Acinetobacter baumannii LAC-4 RR41_RS15070 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 44 97
o Fusobacterium nucleatum SB010 HUW76_08575 RluA family pseudouridine synthase strong 41 97
o Pseudomonas segetis P6 ACVTMO_RS19440 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 94
o Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 48 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 48 94
o Pseudomonas sp. SVBP6 COO64_RS11055 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 49 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_03695 ribosomal large subunit pseudouridine synthase D strong 48 95
o Enterobacter asburiae PDN3 EX28DRAFT_2695 pseudouridine synthase, RluA family cofit 47 97
o Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 43 96
o Klebsiella michiganensis M5al BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase sig. 47 97
o Kangiella aquimarina DSM 16071 B158DRAFT_2532 Pseudouridylate synthases, 23S RNA-specific strong 48 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4182 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) strong 47 97
o Enterobacter sp. TBS_079 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D strong 46 98
o Klebsiella pneumoniae MKP103 KDGMDA_02140 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 47 96
o Klebsiella pneumoniae MRSN742743 KFA93_RS24575 rluD;go_function=RNA 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 47 96
o Pseudomonas putida KT2440 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase no data 47 94
o Pseudomonas sp. BP01 JOY50_RS27130 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 47 94
o Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 44 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 43 99
o Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 43 99
o Ralstonia solanacearum GMI1000 RS_RS08205 RluA family pseudouridine synthase sig. 43 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS12640 RluA family pseudouridine synthase strong 44 95
o Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 44 99
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 44 94
o Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 43 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 44 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 44 96
o Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 43 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 46 95
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 44 94
  Cupriavidus basilensis FW507-4G11 RR42_RS07590 pseudouridine synthase strong 43 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 43 94
o Herbaspirillum seropedicae SmR1 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D insig. 44 98
o Acinetobacter radioresistens SK82 MPMX26_00735 Ribosomal large subunit pseudouridine synthase D strong 43 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 45 92
o Variovorax sp. OAS795 ABID97_RS14190 RluA family pseudouridine synthase strong 46 94
o Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 41 96
o Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 44 96
o Castellaniella sp019104865 MT123 ABCV34_RS01885 RluA family pseudouridine synthase strong 44 91
  Desulfovibrio vulgaris Miyazaki F DvMF_0912 pseudouridine synthase, RluA family (RefSeq) no data 41 95
o Mycobacterium tuberculosis H37Rv Rv1540 Conserved hypothetical protein member of yabO/yceC/yfiI family no data 41 94
o Methanococcus maripaludis JJ MMJJ_RS09155 RluA family pseudouridine synthase insig. 33 97
o Methanococcus maripaludis S2 MMP_RS05225 RluA family pseudouridine synthase insig. 33 97
  Bacteroides stercoris CC31F HMPREF1181_RS16530 RluA family pseudouridine synthase insig. 36 93
  Phocaeicola dorei CL03T12C01 ABI39_RS17485 RluA family pseudouridine synthase insig. 33 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03715 RluA family pseudouridine synthase sig. 33 97
  Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 32 95
  Bacteroides ovatus ATCC 8483 BACOVA_02266 pseudouridine synthase, RluA family sig. 32 93
  Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 33 98
  Bacteroides thetaiotaomicron VPI-5482 BT0642 RNA pseudouridylate synthase (NCBI ptt file) sig. 33 93
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 39 70
  Acinetobacter baumannii LAC-4 RR41_RS16980 RluA family pseudouridine synthase sig. 33 98
  Fusobacterium nucleatum SB010 HUW76_06230 RluA family pseudouridine synthase cofit 35 74
  Bifidobacterium breve UCC2003 BBR_RS17135 RluA family pseudouridine synthase strong 37 94
  Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 33 92
  Rhodanobacter denitrificans MT42 LRK55_RS17750 RluA family pseudouridine synthase strong 33 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17895 RluA family pseudouridine synthase strong 33 99
  Rhodanobacter sp. FW510-T8 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase sig. 33 99
  Xanthobacter sp. DMC5 GFF1347 Ribosomal large subunit pseudouridine synthase C insig. 32 98
  Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 29 99
  Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 31 96
  Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 33 91
  Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 32 95
  Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 31 96
  Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 31 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 30 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 32 98
  Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 31 98
  Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 30 98
  Pseudomonas stutzeri RCH2 Psest_2948 pseudouridine synthase, RluA family sig. 39 70
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 33 82
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 32 98
  Pseudomonas sp. RS175 PFR28_03154 Dual-specificity RNA pseudouridine synthase RluA insig. 37 69
  Dinoroseobacter shibae DFL-12 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) insig. 32 98
  Pseudomonas sp. BP01 JOY50_RS16355 RluA family pseudouridine synthase insig. 38 70
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 37 70
  Pseudomonas sp. DMC3 GFF2599 Dual-specificity RNA pseudouridine synthase RluA insig. 37 69
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 31 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3753 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) sig. 36 69
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 36 69
  Pseudomonas segetis P6 ACVTMO_RS15920 RluA family pseudouridine synthase insig. 37 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5794 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) strong 36 69
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02725 RluA family pseudouridine synthase sig. 32 91
  Shewanella amazonensis SB2B Sama_1988 pseudouridylate synthase (RefSeq) strong 30 97
  Pseudomonas fluorescens FW300-N2E3 AO353_02385 pseudouridine synthase no data 36 69
  Magnetospirillum magneticum AMB-1 AMB_RS15620 RluA family pseudouridine synthase cofit 33 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4194 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 36 69
  Azospirillum brasilense Sp245 AZOBR_RS06905 pseudouridine synthase strong 32 91
  Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 30 98
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 36 70
  Sphingobium sp. HT1-2 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) cofit 35 87
  Pantoea sp. MT58 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 32 99
  Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 30 99
  Acinetobacter baumannii LAC-4 RR41_RS05195 RluA family pseudouridine synthase insig. 35 69
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 30 98
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 32 92
  Bacteroides stercoris CC31F HMPREF1181_RS13725 RNA pseudouridine synthase insig. 40 66
  Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 31 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase insig. 31 98
  Pseudomonas aeruginosa MRSN321 DY961_RS00685 RluA family pseudouridine synthase insig. 38 69
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 38 69
  Phocaeicola dorei CL03T12C01 ABI39_RS18705 RluA family pseudouridine synthase insig. 38 68
  Pseudomonas aeruginosa PUPa3 DQ20_RS40350 RluA family pseudouridine synthase insig. 38 69
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05230 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 32 99
  Pseudomonas syringae pv. syringae B728a Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 35 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 35 69
  Pseudomonas aeruginosa PA14 IKLFDK_16600 RNA pseudouridine synthase insig. 38 69
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 37 70
  Lysobacter sp. OAE881 ABIE51_RS11800 RluA family pseudouridine synthase cofit 35 95
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 35 69
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 35 69
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11465 RluA family pseudouridine synthase no data 32 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04097 Dual-specificity RNA pseudouridine synthase RluA cofit 35 69
  Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 34 90
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05180 RluA family pseudouridine synthase insig. 36 68
  Pseudomonas orientalis W4I3 QF045_RS21620 RluA family pseudouridine synthase insig. 35 69
  Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 31 99
  Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 31 99
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 34 69
  Castellaniella sp019104865 MT123 ABCV34_RS08415 RluA family pseudouridine synthase sig. 34 98
  Klebsiella pneumoniae MKP103 KDGMDA_18660 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 31 99
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13190 RluA family pseudouridine synthase insig. 32 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 31 99
  Klebsiella pneumoniae MRSN742743 KFA93_RS00230 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 99
  Erwinia amylovora T8 OLJFJH_15565 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 32 99
  Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 31 99
  Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 31 99
  Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 99
  Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 99
  Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 31 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 31 99
  Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 99
  Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 31 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) sig. 32 98
  Escherichia coli ECRC100 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 99
  Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 99
  Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 31 99
  Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 31 99
  Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 31 99
  Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 32 99
  Pectobacterium carotovorum WPP14 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 31 99
  Enterobacter asburiae PDN3 EX28DRAFT_1844 pseudouridine synthase, RluA family insig. 30 99
  Pseudomonas segetis P6 ACVTMO_RS10270 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 33 90
  Enterobacter sp. TBS_079 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C sig. 32 96
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 36 71
  Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 32 97
  Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 30 98
  Cupriavidus basilensis FW507-4G11 RR42_RS14155 pseudouridine synthase strong 30 98
  Dinoroseobacter shibae DFL-12 Dshi_3106 pseudouridine synthase (RefSeq) insig. 38 70
  Pseudomonas syringae pv. syringae B728a Psyr_1639 ribosomal large subunit pseudouridine synthase C sig. 33 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1639 ribosomal large subunit pseudouridine synthase C insig. 33 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS10090 RluA family pseudouridine synthase sig. 29 99
  Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 32 92
  Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 32 92
  Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 34 73
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00715 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 32 97
  Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 31 98
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 38 69
  Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 35 70
  Pseudomonas sp. DMC3 GFF4765 Ribosomal large subunit pseudouridine synthase C cofit 33 90
  Marinobacter adhaerens HP15 HP15_2221 pseudouridine synthase, RluA family sig. 32 96
  Herbaspirillum seropedicae SmR1 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C strong 30 98
  Pseudomonas fluorescens FW300-N2C3 AO356_20125 23S rRNA pseudouridylate synthase strong 33 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14375 RluA family pseudouridine synthase strong 30 97
  Ralstonia solanacearum UW163 UW163_RS11840 RluA family pseudouridine synthase insig. 30 97
  Magnetospirillum magneticum AMB-1 AMB_RS19265 RNA pseudouridine synthase cofit 36 56
  Pseudomonas fluorescens SBW25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 32 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 32 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04440 Ribosomal large subunit pseudouridine synthase C cofit 32 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 32 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17840 RluA family pseudouridine synthase insig. 32 73