Homologs of GFF2222 from Xanthobacter sp. DMC5

Farnesyl diphosphate synthase
SEED: Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
KEGG: farnesyl diphosphate synthase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2222 Farnesyl diphosphate synthase insig. 100 100
o Rhodopseudomonas palustris CGA009 TX73_002715 polyprenyl synthetase family protein no data 59 90
o Azospirillum sp. SherDot2 MPMX19_05065 Farnesyl diphosphate synthase insig. 58 82
o Bosea sp. OAE506 ABIE41_RS08680 polyprenyl synthetase family protein no data 64 85
o Azospirillum brasilense Sp245 AZOBR_RS20795 farnesyl-diphosphate synthase no data 55 85
  Rhodospirillum rubrum S1H Rru_A2618 Polyprenyl synthetase (NCBI) no data 55 79
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1008 Geranylgeranyl pyrophosphate synthase strong 54 78
  Sphingobium sp. HT1-2 GFF2400 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) cofit 54 78
o Agrobacterium fabrum C58 Atu2721 geranyltranstransferase no data 56 89
o Sinorhizobium meliloti 1021 SMc03884 geranyltranstransferase no data 57 89
o Magnetospirillum magneticum AMB-1 AMB_RS14610 polyprenyl synthetase family protein no data 55 82
o Lysobacter sp. OAE881 ABIE51_RS06815 (2E,6E)-farnesyl diphosphate synthase strong 51 81
  Shewanella amazonensis SB2B Sama_2435 geranyltranstransferase (RefSeq) strong 51 78
  Shewanella oneidensis MR-1 SO1526 ispA geranyltranstransferase (NCBI ptt file) no data 46 78
  Synechocystis sp000284455 PCC 6803 SGL_RS02445 polyprenyl synthetase family protein no data 46 79
o Rhizobium sp. OAE497 ABIE40_RS18720 polyprenyl synthetase family protein insig. 54 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09695 polyprenyl synthetase family protein cofit 51 79
  Shewanella loihica PV-4 Shew_2770 polyprenyl synthetase (RefSeq) sig. 45 78
o Dinoroseobacter shibae DFL-12 Dshi_3295 Polyprenyl synthetase (RefSeq) insig. 58 84
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06600 polyprenyl synthetase family protein insig. 51 82
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06016 farnesyl-diphosphate synthase no data 50 81
o Rhodanobacter sp. FW510-T8 OKGIIK_10250 ispA geranyl transferase no data 50 82
o Paraburkholderia graminis OAS925 ABIE53_004858 farnesyl diphosphate synthase strong 49 84
  Marinobacter adhaerens HP15 HP15_581 geranyltranstransferase no data 49 78
o Burkholderia phytofirmans PsJN BPHYT_RS33580 geranyltranstransferase strong 49 81
o Caulobacter crescentus NA1000 CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 48 89
o Caulobacter crescentus NA1000 Δfur CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 48 89
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1890.1 hypothetical protein sig. 49 82
o Herbaspirillum seropedicae SmR1 HSERO_RS19130 geranyl transferase no data 48 81
o Synechococcus elongatus PCC 7942 Synpcc7942_0776 crtE farnesyl-diphosphate synthase no data 46 89
o Rhodanobacter denitrificans MT42 LRK55_RS03115 polyprenyl synthetase family protein insig. 51 82
o Fusobacterium nucleatum SB010 HUW76_03605 polyprenyl synthetase family protein cofit 38 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03365 polyprenyl synthetase family protein sig. 51 82
o Dechlorosoma suillum PS Dsui_3509 geranylgeranyl pyrophosphate synthase no data 45 85
  Shewanella sp. ANA-3 Shewana3_2900 farnesyl-diphosphate synthase (RefSeq) no data 46 78
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21690 farnesyl diphosphate synthase no data 51 81
o Castellaniella sp019104865 MT123 ABCV34_RS02230 polyprenyl synthetase family protein no data 46 85
o Phaeobacter inhibens DSM 17395 PGA1_c34160 geranyltranstransferase IspA no data 51 85
  Variovorax sp. SCN45 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) cofit 52 69
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26035 ispA (2E 6E)-farnesyl diphosphate synthase no data 48 68
  Erwinia tracheiphila SCR3 LU632_RS18835 ispA (2E,6E)-farnesyl diphosphate synthase no data 48 68
o Pseudomonas syringae pv. syringae B728a Psyr_0605 farnesyl-diphosphate synthase no data 49 85
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0605 farnesyl-diphosphate synthase no data 49 85
  Erwinia amylovora T8 OLJFJH_18060 (2E 6E)-farnesyl diphosphate synthase no data 48 74
  Pseudomonas sp. S08-1 OH686_15785 (2E,6E)-farnesyl diphosphate synthase no data 49 79
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10460 (2E,6E)-farnesyl diphosphate synthase no data 48 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03710 (2E,6E)-farnesyl diphosphate synthase no data 52 73
  Ralstonia solanacearum UW163 UW163_RS09960 (2E,6E)-farnesyl diphosphate synthase no data 52 73
  Pantoea sp. MT58 IAI47_14735 (2E,6E)-farnesyl diphosphate synthase no data 50 68
  Ralstonia solanacearum PSI07 RPSI07_RS13520 polyprenyl synthetase family protein no data 52 73
o Pseudomonas segetis P6 ACVTMO_RS04985 ispA (2E,6E)-farnesyl diphosphate synthase no data 46 87
o Cupriavidus basilensis FW507-4G11 RR42_RS15010 geranyl transferase no data 49 85
o Pseudomonas sp. DMC3 GFF3840 Farnesyl diphosphate synthase no data 47 87
  Pseudomonas stutzeri RCH2 Psest_0642 Geranylgeranyl pyrophosphate synthase no data 48 79
  Vibrio cholerae E7946 ATCC 55056 CSW01_04565 (2E,6E)-farnesyl diphosphate synthase no data 46 78
o Pseudomonas sp. BP01 JOY50_RS20060 ispA (2E,6E)-farnesyl diphosphate synthase no data 47 82
o Ralstonia sp. UNC404CL21Col ABZR87_RS15640 polyprenyl synthetase family protein no data 51 73
  Variovorax sp. OAS795 ABID97_RS09275 polyprenyl synthetase family protein strong 51 69
o Pseudomonas putida KT2440 PP_0528 farnesyl diphosphate synthase no data 46 82
  Ralstonia solanacearum GMI1000 RS_RS11155 polyprenyl synthetase family protein no data 52 70
o Paraburkholderia sabiae LMG 24235 QEN71_RS15235 polyprenyl synthetase family protein no data 47 84
o Pseudomonas sp. SVBP6 COO64_RS15825 ispA (2E,6E)-farnesyl diphosphate synthase no data 47 82
o Pseudomonas fluorescens SBW25 PFLU_RS26840 hypothetical protein no data 46 87
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26840 hypothetical protein no data 46 87
  Serratia liquefaciens MT49 IAI46_04930 (2E,6E)-farnesyl diphosphate synthase no data 50 68
o Methylophilus sp. DMC18 GFF1700 Farnesyl diphosphate synthase no data 44 81
  Pseudomonas fluorescens FW300-N2C3 AO356_14995 geranyl transferase no data 49 79
  Acidovorax sp. GW101-3H11 Ac3H11_3565 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 48 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1326 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) no data 48 79
o Kangiella aquimarina DSM 16071 B158DRAFT_1919 farnesyl-diphosphate synthase (EC 2.5.1.10) no data 45 81
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2662 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 47 87
  Pseudomonas sp. RS175 PFR28_03936 Farnesyl diphosphate synthase no data 49 79
  Escherichia coli ECRC100 OKFHMN_08415 ispA (2E,6E)-farnesyl diphosphate synthase no data 49 71
  Escherichia coli ECRC101 MCAODC_27640 ispA (2E,6E)-farnesyl diphosphate synthase no data 49 71
  Escherichia coli ECRC102 NIAGMN_06470 ispA (2E,6E)-farnesyl diphosphate synthase no data 49 71
  Escherichia coli ECRC98 JDDGAC_12070 ispA (2E,6E)-farnesyl diphosphate synthase no data 49 71
  Escherichia coli ECRC99 KEDOAH_19550 ispA (2E,6E)-farnesyl diphosphate synthase no data 49 71
o Desulfovibrio vulgaris Hildenborough JW710 DVU1349 SelGGPS geranylgeranyl diphosphate synthase (TIGR) insig. 47 86
  Escherichia coli BL21 ECD_00369 geranyltranstransferase no data 49 71
  Escherichia coli ECOR27 NOLOHH_01365 ispA (2E,6E)-farnesyl diphosphate synthase no data 49 71
  Escherichia coli ECOR38 HEPCGN_07045 ispA (2E,6E)-farnesyl diphosphate synthase no data 49 71
  Escherichia coli BW25113 b0421 ispA geranyltranstransferase (NCBI) no data 49 71
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4933 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 47 87
o Pectobacterium carotovorum WPP14 HER17_RS15930 (2E,6E)-farnesyl diphosphate synthase no data 46 81
  Escherichia fergusonii Becca EFB2_03636 Farnesyl diphosphate synthase no data 49 71
  Pseudomonas fluorescens FW300-N2E3 AO353_06650 geranyl transferase no data 48 79
o Pseudomonas aeruginosa MRSN321 DY961_RS27680 polyprenyl synthetase family protein no data 45 87
  Acinetobacter radioresistens SK82 MPMX26_00661 Farnesyl diphosphate synthase no data 42 79
  Escherichia coli ECRC62 BNILDI_22780 ispA (2E,6E)-farnesyl diphosphate synthase no data 48 71
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03255 Farnesyl diphosphate synthase no data 48 71
  Acinetobacter baumannii LAC-4 RR41_RS03725 polyprenyl synthetase family protein no data 40 79
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11555 ispA farnesyl-diphosphate synthase cofit 46 78
  Erwinia tracheiphila SCR3 LU632_RS23555 polyprenyl synthetase family protein insig. 46 78
  Escherichia coli Nissle 1917 ECOLIN_RS02540 (2E,6E)-farnesyl diphosphate synthase no data 48 71
  Dickeya dadantii 3937 DDA3937_RS05535 (2E,6E)-farnesyl diphosphate synthase no data 49 72
  Klebsiella michiganensis M5al BWI76_RS06385 (2E,6E)-farnesyl diphosphate synthase no data 47 74
o Pseudomonas orientalis W4I3 QF045_RS27170 (2E,6E)-farnesyl diphosphate synthase no data 47 87
  Rahnella sp. WP5 EX31_RS22160 (2E,6E)-farnesyl diphosphate synthase no data 48 74
o Desulfovibrio vulgaris Miyazaki F DvMF_0125 Polyprenyl synthetase (RefSeq) sig. 48 89
  Dickeya dianthicola ME23 DZA65_RS05920 (2E,6E)-farnesyl diphosphate synthase no data 47 78