Homologs of Shewana3_2900 from Shewanella sp. ANA-3

farnesyl-diphosphate synthase (RefSeq)
SEED: Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)
KEGG: farnesyl diphosphate synthase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_2900 farnesyl-diphosphate synthase (RefSeq) no data 100 100
o Shewanella oneidensis MR-1 SO1526 ispA geranyltranstransferase (NCBI ptt file) no data 98 100
o Shewanella loihica PV-4 Shew_2770 polyprenyl synthetase (RefSeq) sig. 73 100
o Shewanella amazonensis SB2B Sama_2435 geranyltranstransferase (RefSeq) strong 68 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_04565 (2E,6E)-farnesyl diphosphate synthase no data 57 99
o Pantoea sp. MT58 IAI47_14735 (2E,6E)-farnesyl diphosphate synthase no data 56 97
o Erwinia tracheiphila SCR3 LU632_RS18835 ispA (2E,6E)-farnesyl diphosphate synthase no data 54 97
o Rahnella sp. WP5 EX31_RS22160 (2E,6E)-farnesyl diphosphate synthase no data 56 98
o Serratia liquefaciens MT49 IAI46_04930 (2E,6E)-farnesyl diphosphate synthase no data 58 96
o Dickeya dianthicola ME23 DZA65_RS05920 (2E,6E)-farnesyl diphosphate synthase no data 55 97
o Dickeya dianthicola 67-19 HGI48_RS05595 (2E,6E)-farnesyl diphosphate synthase no data 55 97
o Lysobacter sp. OAE881 ABIE51_RS06815 (2E,6E)-farnesyl diphosphate synthase strong 49 98
o Dickeya dadantii 3937 DDA3937_RS05535 (2E,6E)-farnesyl diphosphate synthase no data 54 97
o Kangiella aquimarina DSM 16071 B158DRAFT_1919 farnesyl-diphosphate synthase (EC 2.5.1.10) no data 54 98
o Pectobacterium carotovorum WPP14 HER17_RS15930 (2E,6E)-farnesyl diphosphate synthase no data 53 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4325 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) no data 57 88
o Alteromonas macleodii MIT1002 MIT1002_02692 Farnesyl diphosphate synthase no data 52 97
o Escherichia coli Nissle 1917 ECOLIN_RS02540 (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli ECRC62 BNILDI_22780 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03255 Farnesyl diphosphate synthase no data 56 88
o Escherichia coli BL21 ECD_00369 geranyltranstransferase no data 56 88
o Escherichia coli ECOR27 NOLOHH_01365 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli ECOR38 HEPCGN_07045 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli BW25113 b0421 ispA geranyltranstransferase (NCBI) no data 56 88
o Escherichia coli ECRC101 OKFHMN_08415 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli ECRC101 MCAODC_27640 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli ECRC102 NIAGMN_06470 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli ECRC98 JDDGAC_12070 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia coli ECRC99 KEDOAH_19550 ispA (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Escherichia fergusonii Becca EFB2_03636 Farnesyl diphosphate synthase no data 56 88
o Marinobacter adhaerens HP15 HP15_581 geranyltranstransferase no data 50 96
o Enterobacter asburiae PDN3 EX28DRAFT_2550 Geranylgeranyl pyrophosphate synthase no data 52 99
o Enterobacter sp. TBS_079 MPMX20_01012 Farnesyl diphosphate synthase no data 51 99
o Klebsiella michiganensis M5al BWI76_RS06385 (2E,6E)-farnesyl diphosphate synthase no data 56 88
o Rhodanobacter denitrificans MT42 LRK55_RS03115 polyprenyl synthetase family protein insig. 46 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03365 polyprenyl synthetase family protein sig. 46 99
o Rhodospirillum rubrum S1H Rru_A2618 Polyprenyl synthetase (NCBI) no data 46 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06016 farnesyl-diphosphate synthase no data 47 96
o Pseudomonas sp. S08-1 OH686_15785 (2E,6E)-farnesyl diphosphate synthase no data 48 100
o Paraburkholderia graminis OAS925 ABIE53_004858 farnesyl diphosphate synthase strong 48 91
o Pseudomonas putida KT2440 PP_0528 farnesyl diphosphate synthase no data 51 97
o Rhodanobacter sp. FW510-T8 OKGIIK_10250 ispA geranyl transferase no data 46 96
o Burkholderia phytofirmans PsJN BPHYT_RS33580 geranyltranstransferase strong 47 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1890.1 hypothetical protein sig. 52 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1008 Geranylgeranyl pyrophosphate synthase strong 43 99
o Dechlorosoma suillum PS Dsui_3509 geranylgeranyl pyrophosphate synthase no data 46 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2662 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 51 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1326 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) no data 50 97
o Herbaspirillum seropedicae SmR1 HSERO_RS19130 geranyl transferase no data 45 95
o Pseudomonas fluorescens FW300-N2E3 AO353_06650 geranyl transferase no data 50 97
o Pseudomonas syringae pv. syringae B728a Psyr_0605 farnesyl-diphosphate synthase no data 48 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0605 farnesyl-diphosphate synthase no data 48 100
o Azospirillum brasilense Sp245 AZOBR_RS20795 farnesyl-diphosphate synthase no data 46 88
o Pseudomonas stutzeri RCH2 Psest_0642 Geranylgeranyl pyrophosphate synthase no data 48 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21690 farnesyl diphosphate synthase no data 48 95
o Fusobacterium nucleatum SB010 HUW76_03605 polyprenyl synthetase family protein cofit 43 86
o Pseudomonas sp. RS175 PFR28_03936 Farnesyl diphosphate synthase no data 48 97
o Pseudomonas fluorescens SBW25 PFLU_RS26840 hypothetical protein no data 49 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26840 hypothetical protein no data 49 97
o Azospirillum sp. SherDot2 MPMX19_05065 Farnesyl diphosphate synthase insig. 44 88
o Pseudomonas simiae WCS417 PS417_25200 geranyl transferase no data 49 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4933 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 49 97
o Pseudomonas fluorescens FW300-N2C3 AO356_14995 geranyl transferase no data 49 97
o Rhodopseudomonas palustris CGA009 TX73_002715 polyprenyl synthetase family protein no data 43 90
o Castellaniella sp019104865 MT123 ABCV34_RS02230 polyprenyl synthetase family protein no data 44 96
o Variovorax sp. SCN45 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) cofit 48 79
  Erwinia tracheiphila SCR3 LU632_RS23555 polyprenyl synthetase family protein insig. 42 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS15235 polyprenyl synthetase family protein no data 45 96
o Caulobacter crescentus NA1000 CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 48 90
o Caulobacter crescentus NA1000 Δfur CCNA_02150 dimethylallyltransferase/geranyltranstransferase no data 48 90
o Acinetobacter radioresistens SK82 MPMX26_00661 Farnesyl diphosphate synthase no data 40 98
o Variovorax sp. OAS795 ABID97_RS09275 polyprenyl synthetase family protein strong 48 79
o Synechococcus elongatus PCC 7942 Synpcc7942_0776 crtE farnesyl-diphosphate synthase no data 42 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03710 (2E,6E)-farnesyl diphosphate synthase no data 49 82
o Ralstonia solanacearum UW163 UW163_RS09960 (2E,6E)-farnesyl diphosphate synthase no data 49 82
o Ralstonia solanacearum PSI07 RPSI07_RS13520 polyprenyl synthetase family protein no data 49 82
o Acidovorax sp. GW101-3H11 Ac3H11_3565 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 45 88
o Cupriavidus basilensis FW507-4G11 RR42_RS15010 geranyl transferase no data 47 89
o Phaeobacter inhibens DSM 17395 PGA1_c34160 geranyltranstransferase IspA no data 44 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS15640 polyprenyl synthetase family protein no data 48 82
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09695 polyprenyl synthetase family protein cofit 43 91
o Ralstonia solanacearum GMI1000 RS_RS11155 polyprenyl synthetase family protein no data 49 78
o Desulfovibrio vulgaris Hildenborough JW710 DVU1349 SelGGPS geranylgeranyl diphosphate synthase (TIGR) insig. 45 90
o Sinorhizobium meliloti 1021 SMc03884 geranyltranstransferase no data 48 90
o Bosea sp. OAE506 ABIE41_RS08680 polyprenyl synthetase family protein no data 45 92
o Magnetospirillum magneticum AMB-1 AMB_RS14610 polyprenyl synthetase family protein no data 44 96
o Dinoroseobacter shibae DFL-12 Dshi_3295 Polyprenyl synthetase (RefSeq) insig. 48 85
o Agrobacterium fabrum C58 Atu2721 geranyltranstransferase no data 47 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5576 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) no data 44 85
o Rhizobium sp. OAE497 ABIE40_RS18720 polyprenyl synthetase family protein insig. 43 90
o Desulfovibrio vulgaris Miyazaki F DvMF_0125 Polyprenyl synthetase (RefSeq) sig. 41 89
o Methanococcus maripaludis S2 MMP_RS00275 polyprenyl synthetase family protein no data 35 89
o Methanococcus maripaludis JJ MMJJ_RS05210 polyprenyl synthetase family protein no data 35 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11115 polyprenyl synthetase family protein no data 34 83
  Dinoroseobacter shibae DFL-12 Dshi_3514 Polyprenyl synthetase (RefSeq) strong 37 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14225 polyprenyl synthetase family protein strong 32 89
  Phocaeicola dorei CL03T12C01 ABI39_RS09855 polyprenyl synthetase family protein strong 33 80
  Bosea sp. OAE506 ABIE41_RS09875 polyprenyl synthetase family protein insig. 38 87
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17360 geranyl transferase no data 33 86
  Bacteroides ovatus ATCC 8483 BACOVA_00644 polyprenyl synthetase no data 33 80