Homologs of Psest_0400 from Pseudomonas stutzeri RCH2

Geranylgeranyl pyrophosphate synthase
SEED: Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
KEGG: geranylgeranyl diphosphate synthase, type II

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_0400 Geranylgeranyl pyrophosphate synthase insig. 100 100
o Pantoea sp. MT58 IAI47_20650 polyprenyl synthetase family protein insig. 54 88
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04395 polyprenyl synthetase family protein insig. 44 86
  Azospirillum brasilense Sp245 AZOBR_RS20795 farnesyl-diphosphate synthase no data 39 83
  Synechococcus elongatus PCC 7942 Synpcc7942_0776 crtE farnesyl-diphosphate synthase no data 41 84
  Azospirillum sp. SherDot2 MPMX19_05065 Farnesyl diphosphate synthase insig. 36 89
  Rhodospirillum rubrum S1H Rru_A2618 Polyprenyl synthetase (NCBI) no data 38 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1008 Geranylgeranyl pyrophosphate synthase strong 37 88
  Lysobacter sp. OAE881 ABIE51_RS06815 (2E,6E)-farnesyl diphosphate synthase strong 41 87
  Shewanella oneidensis MR-1 SO1526 ispA geranyltranstransferase (NCBI ptt file) no data 36 84
  Erwinia tracheiphila SCR3 LU632_RS18835 ispA (2E,6E)-farnesyl diphosphate synthase no data 39 84
  Shewanella amazonensis SB2B Sama_2435 geranyltranstransferase (RefSeq) strong 40 75
  Fusobacterium nucleatum SB010 HUW76_03605 polyprenyl synthetase family protein cofit 33 82
  Dechlorosoma suillum PS Dsui_3509 geranylgeranyl pyrophosphate synthase no data 36 95
  Marinobacter adhaerens HP15 HP15_581 geranyltranstransferase no data 38 91
  Shewanella loihica PV-4 Shew_2770 polyprenyl synthetase (RefSeq) sig. 34 89
  Pantoea sp. MT58 IAI47_14735 (2E,6E)-farnesyl diphosphate synthase no data 40 78
  Castellaniella sp019104865 MT123 ABCV34_RS02230 polyprenyl synthetase family protein no data 35 88
  Paraburkholderia graminis OAS925 ABIE53_004858 farnesyl diphosphate synthase strong 37 85
  Variovorax sp. SCN45 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) cofit 40 75
  Rhodanobacter sp. FW510-T8 OKGIIK_10250 ispA geranyl transferase no data 39 82
  Vibrio cholerae E7946 ATCC 55056 CSW01_04565 (2E,6E)-farnesyl diphosphate synthase no data 37 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06016 farnesyl-diphosphate synthase no data 37 85
  Magnetospirillum magneticum AMB-1 AMB_RS14610 polyprenyl synthetase family protein no data 40 95
  Caulobacter crescentus NA1000 CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 38 84
  Caulobacter crescentus NA1000 Δfur CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 38 84
  Burkholderia phytofirmans PsJN BPHYT_RS33580 geranyltranstransferase strong 37 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS15640 polyprenyl synthetase family protein no data 40 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1890.1 hypothetical protein sig. 38 84
  Rhodanobacter denitrificans MT42 LRK55_RS03115 polyprenyl synthetase family protein insig. 38 83
  Shewanella sp. ANA-3 Shewana3_2900 farnesyl-diphosphate synthase (RefSeq) no data 36 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS03365 polyprenyl synthetase family protein sig. 37 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03710 (2E,6E)-farnesyl diphosphate synthase no data 39 77
  Ralstonia solanacearum UW163 UW163_RS09960 (2E,6E)-farnesyl diphosphate synthase no data 39 77
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09695 polyprenyl synthetase family protein cofit 38 85
  Pseudomonas sp. S08-1 OH686_15785 (2E,6E)-farnesyl diphosphate synthase no data 39 89
  Agrobacterium fabrum C58 Atu2721 geranyltranstransferase no data 40 75
  Ralstonia solanacearum PSI07 RPSI07_RS13520 polyprenyl synthetase family protein no data 40 73
  Variovorax sp. OAS795 ABID97_RS09275 polyprenyl synthetase family protein strong 40 75
  Ralstonia solanacearum GMI1000 RS_RS11155 polyprenyl synthetase family protein no data 39 77
  Dickeya dianthicola ME23 DZA65_RS05920 (2E,6E)-farnesyl diphosphate synthase no data 42 79
  Pectobacterium carotovorum WPP14 HER17_RS15930 (2E,6E)-farnesyl diphosphate synthase no data 39 84
  Dickeya dianthicola 67-19 HGI48_RS05595 (2E,6E)-farnesyl diphosphate synthase no data 42 79
  Erwinia tracheiphila SCR3 LU632_RS23555 polyprenyl synthetase family protein insig. 35 82
  Rhizobium sp. OAE497 ABIE40_RS18720 polyprenyl synthetase family protein insig. 38 84
  Sinorhizobium meliloti 1021 SMc03884 geranyltranstransferase no data 40 75
  Serratia liquefaciens MT49 IAI46_04930 (2E,6E)-farnesyl diphosphate synthase no data 40 84
  Dickeya dadantii 3937 DDA3937_RS05535 (2E,6E)-farnesyl diphosphate synthase no data 42 79
  Pseudomonas putida KT2440 PP_0528 farnesyl diphosphate synthase no data 38 92
  Acidovorax sp. GW101-3H11 Ac3H11_3565 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 38 78
  Rhodopseudomonas palustris CGA009 TX73_002715 polyprenyl synthetase family protein no data 36 82
  Herbaspirillum seropedicae SmR1 HSERO_RS19130 geranyl transferase no data 37 73
  Pseudomonas syringae pv. syringae B728a Psyr_0605 farnesyl-diphosphate synthase no data 39 82
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0605 farnesyl-diphosphate synthase no data 39 82
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS21690 farnesyl diphosphate synthase no data 36 83
  Pseudomonas stutzeri RCH2 Psest_0642 Geranylgeranyl pyrophosphate synthase no data 37 87
  Alteromonas macleodii MIT1002 MIT1002_02692 Farnesyl diphosphate synthase no data 36 78
  Bosea sp. OAE506 ABIE41_RS08680 polyprenyl synthetase family protein no data 39 75
  Escherichia coli BL21 ECD_00369 geranyltranstransferase no data 36 86
  Escherichia fergusonii Becca EFB2_03636 Farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECOR27 NOLOHH_01365 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECOR38 HEPCGN_07045 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECRC101 OKFHMN_08415 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECRC101 MCAODC_27640 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECRC102 NIAGMN_06470 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECRC62 BNILDI_22780 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECRC98 JDDGAC_12070 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli ECRC99 KEDOAH_19550 ispA (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03255 Farnesyl diphosphate synthase no data 36 86
  Escherichia coli Nissle 1917 ECOLIN_RS02540 (2E,6E)-farnesyl diphosphate synthase no data 36 86
  Escherichia coli BW25113 b0421 ispA geranyltranstransferase (NCBI) no data 36 86
  Rahnella sp. WP5 EX31_RS22160 (2E,6E)-farnesyl diphosphate synthase no data 38 88
  Enterobacter sp. TBS_079 MPMX20_01012 Farnesyl diphosphate synthase no data 38 79
  Pseudomonas sp. RS175 PFR28_03936 Farnesyl diphosphate synthase no data 40 76
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4325 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) no data 38 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1326 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) no data 39 82
  Enterobacter asburiae PDN3 EX28DRAFT_2550 Geranylgeranyl pyrophosphate synthase no data 39 75
  Pseudomonas fluorescens FW300-N2E3 AO353_06650 geranyl transferase no data 39 82
  Klebsiella michiganensis M5al BWI76_RS06385 (2E,6E)-farnesyl diphosphate synthase no data 36 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10535 isoprenyl synthetase no data 32 74
  Pseudomonas fluorescens FW300-N2C3 AO356_14995 geranyl transferase no data 39 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2662 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 38 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS15235 polyprenyl synthetase family protein no data 36 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04265 polyprenyl synthetase family protein no data 32 84
  Bosea sp. OAE506 ABIE41_RS09875 polyprenyl synthetase family protein insig. 37 69
  Kangiella aquimarina DSM 16071 B158DRAFT_1919 farnesyl-diphosphate synthase (EC 2.5.1.10) no data 33 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4933 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 39 82
  Acinetobacter radioresistens SK82 MPMX26_00661 Farnesyl diphosphate synthase no data 30 98
  Dinoroseobacter shibae DFL-12 Dshi_3295 Polyprenyl synthetase (RefSeq) insig. 37 83
  Phocaeicola dorei CL03T12C01 ABI39_RS09855 polyprenyl synthetase family protein strong 33 72
  Bacteroides thetaiotaomicron VPI-5482 BT2058 putative isoprenyl synthetase (NCBI ptt file) no data 33 66
  Mycobacterium tuberculosis H37Rv Rv3398c Probable multifunctional geranylgeranyl pyrophosphate synthetase IdsA1 (GGPP synthetase) (ggppsase) (geranylgeranyl diphosphate synthase): dimethylallyltransferase (prenyltransferase) (geranyl-diphosphate synthase) + geranyltranstransferase (farnesyl-diphosphate synthase) (farnesyl-pyrophosphate synthetase) (farnesyl diphosphate synthetase) (FPP synthetase) + farnesyltranstransferase (geranylgeranyl-diphosphate synthase) no data 36 66
  Variovorax sp. OAS795 ABID97_RS23420 polyprenyl synthetase family protein no data 34 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5576 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 38 79
  Cupriavidus basilensis FW507-4G11 RR42_RS15010 geranyl transferase no data 38 77
  Pseudomonas fluorescens SBW25 PFLU_RS26840 hypothetical protein no data 37 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26840 hypothetical protein no data 37 68
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17360 geranyl transferase no data 33 72
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14225 polyprenyl synthetase family protein strong 32 66
  Dinoroseobacter shibae DFL-12 Dshi_3072 Polyprenyl synthetase (RefSeq) no data 34 67