Homologs of PP_4733 from Pseudomonas putida KT2440

SsrA-binding protein
SEED: tmRNA-binding protein SmpB
KEGG: SsrA-binding protein

123 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pseudomonas putida KT2440	PP_4733		SsrA-binding protein	no data	100	100
o	Pseudomonas sp. BP01	JOY50_RS26715	smpB	SsrA-binding protein SmpB	insig.	95	100
o	Pseudomonas sp. SVBP6	COO64_RS15300	smpB	SsrA-binding protein SmpB	sig.	91	100
o	Pseudomonas fluorescens FW300-N2E3	AO353_05690		SsrA-binding protein	strong	88	100
o	Pseudomonas fluorescens FW300-N2C3	AO356_07540		SsrA-binding protein	sig.	86	100
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_3378		tmRNA-binding protein SmpB	no data	86	100
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_04969		SsrA-binding protein	no data	86	100
o	Pseudomonas orientalis W4I3	QF045_RS26350		SsrA-binding protein SmpB	insig.	86	100
o	Pseudomonas sp. RS175	PFR28_00065		SsrA-binding protein	no data	86	100
o	Pseudomonas simiae WCS417	PS417_24095		SsrA-binding protein	no data	86	100
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_1184		tmRNA-binding protein SmpB	no data	86	100
o	Pseudomonas fluorescens SBW25	PFLU_RS25935		SsrA-binding protein SmpB	strong	86	100
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS25935		SsrA-binding protein SmpB	no data	86	100
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_5112		tmRNA-binding protein SmpB	insig.	85	100
o	Pseudomonas sp. DMC3	GFF4965		SsrA-binding protein	cofit	84	100
o	Pseudomonas syringae pv. syringae B728a	Psyr_4203		SsrA-binding protein	sig.	83	100
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_4203		SsrA-binding protein	strong	83	100
o	Pseudomonas sp. S08-1	OH686_17025		SsrA-binding protein	cofit	80	100
o	Pseudomonas stutzeri RCH2	Psest_0957		SsrA-binding protein	no data	79	100
o	Pseudomonas aeruginosa MRSN321	DY961_RS09600	smpB;go_function=RNA	SsrA-binding protein SmpB	sig.	78	100
o	Pseudomonas aeruginosa PA14	IKLFDK_29750		SsrA-binding protein SmpB	strong	78	100
o	Pseudomonas aeruginosa PUPa3	DQ20_RS52440	smpB;go_function=RNA	SsrA-binding protein SmpB	sig.	78	100
o	Pseudomonas segetis P6	ACVTMO_RS05825	smpB	SsrA-binding protein SmpB	no data	76	99
o	Marinobacter adhaerens HP15	HP15_3090		SsrA-binding protein	no data	68	96
o	Kangiella aquimarina DSM 16071	B158DRAFT_0969		SsrA-binding protein	strong	65	96
o	Acinetobacter baumannii LAC-4	RR41_RS15055		SsrA-binding protein SmpB	no data	65	92
o	Acinetobacter radioresistens SK82	MPMX26_00737		SsrA-binding protein	strong	65	92
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4158		tmRNA-binding protein SmpB	strong	58	99
o	Escherichia coli BL21	ECD_02508		tmRNA-binding trans-translation protein	strong	59	97
o	Escherichia fergusonii Becca	EFB2_01273		SsrA-binding protein	sig.	59	97
o	Escherichia coli ECOR27	NOLOHH_12795	smpB	SsrA-binding protein SmpB	no data	59	97
o	Escherichia coli ECOR38	HEPCGN_20245	smpB	SsrA-binding protein SmpB	no data	59	97
o	Escherichia coli ECRC100	OKFHMN_21125	smpB	SsrA-binding protein SmpB	no data	59	97
o	Escherichia coli ECRC101	MCAODC_11650	smpB	SsrA-binding protein SmpB	no data	59	97
o	Escherichia coli ECRC102	NIAGMN_18895	smpB	SsrA-binding protein SmpB	no data	59	97
o	Escherichia coli ECRC62	BNILDI_11600	smpB	SsrA-binding protein SmpB	insig.	59	97
o	Escherichia coli ECRC98	JDDGAC_24790	smpB	SsrA-binding protein SmpB	strong	59	97
o	Escherichia coli ECRC99	KEDOAH_07095	smpB	SsrA-binding protein SmpB	no data	59	97
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_01087		SsrA-binding protein	sig.	59	97
o	Escherichia coli Nissle 1917	ECOLIN_RS14795		SsrA-binding protein SmpB	no data	59	97
o	Escherichia coli BW25113	b2620	smpB	SsrA-binding protein (NCBI)	strong	59	97
o	Enterobacter asburiae PDN3	EX28DRAFT_2723		SsrA-binding protein	insig.	58	99
o	Enterobacter sp. TBS_079	MPMX20_03490		SsrA-binding protein	strong	58	99
o	Rahnella sp. WP5	EX31_RS21740		SsrA-binding protein SmpB	no data	62	90
o	Pectobacterium carotovorum WPP14	HER17_RS17440		SsrA-binding protein SmpB	cofit	58	97
o	Dickeya dianthicola ME23	DZA65_RS04215		SsrA-binding protein SmpB	insig.	58	99
o	Dickeya dadantii 3937	DDA3937_RS04305		SsrA-binding protein SmpB	no data	57	99
o	Dickeya dianthicola 67-19	HGI48_RS04300		SsrA-binding protein SmpB	insig.	59	96
o	Alteromonas macleodii MIT1002	MIT1002_01806		Small protein B	no data	56	95
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS14680		SsrA-binding protein SmpB	no data	55	97
o	Pantoea sp. MT58	IAI47_04790		SsrA-binding protein SmpB	no data	55	97
o	Klebsiella michiganensis M5al	BWI76_RS21580		SsrA-binding protein	insig.	55	99
o	Erwinia tracheiphila HP pepo 2.2	IJEDHG_26965	smpB	SsrA-binding protein SmpB	no data	60	90
o	Erwinia tracheiphila SCR3	LU632_RS17025	smpB	SsrA-binding protein SmpB	no data	60	90
o	Klebsiella pneumoniae MKP103	KDGMDA_02270		SsrA-binding protein SmpB	no data	55	99
o	Klebsiella pneumoniae MRSN742743	KFA93_RS24705	smpB;go_function=RNA	SsrA-binding protein SmpB	no data	55	99
o	Erwinia amylovora T8	OLJFJH_10155		SsrA-binding protein SmpB	no data	59	90
o	Shewanella loihica PV-4	Shew_1268	smpB	SsrA-binding protein (RefSeq)	no data	56	94
o	Variovorax sp. SCN45	GFF213		tmRNA-binding protein SmpB	cofit	53	99
o	Variovorax sp. OAS795	ABID97_RS16435		SsrA-binding protein SmpB	strong	54	99
o	Serratia liquefaciens MT49	IAI46_19655		SsrA-binding protein SmpB	cofit	62	90
o	Acidovorax sp. GW101-3H11	Ac3H11_2861		tmRNA-binding protein SmpB	no data	55	97
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF4352		tmRNA-binding protein SmpB	no data	54	92
o	Herbaspirillum seropedicae SmR1	HSERO_RS11000		single-stranded DNA-binding protein	no data	55	91
o	Shewanella amazonensis SB2B	Sama_2388	smpB	SsrA-binding protein (RefSeq)	no data	56	92
o	Cupriavidus basilensis FW507-4G11	RR42_RS11775		single-stranded DNA-binding protein	no data	53	93
o	Ralstonia solanacearum PSI07	RPSI07_RS17000		SsrA-binding protein SmpB	no data	53	91
o	Ralstonia solanacearum GMI1000	RS_RS07145		SsrA-binding protein	no data	52	92
o	Vibrio cholerae E7946 ATCC 55056	CSW01_04375		SsrA-binding protein	sig.	52	97
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS00490		SsrA-binding protein SmpB	no data	52	92
o	Ralstonia solanacearum UW163	UW163_RS13820		SsrA-binding protein SmpB	no data	52	92
o	Castellaniella sp019104865 MT123	ABCV34_RS04010		SsrA-binding protein SmpB	no data	51	99
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS11940		SsrA-binding protein SmpB	strong	52	92
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3437.1		tmRNA-binding protein SmpB	no data	52	94
o	Dechlorosoma suillum PS	Dsui_2675		SsrA-binding protein	no data	53	91
o	Lysobacter sp. OAE881	ABIE51_RS11680		SsrA-binding protein SmpB	sig.	52	93
o	Rhodanobacter sp. FW510-T8	OKGIIK_07375	smpB	SsrA-binding protein SmpB	insig.	51	92
o	Rhodanobacter sp000427505 FW510-R12	LRK53_RS11435		SsrA-binding protein SmpB	no data	50	97
o	Methylophilus sp. DMC18	GFF1142		SsrA-binding protein	no data	53	93
o	Rhodanobacter denitrificans MT42	LRK55_RS17780		SsrA-binding protein SmpB	no data	49	97
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS17925		SsrA-binding protein SmpB	no data	49	97
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_00630		SsrA-binding protein	no data	49	92
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS05700		SsrA-binding protein SmpB	strong	50	91
o	Paraburkholderia graminis OAS925	ABIE53_002482		SsrA-binding protein	no data	50	91
o	Burkholderia phytofirmans PsJN	BPHYT_RS12040		single-stranded DNA-binding protein	no data	50	91
o	Shewanella oneidensis MR-1	SO1473	smpB	SsrA-binding protein (NCBI ptt file)	no data	49	94
o	Shewanella sp. ANA-3	Shewana3_2952	smpB	SsrA-binding protein (RefSeq)	no data	48	94
o	Paraburkholderia sabiae LMG 24235	QEN71_RS06520		SsrA-binding protein SmpB	no data	49	90
o	Desulfovibrio vulgaris Miyazaki F	DvMF_2876	smpB	SsrA-binding protein (RefSeq)	no data	48	92
o	Desulfovibrio vulgaris Hildenborough JW710	DVU0828	smpB	SsrA-binding protein (TIGR)	no data	48	92
o	Bifidobacterium breve UCC2003	BBR_RS13045		SsrA-binding protein	no data	49	89
o	Synechococcus elongatus PCC 7942	Synpcc7942_1795	smpB	SsrA-binding protein	no data	44	90
o	Synechocystis sp000284455 PCC 6803	SGL_RS11585		SsrA-binding protein SmpB	no data	43	96
o	Rhodospirillum rubrum S1H	Rru_A1864		SmpB protein (NCBI)	no data	44	93
o	Sphingobium sp. HT1-2	GFF3116		tmRNA-binding protein SmpB	no data	45	89
o	Azospirillum brasilense Sp245	AZOBR_RS08425		single-stranded DNA-binding protein	no data	42	91
o	Sinorhizobium meliloti 1021	SMc02405		SsrA-binding protein	no data	45	92
o	Sphingomonas koreensis DSMZ 15582	Ga0059261_0212		SsrA-binding protein	no data	44	91
o	Rhizobium sp. OAE497	ABIE40_RS06035		SsrA-binding protein SmpB	no data	45	91
o	Azospirillum sp. SherDot2	MPMX19_01218		SsrA-binding protein	no data	42	91
o	Agrobacterium fabrum C58	Atu1025		SSRA-binding protein	no data	47	89
o	Caulobacter crescentus NA1000	CCNA_01254		SsrA-binding protein	no data	46	89
o	Caulobacter crescentus NA1000 Δfur	CCNA_01254		SsrA-binding protein	no data	46	89
o	Fusobacterium nucleatum SB010	HUW76_06090		SsrA-binding protein SmpB	no data	41	93
o	Mycobacterium tuberculosis H37Rv	Rv3100c		Probable SSRA-binding protein SmpB	no data	39	99
o	Phaeobacter inhibens DSM 17395	PGA1_c29450		SsrA-binding protein SmpB	no data	43	97
o	Dinoroseobacter shibae DFL-12	Dshi_0147		SsrA-binding protein (RefSeq)	no data	44	90
o	Magnetospirillum magneticum AMB-1	AMB_RS12810		SsrA-binding protein	no data	41	94
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS14950		SsrA-binding protein	insig.	41	88
o	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS05480		SsrA-binding protein SmpB	no data	40	98
o	Xanthobacter sp. DMC5	GFF405		SsrA-binding protein	no data	40	98
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS16680		SsrA-binding protein	no data	41	92
o	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_04675		SsrA-binding protein	no data	40	86
o	Bacteroides thetaiotaomicron VPI-5482	BT0179		SsrA-binding protein (NCBI ptt file)	no data	39	93
o	Phocaeicola dorei CL03T12C01	ABI39_RS12595		SsrA-binding protein	no data	41	92
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS10920		SsrA-binding protein	strong	39	88
o	Rhodopseudomonas palustris CGA009	TX73_013930		SsrA-binding protein SmpB	no data	37	98
o	Bacteroides ovatus ATCC 8483	BACOVA_01261		SsrA-binding protein	cofit	41	93
o	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2086		SsrA-binding protein	no data	38	94
o	Bosea sp. OAE506	ABIE41_RS19950		SsrA-binding protein SmpB	no data	41	89
o	Cellulophaga baltica 18	M666_RS17575		SsrA-binding protein SmpB	no data	42	86
o	Bacteroides stercoris CC31F	HMPREF1181_RS04945		SsrA-binding protein	no data	37	88
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS00810		SsrA-binding protein SmpB	no data	40	88