| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Agrobacterium fabrum C58 | Atu3710 | | metalloprotease | no data | 100 | 100 |
| o | Rhizobium sp. OAE497 | ABIE40_RS15580 | | ATP-dependent zinc metalloprotease FtsH | no data | 93 | 100 |
| o | Sinorhizobium meliloti 1021 | SMc04459 | | metalloprotease transmembrane protein | no data | 87 | 100 |
| o | Bosea sp. OAE506 | ABIE41_RS09560 | | ATP-dependent zinc metalloprotease FtsH | no data | 70 | 100 |
| o | Xanthobacter sp. DMC5 | GFF97 | | ATP-dependent zinc metalloprotease FtsH | no data | 72 | 100 |
| o | Rhodopseudomonas palustris CGA009 | TX73_005785 | | ATP-dependent zinc metalloprotease FtsH | no data | 72 | 100 |
| o | Caulobacter crescentus NA1000 | CCNA_03334 | | cell division protein FtsH | no data | 71 | 93 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_03334 | | cell division protein FtsH | no data | 71 | 93 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS07570 | | ATP-dependent metalloprotease | no data | 68 | 100 |
| o | Azospirillum sp. SherDot2 | MPMX19_00707 | | ATP-dependent zinc metalloprotease FtsH | no data | 67 | 100 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15945 | | ATP-dependent zinc metalloprotease FtsH | no data | 72 | 88 |
| o | Rhodospirillum rubrum S1H | Rru_A1098 | | Peptidase M41, FtsH (NCBI) | no data | 65 | 99 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_1115 | | ATP-dependent metalloprotease FtsH (RefSeq) | no data | 64 | 99 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2510 | | ATP-dependent metalloprotease FtsH | no data | 65 | 92 |
| o | Escherichia coli ECRC100 | OKFHMN_18060 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Escherichia coli ECRC101 | MCAODC_08580 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Escherichia coli ECRC102 | NIAGMN_15820 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Escherichia coli ECRC98 | JDDGAC_21685 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Escherichia coli ECRC99 | KEDOAH_10090 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Escherichia coli BL21 | ECD_03043 | | protease, ATP-dependent zinc-metallo | no data | 60 | 97 |
| o | Escherichia fergusonii Becca | EFB2_00645 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 97 |
| o | Escherichia coli ECOR27 | NOLOHH_09860 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 97 |
| o | Escherichia coli ECOR38 | HEPCGN_16935 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 97 |
| o | Escherichia coli ECRC62 | BNILDI_01675 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 97 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00522 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 97 |
| o | Escherichia coli BW25113 | b3178 | ftsH | protease, ATP-dependent zinc-metallo (NCBI) | no data | 60 | 97 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_3229 | | ATP-dependent metalloprotease FtsH | no data | 60 | 96 |
| o | Klebsiella michiganensis M5al | BWI76_RS25140 | | ATP-dependent metalloprotease | no data | 60 | 96 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_05960 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Klebsiella pneumoniae MRSN742743 | KFA93_RS13215 | ftsH;go_function=ATP-dependent | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Pantoea sp. MT58 | IAI47_17065 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Enterobacter sp. TBS_079 | MPMX20_04082 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Sphingobium sp. HT1-2 | GFF2002 | | Cell division-associated, ATP-dependent zinc metalloprotease FtsH | no data | 62 | 97 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS17285 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2919 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 62 | 92 |
| o | Dechlorosoma suillum PS | Dsui_3059 | | ATP-dependent metalloprotease FtsH | no data | 61 | 93 |
| o | Erwinia tracheiphila SCR3 | LU632_RS21105 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_0055 | | ATP-dependent metalloprotease FtsH (RefSeq) | no data | 59 | 98 |
| o | Desulfovibrio vulgaris Hildenborough JW710 | DVU1278 | ftsH | cell division protein FtsH (TIGR) | no data | 58 | 100 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_13880 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 96 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS06560 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 93 |
| o | Erwinia amylovora T8 | OLJFJH_07200 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 97 |
| o | Dickeya dadantii 3937 | DDA3937_RS03030 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 96 |
| o | Serratia liquefaciens MT49 | IAI46_01895 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 96 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS18315 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 96 |
| o | Dickeya dianthicola 67-19 | HGI48_RS03200 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 96 |
| o | Dickeya dianthicola ME23 | DZA65_RS03195 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 96 |
| o | Rahnella sp. WP5 | EX31_RS08580 | | ATP-dependent zinc metalloprotease FtsH | no data | 61 | 92 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_08080 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 93 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS12235 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 93 |
| o | Shewanella loihica PV-4 | Shew_2834 | | ATP-dependent metalloprotease FtsH (RefSeq) | no data | 60 | 92 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS16410 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 93 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16685 | | ATP-dependent zinc metalloprotease FtsH | no data | 60 | 93 |
| o | Marinobacter adhaerens HP15 | HP15_3074 | | membrane protein containing peptidase M41, FtsH / ATPase, AAA-type, core | no data | 59 | 99 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_03345 | | ATP-dependent zinc metalloprotease FtsH | no data | 57 | 98 |
| o | Pseudomonas stutzeri RCH2 | Psest_0972 | | ATP-dependent metalloprotease FtsH | no data | 61 | 96 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS15555 | | ATP-dependent zinc metalloprotease FtsH | no data | 57 | 97 |
| o | Shewanella oneidensis MR-1 | SO1197 | ftsH | cell division protein FtsH (NCBI ptt file) | no data | 60 | 92 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS06945 | | ATP-dependent metalloprotease | no data | 59 | 93 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_0635 | | ATP-dependent metalloprotease FtsH | strong | 59 | 93 |
| o | Lysobacter sp. OAE881 | ABIE51_RS06525 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 97 |
| o | Shewanella sp. ANA-3 | Shewana3_1023 | | membrane protease FtsH catalytic subunit (RefSeq) | no data | 60 | 92 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3124.1 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 63 | 88 |
| o | Pseudomonas segetis P6 | ACVTMO_RS05910 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 97 |
| o | Pseudomonas putida KT2440 | PP_4718 | | integral membrane ATP-dependent zinc metallopeptidase | no data | 59 | 94 |
| o | Shewanella amazonensis SB2B | Sama_0954 | | vesicle-fusing ATPase (RefSeq) | no data | 57 | 98 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c05970 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 99 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_442 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 57 | 95 |
| o | Alteromonas macleodii MIT1002 | MIT1002_01865 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 98 |
| o | Pseudomonas sp. BP01 | JOY50_RS26790 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 94 |
| o | Pseudomonas sp. S08-1 | OH686_17100 | | Cell division-associated, ATP-dependent zinc metalloprotease FtsH | cofit | 59 | 97 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS09510 | ftsH;go_function=ATP-dependent | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 97 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_29840 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 97 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS52525 | ftsH;go_function=ATP-dependent | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 97 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_4187 | | membrane protease FtsH catalytic subunit | no data | 58 | 95 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4187 | | membrane protease FtsH catalytic subunit | no data | 58 | 95 |
| o | Pseudomonas sp. SVBP6 | COO64_RS15215 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 95 |
| o | Pseudomonas protegens RBAN4 | FABNJH_04350 | ftsH | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 93 |
| o | Variovorax sp. OAS795 | ABID97_RS17045 | | ATP-dependent zinc metalloprotease FtsH | no data | 57 | 93 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3359 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 60 | 92 |
| o | Pseudomonas sp. RS175 | PFR28_00082 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 93 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4217 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 57 | 94 |
| o | Variovorax sp. SCN45 | GFF369 | | Cell division-associated, ATP-dependent zinc metalloprotease FtsH | no data | 57 | 93 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_07455 | | ATP-dependent metalloprotease | no data | 60 | 92 |
| o | Methylophilus sp. DMC18 | GFF317 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 93 |
| o | Pseudomonas sp. DMC3 | GFF4982 | | ATP-dependent zinc metalloprotease FtsH | no data | 59 | 93 |
| o | Pseudomonas orientalis W4I3 | QF045_RS26270 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 95 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_5094 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 58 | 95 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1167 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 58 | 95 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04953 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 96 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS25855 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 95 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25855 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 95 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_05605 | | ATP-dependent metalloprotease | no data | 59 | 92 |
| o | Pseudomonas simiae WCS417 | PS417_24015 | | ATP-dependent metalloprotease | no data | 58 | 95 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS04805 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 95 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS15280 | | ATP-dependent zinc metalloprotease FtsH | strong | 57 | 96 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS14115 | | ATP-dependent zinc metalloprotease FtsH | strong | 58 | 93 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02165 | | ATP-dependent zinc metalloprotease FtsH | strong | 57 | 96 |
| o | Ralstonia solanacearum GMI1000 | RS_RS07655 | | ATP-dependent zinc metalloprotease FtsH | no data | 57 | 96 |
| o | Ralstonia solanacearum UW163 | UW163_RS15475 | | ATP-dependent zinc metalloprotease FtsH | no data | 57 | 96 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS14165 | | ATP-dependent metalloprotease | no data | 57 | 93 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04408 | | membrane protease FtsH catalytic subunit | no data | 57 | 93 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS13485 | | cell division protein FtsH | no data | 56 | 96 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS04185 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 87 |
| o | Acinetobacter radioresistens SK82 | MPMX26_00772 | | ATP-dependent zinc metalloprotease FtsH | no data | 58 | 87 |
| o | Synechocystis sp000284455 PCC 6803 | SGL_RS04115 | | ATP-dependent zinc metalloprotease FtsH3 | no data | 52 | 92 |
| o | Synechococcus elongatus PCC 7942 | Synpcc7942_0297 | ftsH | FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 | no data | 51 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS35340 | | cell division protein FtsH | insig. | 48 | 89 |
| | Mycobacterium tuberculosis H37Rv | Rv3610c | | Membrane-bound protease FtsH (cell division protein) | strong | 58 | 73 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0942 | ftsH | FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 | no data | 47 | 92 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS13625 | | ATP-dependent zinc metalloprotease FtsH2 | no data | 47 | 92 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS06515 | | ATP-dependent zinc metalloprotease FtsH4 | sig. | 47 | 91 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS05110 | | ATP-dependent zinc metalloprotease FtsH1 | no data | 48 | 89 |
| | Pseudomonas stutzeri RCH2 | Psest_0676 | | ATP-dependent metalloprotease FtsH | insig. | 47 | 91 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1314 | ftsH | FtsH-2 peptidase. Metallo peptidase. MEROPS family M41 | sig. | 47 | 92 |
| o | Fusobacterium nucleatum SB010 | HUW76_10115 | | ATP-dependent zinc metalloprotease FtsH | strong | 46 | 92 |
| o | Bacteroides thetaiotaomicron VPI-5482 | BT4007 | | AAA-metalloprotease FtsH, with ATPase domain (NCBI ptt file) | no data | 46 | 93 |
| | Marinobacter adhaerens HP15 | HP15_1355 | | cell division protein FtsH | insig. | 45 | 92 |
| | Pseudomonas sp. RS175 | PFR28_01968 | | ATP-dependent zinc metalloprotease FtsH 4 | insig. | 46 | 92 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09215 | | cell division protein FtsH | insig. | 50 | 88 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_04826 | | ATP-dependent metallopeptidase HflB | no data | 46 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_00966 | | ATP-dependent zinc metalloprotease FtsH | insig. | 48 | 89 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS20170 | | ATP-dependent zinc metalloprotease FtsH | no data | 50 | 83 |
| | Dechlorosoma suillum PS | Dsui_1494 | | ATP-dependent metalloprotease FtsH | cofit | 48 | 92 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0998 | ftsH | FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 | no data | 48 | 89 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4178 | | Cell division protein FtsH (EC 3.4.24.-) | insig. | 47 | 90 |
| o | Bacteroides stercoris CC31F | HMPREF1181_RS09155 | | ATP-dependent zinc metalloprotease FtsH | no data | 45 | 93 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS09995 | | ATP-dependent zinc metalloprotease FtsH | cofit | 46 | 91 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_20055 | | peptidase M41 | strong | 45 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1515 | | Cell division protein FtsH (EC 3.4.24.-) | insig. | 46 | 92 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19890 | | cell division protein FtsH | insig. | 46 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_002999 | | ATP-dependent Zn protease | no data | 63 | 62 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2427 | | ATP-dependent metalloprotease FtsH | no data | 45 | 93 |
| o | Bifidobacterium breve UCC2003 | BBR_RS18180 | | ATP-dependent zinc metalloprotease FtsH | strong | 45 | 92 |
| o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14105 | | ATP-dependent zinc metalloprotease FtsH | no data | 44 | 96 |
| o | Phocaeicola dorei CL03T12C01 | ABI39_RS09755 | | ATP-dependent zinc metalloprotease FtsH | no data | 45 | 93 |
| | Cellulophaga baltica 18 | M666_RS08950 | | ATP-dependent zinc metalloprotease FtsH | no data | 52 | 77 |
| o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16240 | | ATP-dependent zinc metalloprotease FtsH | no data | 45 | 91 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21005 | | peptidase M41 | no data | 51 | 76 |
| | Pseudomonas sp. S08-1 | OH686_20210 | | Cell division-associated, ATP-dependent zinc metalloprotease FtsH | insig. | 38 | 69 |
| | Pseudomonas stutzeri RCH2 | Psest_3821 | | ATP-dependent Zn proteases | insig. | 37 | 77 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37240 | | AAA family ATPase | insig. | 37 | 75 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30010 | | cell division protein | insig. | 34 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_005052 | | cell division protease FtsH | sig. | 38 | 74 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02990 | | cell division protease FtsH | insig. | 33 | 92 |
| | Methanococcus maripaludis JJ | MMJJ_RS05910 | | proteasome-activating nucleotidase | no data | 46 | 40 |
| | Methanococcus maripaludis S2 | MMP_RS08460 | | proteasome-activating nucleotidase | strong | 46 | 40 |
| | Methanococcus maripaludis JJ | MMJJ_RS04505 | | CDC48 family AAA ATPase | strong | 45 | 35 |
| | Methanococcus maripaludis S2 | MMP_RS00985 | | CDC48 family AAA ATPase | strong | 45 | 35 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2176 | | AAA family ATPase, CDC48 subfamily | insig. | 49 | 36 |
| | Sphingobium sp. HT1-2 | GFF956 | | AAA family ATPase Cdc48 | insig. | 45 | 40 |
| | Sphingobium sp. HT1-2 | GFF956 | | AAA family ATPase Cdc48 | insig. | 50 | 35 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2176 | | AAA family ATPase, CDC48 subfamily | insig. | 45 | 37 |
| | Mycobacterium tuberculosis H37Rv | Rv0435c | | Putative conserved ATPase | insig. | 41 | 38 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13070 | | ATP-binding protein | insig. | 43 | 35 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13070 | | ATP-binding protein | sig. | 43 | 35 |
| | Methanococcus maripaludis JJ | MMJJ_RS04505 | | CDC48 family AAA ATPase | strong | 37 | 45 |
| | Methanococcus maripaludis S2 | MMP_RS00985 | | CDC48 family AAA ATPase | strong | 44 | 34 |
| | Rhodopseudomonas palustris CGA009 | TX73_021155 | | AAA family ATPase | insig. | 46 | 35 |
| | Cellulophaga baltica 18 | M666_RS05815 | | ATP-binding protein | insig. | 42 | 33 |
| | Rhodopseudomonas palustris CGA009 | TX73_021155 | | AAA family ATPase | insig. | 44 | 33 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS08555 | | ATP-dependent Zn protease | insig. | 32 | 70 |
| | Cellulophaga baltica 18 | M666_RS02015 | | AAA family ATPase | insig. | 35 | 35 |
| | Methanococcus maripaludis JJ | MMJJ_RS05340 | | AAA family ATPase | insig. | 35 | 38 |
| | Methanococcus maripaludis S2 | MMP_RS00150 | | AAA family ATPase | sig. | 35 | 38 |
| | Bifidobacterium breve UCC2003 | BBR_RS17210 | | 26S protease regulatory subunit | insig. | 35 | 39 |
| | Rhizobium sp. OAE497 | ABIE40_RS28070 | | AAA family ATPase | insig. | 31 | 50 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS05290 | | ATP-dependent Zn protease | insig. | 30 | 68 |
| | Rhizobium sp. OAE497 | ABIE40_RS12380 | | AAA family ATPase | insig. | 29 | 63 |
| | Mycobacterium tuberculosis H37Rv | Rv2115c | | Mycobacterial proteasome ATPase Mpa | no data | 36 | 28 |
| | Pseudomonas segetis P6 | ACVTMO_RS04450 | | AAA family ATPase | insig. | 29 | 40 |
| | Bifidobacterium breve UCC2003 | BBR_RS17605 | | proteasome ATPase | insig. | 31 | 33 |
| | Paraburkholderia graminis OAS925 | ABIE53_002998 | | ATP-dependent Zn protease | no data | 39 | 23 |
| | Pseudomonas sp. S08-1 | OH686_15170 | | ATPase, AAA family | insig. | 30 | 40 |
| | Pseudomonas stutzeri RCH2 | Psest_3642 | | ATPases of the AAA+ class | insig. | 29 | 40 |
| | Pseudomonas sp. DMC3 | GFF4126 | | ATP-dependent zinc metalloprotease FtsH | cofit | 32 | 37 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04859 | | transitional endoplasmic reticulum ATPase | insig. | 35 | 33 |
| | Pseudomonas stutzeri RCH2 | Psest_0442 | | ATPases of the AAA+ class | strong | 32 | 35 |
| | Shewanella loihica PV-4 | Shew_3822 | | ATPase central domain-containing protein (RefSeq) | strong | 33 | 29 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36135 | | AAA family ATPase | insig. | 28 | 40 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23230 | | AAA family ATPase | insig. | 28 | 40 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22140 | | ATPase | insig. | 28 | 40 |
| | Paraburkholderia graminis OAS925 | ABIE53_000155 | | SpoVK/Ycf46/Vps4 family AAA+-type ATPase | no data | 33 | 35 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1620 | ycf46 | ATPase | cofit | 34 | 35 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS14065 | | AAA family ATPase | cofit | 33 | 35 |
| | Shewanella amazonensis SB2B | Sama_2804 | | AAA family ATPase (RefSeq) | insig. | 30 | 35 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS16055 | | AAA family ATPase | sig. | 31 | 31 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS19185 | | ATPase | no data | 36 | 32 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS17385 | | ATPase AAA | no data | 31 | 33 |
| | Marinobacter adhaerens HP15 | HP15_1744 | | AAA ATPase central domain protein | insig. | 35 | 29 |
| | Lysobacter sp. OAE881 | ABIE51_RS01545 | | AAA family ATPase | insig. | 33 | 33 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS25555 | | AAA family ATPase | insig. | 31 | 29 |
| | Shewanella loihica PV-4 | Shew_0892 | | ATPase central domain-containing protein (RefSeq) | insig. | 29 | 36 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0172 | | ATPases of the AAA+ class | insig. | 32 | 35 |
| | Pectobacterium carotovorum WPP14 | HER17_RS18900 | | ATP-binding protein | no data | 29 | 38 |
| | Shewanella oneidensis MR-1 | SO3611 | | ATPase, AAA family (NCBI ptt file) | insig. | 29 | 36 |
| | Shewanella loihica PV-4 | Shew_3863 | | ATPase central domain-containing protein (RefSeq) | strong | 30 | 34 |
| | Pseudomonas segetis P6 | ACVTMO_RS00285 | | AAA family ATPase | no data | 31 | 35 |
| | Shewanella sp. ANA-3 | Shewana3_3196 | | ATPase central domain-containing protein (RefSeq) | insig. | 29 | 36 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4142 | | Cell division protein FtsH (EC 3.4.24.-) | no data | 33 | 33 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04859 | | transitional endoplasmic reticulum ATPase | insig. | 31 | 30 |
| | Pseudomonas orientalis W4I3 | QF045_RS03885 | | ATP-binding protein | no data | 35 | 22 |
| | Agrobacterium fabrum C58 | Atu6082 | | AAA-family ATPase | no data | 35 | 26 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0417 | | ATPase | strong | 32 | 35 |
| | Sphingobium sp. HT1-2 | GFF4390 | | AAA-family ATPase, Atu6082 type | no data | 38 | 25 |
| | Rhizobium sp. OAE497 | ABIE40_RS08705 | | ATP-binding protein | insig. | 33 | 32 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS25555 | | AAA family ATPase | insig. | 29 | 32 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15350 | | AAA family ATPase | insig. | 28 | 36 |
| | Xanthobacter sp. DMC5 | GFF300 | | ATP-dependent zinc metalloprotease FtsH | insig. | 34 | 31 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS12925 | | AAA family ATPase | strong | 28 | 35 |
| | Dechlorosoma suillum PS | Dsui_2646 | | AAA+ family ATPase | no data | 34 | 24 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS60055 | | ATP-binding protein | no data | 27 | 38 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00250 | | AAA family ATPase | insig. | 29 | 37 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS08020 | | AAA family ATPase | insig. | 29 | 36 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08265 | | AAA family ATPase | insig. | 29 | 37 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3580 | | ATPases of the AAA+ class | insig. | 26 | 35 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS02020 | | ATP-binding protein | insig. | 35 | 21 |
| | Mycobacterium tuberculosis H37Rv | Rv0435c | | Putative conserved ATPase | insig. | 28 | 36 |
| | Paraburkholderia graminis OAS925 | ABIE53_000512 | | SpoVK/Ycf46/Vps4 family AAA+-type ATPase | sig. | 32 | 27 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03370 | | ATP-binding protein | insig. | 27 | 31 |
| | Alteromonas macleodii MIT1002 | MIT1002_03220 | | ATP-dependent zinc metalloprotease FtsH | insig. | 33 | 21 |
| | Dickeya dianthicola ME23 | DZA65_RS10440 | | ATP-binding protein | insig. | 28 | 35 |
| | Azospirillum brasilense Sp245 | AZOBR_RS33220 | | hypothetical protein | insig. | 56 | 7 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_02215 | | AAA family ATPase | insig. | 35 | 16 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02485 | | ATP-binding protein | insig. | 31 | 23 |
| | Ralstonia solanacearum UW163 | UW163_RS11240 | | ATP-binding protein | insig. | 31 | 23 |
| | Escherichia coli ECOR27 | NOLOHH_00265 | | ATPase | insig. | 26 | 40 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS14395 | | ATP-binding protein | insig. | 30 | 23 |
| | Ralstonia solanacearum GMI1000 | RS_RS09860 | | ATP-binding protein | insig. | 30 | 23 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS14835 | | ATP-binding protein | insig. | 31 | 19 |
| | Pseudomonas sp. BP01 | JOY50_RS14745 | lon | endopeptidase La | insig. | 31 | 28 |
| | Bosea sp. OAE506 | ABIE41_RS18050 | | endopeptidase La | no data | 31 | 36 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4603 | | ATPase related to the helicase subunit of the Holliday junction resolvase | strong | 29 | 17 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS16975 | | replication-associated recombination protein A | insig. | 36 | 15 |
| | Pseudomonas putida KT2440 | PP_1443 | | DNA-binding, ATP-dependent protease | insig. | 30 | 28 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_00540 | | AAA family ATPase | insig. | 27 | 35 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3944 | | ATP dependent PIM1 peptidase, Serine peptidase, MEROPS family S16 | insig. | 29 | 28 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3944 | | ATP dependent PIM1 peptidase, Serine peptidase, MEROPS family S16 | insig. | 29 | 28 |
| | Pseudomonas sp. SVBP6 | COO64_RS16640 | lon | endopeptidase La | insig. | 31 | 28 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS05830 | | ATP-binding protein | insig. | 28 | 30 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS06085 | | ATP-binding protein | insig. | 28 | 30 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS20200 | | replication-associated recombination protein A | insig. | 36 | 15 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS06440 | | replication-associated recombination protein A | sig. | 36 | 15 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0111 | clpX | ATP-dependent protease ATP-binding subunit ClpX (RefSeq) | sig. | 32 | 23 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS07060 | | AAA family ATPase | insig. | 26 | 32 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS13915 | | ATPase | sig. | 26 | 32 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1205 | | putative ATPase, AAA family (NCBI ptt file) | sig. | 35 | 15 |
| | Variovorax sp. SCN45 | GFF6421 | | ATPase, AAA family | cofit | 30 | 24 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2559 | | AAA ATPase central domain protein (RefSeq) | sig. | 27 | 27 |
| | Pseudomonas sp. RS175 | PFR28_00322 | | Lon protease | insig. | 29 | 28 |