Homologs of PP_4809 from Pseudomonas putida KT2440

Ribosomal silencing factor RsfS
KEGG: ribosome-associated protein

123 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4809 Ribosomal silencing factor RsfS no data 100 100
o Pseudomonas sp. SVBP6 COO64_RS15620 rsfS ribosome silencing factor sig. 87 100
o Pseudomonas sp. BP01 JOY50_RS17690 rsfS ribosome silencing factor insig. 86 100
o Pseudomonas protegens RBAN4 FABNJH_27540 rsfS ribosome silencing factor insig. 81 97
o Pseudomonas simiae WCS417 PS417_24735 ribosome-associated protein IOJAP no data 78 99
o Pseudomonas fluorescens SBW25 PFLU_RS26665 ribosome silencing factor no data 79 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26665 ribosome silencing factor no data 79 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05100 Ribosomal silencing factor RsfS no data 79 96
o Pseudomonas orientalis W4I3 QF045_RS27020 ribosome silencing factor cofit 79 96
o Pseudomonas sp. DMC3 GFF3878 Ribosomal silencing factor RsfS no data 77 96
o Pseudomonas fluorescens FW300-N2E3 AO353_06485 ribosome silencing factor no data 78 96
  Pseudomonas fluorescens FW300-N2C3 AO356_15300 ribosome silencing factor no data 79 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4995 Iojap protein no data 79 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1358 Iojap protein no data 78 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2690 Iojap protein no data 76 96
o Pseudomonas sp. RS175 PFR28_03870 Ribosomal silencing factor RsfS no data 75 96
o Pseudomonas syringae pv. syringae B728a Psyr_4367 Iojap-related protein insig. 70 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4367 Iojap-related protein insig. 70 90
o Pseudomonas segetis P6 ACVTMO_RS05205 rsfS ribosome silencing factor insig. 56 88
o Pseudomonas sp. S08-1 OH686_09330 ribosome silencing factor insig. 60 84
  Pseudomonas stutzeri RCH2 Psest_0510 iojap-like ribosome-associated protein sig. 61 78
o Pseudomonas aeruginosa PUPa3 DQ20_RS48160 rsfS;go_function=ribosome ribosome silencing factor sig. 58 85
o Pseudomonas aeruginosa MRSN321 DY961_RS12830 rsfS;go_function=ribosome ribosome silencing factor sig. 58 85
o Pseudomonas aeruginosa PA14 IKLFDK_20655 ribosome silencing factor sig. 58 85
  Marinobacter adhaerens HP15 HP15_603 Iojap-related protein sig. 53 76
  Methylophilus sp. DMC18 GFF826 Ribosomal silencing factor RsfS cofit 50 73
  Pantoea sp. MT58 IAI47_14015 ribosome silencing factor sig. 54 65
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS14125 rsfS ribosome silencing factor cofit 53 65
  Xanthobacter sp. DMC5 GFF3948 Ribosomal silencing factor RsfS insig. 47 76
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07245 ribosome silencing factor insig. 48 73
o Acinetobacter radioresistens SK82 MPMX26_00531 Ribosomal silencing factor RsfS strong 43 84
  Rhodanobacter denitrificans MT42 LRK55_RS02455 ribosome silencing factor insig. 46 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02700 ribosome silencing factor sig. 46 77
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09060 ribosome silencing factor no data 52 66
  Kangiella aquimarina DSM 16071 B158DRAFT_0086 iojap-like ribosome-associated protein strong 52 65
  Rhodanobacter sp. FW510-T8 OKGIIK_09755 rsfS ribosome silencing factor cofit 51 66
  Dickeya dadantii 3937 DDA3937_RS06180 ribosome silencing factor insig. 51 65
  Dickeya dianthicola 67-19 HGI48_RS06225 ribosome silencing factor insig. 51 65
  Dickeya dianthicola ME23 DZA65_RS06570 ribosome silencing factor insig. 51 65
  Pectobacterium carotovorum WPP14 HER17_RS15235 ribosome silencing factor insig. 49 65
  Enterobacter asburiae PDN3 EX28DRAFT_2326 ribosome silencing factor RsfS/YbeB/iojap insig. 51 65
  Enterobacter sp. TBS_079 MPMX20_01296 Ribosomal silencing factor RsfS insig. 51 65
  Acinetobacter baumannii LAC-4 RR41_RS16120 ribosome silencing factor no data 46 72
  Vibrio cholerae E7946 ATCC 55056 CSW01_04870 ribosome silencing factor insig. 49 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4550 Iojap protein insig. 48 65
  Escherichia coli ECOR27 NOLOHH_23730 rsfS ribosome silencing factor strong 48 65
  Escherichia coli ECOR38 HEPCGN_00920 rsfS ribosome silencing factor sig. 48 65
  Escherichia coli ECRC100 OKFHMN_07355 rsfS ribosome silencing factor cofit 48 65
  Escherichia coli ECRC101 MCAODC_26570 rsfS ribosome silencing factor sig. 48 65
  Escherichia coli ECRC102 NIAGMN_05410 rsfS ribosome silencing factor insig. 48 65
  Escherichia coli ECRC62 BNILDI_21740 rsfS ribosome silencing factor cofit 48 65
  Escherichia coli ECRC98 JDDGAC_11000 rsfS ribosome silencing factor insig. 48 65
  Escherichia coli ECRC99 KEDOAH_20615 rsfS ribosome silencing factor no data 48 65
  Erwinia amylovora T8 OLJFJH_17215 ribosome silencing factor insig. 48 65
  Escherichia coli BL21 ECD_00606 ribosomal silencing factor cofit 48 65
  Escherichia fergusonii Becca EFB2_03455 Ribosomal silencing factor RsfS insig. 48 65
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03069 Ribosomal silencing factor RsfS insig. 48 65
  Escherichia coli Nissle 1917 ECOLIN_RS03470 ribosome silencing factor no data 48 65
  Escherichia coli BW25113 b0637 ybeB orf, hypothetical protein (VIMSS) no data 48 65
  Bosea sp. OAE506 ABIE41_RS07570 ribosome silencing factor insig. 48 75
  Herbaspirillum seropedicae SmR1 HSERO_RS17775 hypothetical protein no data 52 66
  Dechlorosoma suillum PS Dsui_0452 iojap-like ribosome-associated protein insig. 45 73
  Burkholderia phytofirmans PsJN BPHYT_RS06390 ribosome-associated protein IOJAP sig. 50 66
  Klebsiella pneumoniae MKP103 KDGMDA_16405 ribosome silencing factor strong 48 65
  Klebsiella pneumoniae MRSN742743 KFA93_RS02220 rsfS;go_function=ribosome ribosome silencing factor sig. 48 65
  Paraburkholderia graminis OAS925 ABIE53_001542 ribosome-associated protein sig. 50 66
  Rahnella sp. WP5 EX31_RS23130 ribosome silencing factor insig. 49 65
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04518 ribosome-associated protein insig. 50 66
  Klebsiella michiganensis M5al BWI76_RS08045 ribosome silencing factor RsfS no data 47 65
  Shewanella sp. ANA-3 Shewana3_0997 iojap-like protein (RefSeq) no data 46 65
  Shewanella oneidensis MR-1 SO1170 iojap domain protein (NCBI ptt file) sig. 46 65
o Phaeobacter inhibens DSM 17395 PGA1_c29760 iojap-like ribosome-associated protein sig. 41 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03560 ribosome silencing factor strong 49 66
  Ralstonia solanacearum UW163 UW163_RS10110 ribosome silencing factor insig. 49 66
  Paraburkholderia sabiae LMG 24235 QEN71_RS24415 ribosome silencing factor insig. 48 66
  Ralstonia solanacearum GMI1000 RS_RS11010 ribosome silencing factor insig. 49 66
  Ralstonia solanacearum PSI07 RPSI07_RS13665 ribosome silencing factor insig. 49 66
  Ralstonia sp. UNC404CL21Col ABZR87_RS15425 ribosome silencing factor sig. 44 82
  Shewanella amazonensis SB2B Sama_2586 iojap domain-containing protein (RefSeq) sig. 43 74
  Serratia liquefaciens MT49 IAI46_05940 ribosome silencing factor no data 45 65
  Lysobacter sp. OAE881 ABIE51_RS06745 ribosome silencing factor insig. 48 78
  Dinoroseobacter shibae DFL-12 Dshi_0087 iojap-like protein (RefSeq) insig. 41 73
  Magnetospirillum magneticum AMB-1 AMB_RS23800 ribosome silencing factor insig. 47 73
  Castellaniella sp019104865 MT123 ABCV34_RS02535 ribosome silencing factor insig. 47 66
  Shewanella loihica PV-4 Shew_2933 iojap-like protein (RefSeq) no data 46 65
  Acidovorax sp. GW101-3H11 Ac3H11_2419 Iojap protein strong 46 65
  Rhodopseudomonas palustris CGA009 TX73_000865 ribosome silencing factor insig. 41 71
  Cupriavidus basilensis FW507-4G11 RR42_RS04715 ribosome silencing factor RsfS insig. 47 65
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1874.1 Iojap protein insig. 47 78
  Alteromonas macleodii MIT1002 MIT1002_01853 Ribosomal silencing factor RsfS insig. 43 73
  Variovorax sp. OAS795 ABID97_RS16720 ribosome silencing factor insig. 45 65
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_02455 rsfS ribosome silencing factor cofit 44 65
  Erwinia tracheiphila SCR3 LU632_RS16365 rsfS ribosome silencing factor insig. 44 65
  Variovorax sp. SCN45 GFF299 Ribosomal silencing factor RsfA cofit 45 65
  Azospirillum brasilense Sp245 AZOBR_RS04065 ribosome-associated protein IOJAP insig. 41 78
  Rhodospirillum rubrum S1H Rru_A1236 Iojap-related protein (NCBI) insig. 43 69
  Rhizobium sp. OAE497 ABIE40_RS18960 ribosome silencing factor insig. 41 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2428 iojap-like ribosome-associated protein sig. 41 76
o Cellulophaga baltica 18 M666_RS08955 ribosome silencing factor insig. 35 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2504 ribosome silencing factor RsfS/YbeB/iojap strong 41 73
  Caulobacter crescentus NA1000 CCNA_03545 iojap protein family no data 42 65
  Caulobacter crescentus NA1000 Δfur CCNA_03545 iojap protein family no data 42 65
  Bifidobacterium breve UCC2003 BBR_RS14420 ribosome silencing factor insig. 40 73
  Agrobacterium fabrum C58 Atu2777 hypothetical protein strong 38 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4528 Iojap protein cofit 40 74
  Azospirillum sp. SherDot2 MPMX19_01941 Ribosomal silencing factor RsfS insig. 43 60
  Sphingobium sp. HT1-2 GFF750 Ribosomal silencing factor RsfA cofit 40 70
  Sinorhizobium meliloti 1021 SMc03780 hypothetical protein sig. 40 69
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14820 ribosome silencing factor cofit 40 65
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21000 ribosome silencing factor strong 39 83
  Synechocystis sp000284455 PCC 6803 SGL_RS07700 ribosome silencing factor strong 38 80
  Synechococcus elongatus PCC 7942 Synpcc7942_0164 Iojap-related protein strong 41 68
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20060 ribosome silencing factor RsfS strong 36 80
  Mycobacterium tuberculosis H37Rv Rv2420c Conserved hypothetical protein no data 40 60
  Bacteroides stercoris CC31F HMPREF1181_RS09150 ribosome silencing factor strong 30 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14110 ribosome silencing factor insig. 31 81
  Bacteroides thetaiotaomicron VPI-5482 BT4008 conserved hypothetical protein (NCBI ptt file) strong 31 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20165 ribosome silencing factor strong 37 69
  Phocaeicola dorei CL03T12C01 ABI39_RS09760 ribosome silencing factor insig. 31 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16245 ribosome silencing factor sig. 30 80
  Bacteroides ovatus ATCC 8483 BACOVA_04827 iojap-like protein strong 30 78
  Desulfovibrio vulgaris Miyazaki F DvMF_0440 iojap-like protein (RefSeq) strong 31 77
  Desulfovibrio vulgaris Hildenborough JW710 DVU1618 iojap-related protein (TIGR) no data 31 68