Homologs of CSW01_07545 from Vibrio cholerae E7946 ATCC 55056

16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
SEED: Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase F

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF cofit 100 100
o Escherichia coli ECRC101 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 57 93
o Escherichia coli ECRC100 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 57 93
o Escherichia coli ECRC102 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 57 93
o Escherichia coli ECRC98 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF cofit 57 93
o Escherichia coli ECRC99 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 57 93
o Escherichia coli ECOR38 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 57 93
o Escherichia coli ECRC62 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF cofit 57 93
o Escherichia coli BL21 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent no data 57 93
o Escherichia coli ECOR27 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 57 93
o Escherichia coli Nissle 1917 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 57 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F insig. 57 93
o Escherichia coli BW25113 b1835 yebU putative nucleolar proteins (VIMSS) strong 57 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) sig. 53 99
o Escherichia fergusonii Becca EFB2_02166 Ribosomal RNA small subunit methyltransferase F insig. 56 93
o Enterobacter asburiae PDN3 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase insig. 57 93
o Pantoea sp. MT58 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF strong 57 93
o Enterobacter sp. TBS_079 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F insig. 57 91
o Serratia liquefaciens MT49 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 57 93
o Dickeya dadantii 3937 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 57 92
o Pectobacterium carotovorum WPP14 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 57 92
o Dickeya dianthicola 67-19 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 56 92
o Klebsiella michiganensis M5al BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF sig. 56 93
o Erwinia amylovora T8 OLJFJH_12985 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 55 94
o Dickeya dianthicola ME23 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 55 92
o Rahnella sp. WP5 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF sig. 55 92
o Shewanella sp. ANA-3 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) insig. 55 94
o Shewanella oneidensis MR-1 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) insig. 55 93
o Shewanella loihica PV-4 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) insig. 53 93
o Shewanella amazonensis SB2B Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) sig. 50 92
o Kangiella aquimarina DSM 16071 B158DRAFT_0839 NOL1/NOP2/sun family putative RNA methylase insig. 49 93
o Bacteroides thetaiotaomicron VPI-5482 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) sig. 28 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05610 rRNA methyltransferase strong 30 92
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00225 RNA methyltransferase strong 29 92
o Bacteroides stercoris CC31F HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase insig. 28 92
o Bacteroides ovatus ATCC 8483 BACOVA_00671 NOL1/NOP2/sun family protein insig. 27 92
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1153 tRNA and rRNA cytosine-C5-methylases insig. 28 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase insig. 28 92
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14300 rRNA cytosine-C5-methyltransferase sig. 29 92
o Phocaeicola dorei CL03T12C01 ABI39_RS09930 rRNA cytosine-C5-methyltransferase sig. 28 92
  Methanococcus maripaludis S2 MMP_RS05815 NOL1/NOP2/sun family putative RNA methylase strong 36 53
  Methanococcus maripaludis JJ MMJJ_RS08535 NOL1/NOP2/sun family putative RNA methylase strong 35 54
  Desulfovibrio vulgaris Hildenborough JW710 DVU3189 NOL1/NOP2/sun family protein (TIGR) insig. 33 62
  Herbaspirillum seropedicae SmR1 HSERO_RS05915 SAM-dependent methyltransferase sig. 28 57
o Desulfovibrio vulgaris Miyazaki F DvMF_2026 Fmu (Sun) domain protein (RefSeq) insig. 27 82
  Rhodospirillum rubrum S1H Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) cofit 34 44
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 33 43
  Acidovorax sp. GW101-3H11 Ac3H11_1706 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 30 53
  Dechlorosoma suillum PS Dsui_1543 tRNA/rRNA cytosine-C5-methylase sig. 30 55
  Magnetospirillum magneticum AMB-1 AMB_RS19160 methyltransferase domain-containing protein cofit 31 54
  Methylophilus sp. DMC18 GFF2298 Ribosomal RNA small subunit methyltransferase B insig. 30 54
  Fusobacterium nucleatum SB010 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 33 49
  Synechococcus elongatus PCC 7942 Synpcc7942_0962 sun sun protein sig. 31 43
  Synechocystis sp000284455 PCC 6803 SGL_RS03855 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB sig. 31 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04755 SAM-dependent methyltransferase strong 28 54
  Ralstonia solanacearum UW163 UW163_RS08915 SAM-dependent methyltransferase insig. 28 54
  Ralstonia solanacearum GMI1000 RS_RS12315 SAM-dependent methyltransferase sig. 28 54
  Variovorax sp. OAS795 ABID97_RS07795 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 29 59
  Caulobacter crescentus NA1000 CCNA_00101 16S rRNA m5C methyltransferase RsmB sig. 36 43
  Caulobacter crescentus NA1000 Δfur CCNA_00101 16S rRNA m5C methyltransferase RsmB cofit 36 43
  Castellaniella sp019104865 MT123 ABCV34_RS05220 RsmB/NOP family class I SAM-dependent RNA methyltransferase cofit 29 60
  Ralstonia solanacearum PSI07 RPSI07_RS12630 SAM-dependent methyltransferase insig. 28 54
  Ralstonia sp. UNC404CL21Col ABZR87_RS00375 RsmB/NOP family class I SAM-dependent RNA methyltransferase sig. 32 38
  Variovorax sp. SCN45 GFF6043 tRNA/rRNA cytosine-C5-methylase insig. 29 59
  Azospirillum sp. SherDot2 MPMX19_01594 Ribosomal RNA small subunit methyltransferase B insig. 27 54
  Dickeya dadantii 3937 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 31 53
  Xanthobacter sp. DMC5 GFF4611 Ribosomal RNA small subunit methyltransferase B insig. 28 62
  Dinoroseobacter shibae DFL-12 Dshi_3033 Fmu (Sun) domain protein (RefSeq) sig. 34 43
  Bosea sp. OAE506 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 31 43
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF769 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 30 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS03045 RsmB/NOP family class I SAM-dependent RNA methyltransferase strong 27 57
  Caulobacter crescentus NA1000 CCNA_01691 tRNA/rRNA methyltransferase strong 30 54
  Caulobacter crescentus NA1000 Δfur CCNA_01691 tRNA/rRNA methyltransferase cofit 30 54
  Klebsiella michiganensis M5al BWI76_RS25680 16S rRNA m5C967 methyltransferase strong 33 46
  Shewanella amazonensis SB2B Sama_0041 sun protein (RefSeq) strong 32 38
  Azospirillum sp. SherDot2 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B insig. 32 45
  Pantoea sp. MT58 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 32 43
  Dickeya dianthicola 67-19 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 31 43
  Dickeya dianthicola ME23 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 31 43
  Cellulophaga baltica 18 M666_RS18250 methyltransferase domain-containing protein insig. 30 54
  Azospirillum brasilense Sp245 AZOBR_RS00235 MFS transporter sig. 32 43
  Rhodopseudomonas palustris CGA009 TX73_000155 transcription antitermination factor NusB insig. 33 43
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 cofit 31 46
  Phaeobacter inhibens DSM 17395 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B sig. 31 43
  Magnetospirillum magneticum AMB-1 AMB_RS00745 MFS transporter insig. 34 40
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04074 16S rRNA (cytosine967-C5)-methyltransferase insig. 27 61
  Enterobacter asburiae PDN3 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 32 43
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4741.1 hypothetical protein insig. 29 53
  Burkholderia phytofirmans PsJN BPHYT_RS15665 SAM-dependent methyltransferase no data 27 53
  Paraburkholderia graminis OAS925 ABIE53_003297 16S rRNA (cytosine967-C5)-methyltransferase insig. 27 53
  Cupriavidus basilensis FW507-4G11 RR42_RS17045 SAM-dependent methyltransferase sig. 26 55
  Shewanella oneidensis MR-1 SO2215 sun protein, putative (NCBI ptt file) sig. 29 56
  Xanthobacter sp. DMC5 GFF3851 Ribosomal RNA small subunit methyltransferase B no data 32 38
  Shewanella sp. ANA-3 Shewana3_0033 sun protein (RefSeq) strong 32 38
  Sinorhizobium meliloti 1021 SMc00403 NOL1/NOP2/SUN family signature protein strong 29 61
  Rhodanobacter sp. FW510-T8 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 26 53
  Shewanella oneidensis MR-1 SO0030 sun sun protein (NCBI ptt file) sig. 31 38
  Enterobacter sp. TBS_079 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B sig. 32 43
  Agrobacterium fabrum C58 Atu0289 Sun protein insig. 28 57
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0881 tRNA and rRNA cytosine-C5-methylases insig. 32 53