Homologs of PP_4341 from Pseudomonas putida KT2440

RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons
SEED: RNA polymerase sigma factor for flagellar operon
KEGG: RNA polymerase sigma factor for flagellar operon FliA

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons strong 100 100
o Pseudomonas sp. BP01 JOY50_RS00585 fliA RNA polymerase sigma factor FliA cofit 99 100
o Pseudomonas sp. SVBP6 COO64_RS25625 fliA RNA polymerase sigma factor FliA cofit 93 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon insig. 90 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18785 flagellar biosynthesis sigma factor strong 90 100
o Pseudomonas syringae pv. syringae B728a Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG strong 89 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG cofit 89 100
o Pseudomonas sp. DMC3 GFF2472 RNA polymerase sigma factor FliA cofit 90 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon insig. 90 100
o Pseudomonas sp. RS175 PFR28_00852 RNA polymerase sigma factor FliA strong 90 100
o Pseudomonas fluorescens FW300-N2C3 AO356_03730 flagellar biosynthesis sigma factor strong 90 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon strong 90 100
o Pseudomonas orientalis W4I3 QF045_RS21835 RNA polymerase sigma factor FliA insig. 89 100
o Pseudomonas simiae WCS417 PS417_19695 flagellar biosynthesis sigma factor strong 89 100
o Pseudomonas fluorescens SBW25 PFLU_RS21660 RNA polymerase sigma factor FliA cofit 89 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21660 RNA polymerase sigma factor FliA strong 89 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04138 RNA polymerase sigma factor FliA cofit 88 100
o Pseudomonas segetis P6 ACVTMO_RS15490 fliA RNA polymerase sigma factor FliA strong 83 99
o Pseudomonas sp. S08-1 OH686_02730 RNA polymerase sigma factor for flagellar operon cofit 86 97
o Pseudomonas aeruginosa MRSN321 DY961_RS05635 fliA;inference=COORDINATES RNA polymerase sigma factor FliA strong 83 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS47155 fliA;inference=COORDINATES RNA polymerase sigma factor FliA strong 83 99
o Pseudomonas stutzeri RCH2 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family strong 84 96
o Pseudomonas aeruginosa PA14 IKLFDK_06920 flagellar biosynthesis sigma factor FliA strong 83 97
o Marinobacter adhaerens HP15 HP15_2302 flagellar biosynthesis sigma factor FliA strong 60 98
o Alteromonas macleodii MIT1002 MIT1002_01103 Sigma-F factor sig. 57 97
o Shewanella loihica PV-4 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) strong 56 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_10335 RNA polymerase sigma factor FliA cofit 56 93
o Shewanella oneidensis MR-1 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) strong 55 93
o Shewanella sp. ANA-3 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) strong 55 93
o Rhodanobacter denitrificans MT42 LRK55_RS13320 RNA polymerase sigma factor FliA cofit 55 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13580 RNA polymerase sigma factor FliA strong 55 99
o Shewanella amazonensis SB2B Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) strong 54 96
o Rhodanobacter sp. FW510-T8 OKGIIK_02830 fliA RNA polymerase sigma factor FliA cofit 55 98
o Lysobacter sp. OAE881 ABIE51_RS16865 RNA polymerase sigma factor FliA strong 54 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS14995 RNA polymerase sigma factor FliA insig. 55 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS20265 RNA polymerase sigma factor FliA insig. 53 96
o Dechlorosoma suillum PS Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family cofit 50 96
o Paraburkholderia graminis OAS925 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA strong 49 96
o Herbaspirillum seropedicae SmR1 HSERO_RS10160 flagellar biosynthesis sigma factor strong 49 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS28940 RNA polymerase sigma factor FliA strong 49 96
o Burkholderia phytofirmans PsJN BPHYT_RS18925 RNA polymerase sigma70 strong 48 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG strong 48 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_21960 fliA RNA polymerase sigma factor FliA cofit 54 91
o Erwinia tracheiphila SCR3 LU632_RS13785 RNA polymerase sigma factor FliA insig. 55 90
o Erwinia amylovora T8 OLJFJH_12555 RNA polymerase sigma factor FliA sig. 53 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2832.1 RNA polymerase sigma factor for flagellar operon cofit 51 94
o Cupriavidus basilensis FW507-4G11 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor insig. 49 95
o Pantoea sp. MT58 IAI47_08160 RNA polymerase sigma factor FliA cofit 52 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02055 RNA polymerase sigma factor FliA cofit 52 91
o Methylophilus sp. DMC18 GFF1338 RNA polymerase sigma factor FliA cofit 45 91
o Dickeya dianthicola 67-19 HGI48_RS13350 RNA polymerase sigma factor FliA cofit 49 95
o Dickeya dianthicola ME23 DZA65_RS13835 RNA polymerase sigma factor FliA strong 49 95
o Serratia liquefaciens MT49 IAI46_15785 RNA polymerase sigma factor FliA cofit 54 89
o Dickeya dadantii 3937 DDA3937_RS13300 RNA polymerase sigma factor FliA strong 51 90
o Enterobacter asburiae PDN3 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family cofit 50 96
o Enterobacter sp. TBS_079 MPMX20_02847 RNA polymerase sigma factor FliA strong 50 96
o Rahnella sp. WP5 EX31_RS09450 RNA polymerase sigma factor FliA cofit 53 90
o Ralstonia solanacearum GMI1000 RS_RS23830 RNA polymerase sigma factor FliA insig. 42 97
o Escherichia coli ECOR27 NOLOHH_16400 fliA RNA polymerase sigma factor FliA strong 49 96
o Escherichia coli ECOR38 HEPCGN_04135 fliA RNA polymerase sigma factor FliA insig. 49 96
o Escherichia coli ECRC100 OKFHMN_25780 fliA RNA polymerase sigma factor FliA cofit 49 96
o Escherichia coli ECRC101 MCAODC_19610 fliA RNA polymerase sigma factor FliA insig. 49 96
o Escherichia coli ECRC102 NIAGMN_02270 fliA RNA polymerase sigma factor FliA insig. 49 96
o Escherichia coli ECRC62 BNILDI_15190 fliA RNA polymerase sigma factor FliA cofit 49 96
o Escherichia coli ECRC98 JDDGAC_00370 fliA RNA polymerase sigma factor FliA insig. 49 96
o Escherichia coli ECRC99 KEDOAH_02310 fliA RNA polymerase sigma factor FliA no data 49 96
o Escherichia coli Nissle 1917 ECOLIN_RS10975 RNA polymerase sigma factor FliA insig. 49 96
o Escherichia coli BW25113 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) sig. 49 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS17485 RNA polymerase sigma factor FliA insig. 41 98
o Ralstonia solanacearum UW163 UW163_RS21665 RNA polymerase sigma factor FliA insig. 41 98
o Escherichia fergusonii Becca EFB2_02023 RNA polymerase sigma factor FliA insig. 49 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01807 RNA polymerase sigma factor FliA insig. 49 96
o Ralstonia solanacearum PSI07 RPSI07_RS06165 RNA polymerase sigma factor FliA insig. 42 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS18040 RNA polymerase sigma factor FliA strong 42 96
o Acidovorax sp. GW101-3H11 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon sig. 42 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1690 RNA polymerase sigma factor for flagellar operon strong 48 96
o Pectobacterium carotovorum WPP14 HER17_RS08355 RNA polymerase sigma factor FliA cofit 49 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1428 RNA polymerase sigma factor for flagellar operon insig. 40 95
o Variovorax sp. SCN45 GFF5774 RNA polymerase sigma factor for flagellar operon insig. 42 95
o Castellaniella sp019104865 MT123 ABCV34_RS05605 RNA polymerase sigma factor FliA sig. 45 91
  Erwinia amylovora T8 OLJFJH_10105 RNA polymerase sigma factor FliA insig. 34 95
o Desulfovibrio vulgaris Miyazaki F DvMF_2011 RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) strong 40 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU3229 fliA RNA polymerase sigma factor for flagellar operon FliA (TIGR) strong 38 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4065 RNA polymerase sigma factor for flagellar operon insig. 36 93
o Sphingobium sp. HT1-2 GFF3722 RNA polymerase sigma factor for flagellar operon cofit 34 96
  Pseudomonas stutzeri RCH2 Psest_4160 RNA polymerase sigma factor, FliA/WhiG family insig. 39 91
  Erwinia tracheiphila SCR3 LU632_RS20475 FliA/WhiG family RNA polymerase sigma factor no data 37 88
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14635 RNA polymerase sigma factor FliA no data 37 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2081 RNA polymerase sigma factor, FliA/WhiG family cofit 34 90
  Escherichia coli Nissle 1917 ECOLIN_RS10960 sigma-70 family RNA polymerase sigma factor no data 67 24
  Mycobacterium tuberculosis H37Rv Rv3286c Alternative RNA polymerase sigma factor SigF insig. 27 90
  Synechocystis sp000284455 PCC 6803 SGL_RS12540 RNA polymerase sigma factor, RpoD/SigA family strong 29 91
  Synechococcus elongatus PCC 7942 Synpcc7942_1746 rpoD2 group2 RNA polymerase sigma factor SigB strong 30 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1726 RNA polymerase sigma factor, sigma-70 family insig. 30 89
  Cellulophaga baltica 18 M666_RS16995 RNA polymerase sigma factor RpoD/SigA strong 27 78
  Variovorax sp. SCN45 GFF6984 RNA polymerase sigma factor for flagellar operon insig. 27 82
  Cellulophaga baltica 18 M666_RS08520 sigma-70 family RNA polymerase sigma factor no data 28 78
  Dechlorosoma suillum PS Dsui_1971 RNA polymerase sigma factor RpoS cofit 29 93
  Phocaeicola dorei CL03T12C01 ABI39_RS13985 RNA polymerase sigma factor RpoD/SigA no data 29 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17770 RNA polymerase sigma factor RpoD/SigA no data 29 78
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16420 RNA polymerase sigma factor RpoD/SigA no data 29 78
  Bacteroides ovatus ATCC 8483 BACOVA_00615 Sigma-70 region 2 no data 28 78
  Bacteroides stercoris CC31F HMPREF1181_RS10780 RNA polymerase sigma factor RpoD/SigA no data 28 78
  Bacteroides thetaiotaomicron VPI-5482 BT1311 RNA polymerase sigma factor rpoD (Sigma-A) (NCBI ptt file) no data 28 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04285 RNA polymerase sigma factor RpoD no data 27 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA no data 27 78
  Rhodospirillum rubrum S1H Rru_A2882 Sigma 70 (RpoD) (NCBI) no data 27 92
  Phaeobacter inhibens DSM 17395 PGA1_c08800 RNA polymerase sigma factor RpoD no data 26 92
  Dinoroseobacter shibae DFL-12 Dshi_2261 RNA polymerase, sigma 70 subunit, RpoD family (RefSeq) no data 26 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04885 RNA polymerase subunit sigma no data 28 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01085 RNA polymerase sigma factor RpoD no data 27 91
  Rhodanobacter denitrificans MT42 LRK55_RS07055 RNA polymerase sigma factor RpoD no data 27 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07325 RNA polymerase sigma factor RpoD no data 27 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13945 RNA polymerase sigma factor RpoD no data 27 91
  Cellulophaga baltica 18 M666_RS16155 RNA polymerase sigma factor RpoD/SigA insig. 26 81
  Rhodanobacter sp. FW510-T8 OKGIIK_13865 rpoD RNA polymerase sigma factor RpoD no data 27 91
  Bosea sp. OAE506 ABIE41_RS11995 RNA polymerase sigma factor RpoD no data 26 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3437 RNA polymerase sigma factor, sigma-70 family no data 26 78
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10595 RNA polymerase sigma factor RpoD no data 27 92
  Synechococcus elongatus PCC 7942 Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD no data 26 90
  Rhizobium sp. OAE497 ABIE40_RS18645 RNA polymerase factor sigma-32 insig. 27 80
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4729.1 RNA polymerase sigma factor RpoD no data 26 91
  Lysobacter sp. OAE881 ABIE51_RS02310 RNA polymerase sigma factor RpoD no data 25 91
  Caulobacter crescentus NA1000 CCNA_03142 RNA polymerase sigma factor rpoD no data 26 92
  Caulobacter crescentus NA1000 Δfur CCNA_03142 RNA polymerase sigma factor rpoD no data 26 92
  Synechocystis sp000284455 PCC 6803 SGL_RS17440 RNA polymerase sigma factor SigF strong 27 96
  Rhodopseudomonas palustris CGA009 TX73_006610 RNA polymerase sigma factor RpoD no data 26 92
  Synechococcus elongatus PCC 7942 Synpcc7942_1849 sigC RNA polymerase sigma factor SigC strong 28 78
  Shewanella sp. ANA-3 Shewana3_3087 RNA polymerase, sigma 70 subunit, RpoD (RefSeq) no data 26 91
  Shewanella oneidensis MR-1 SO1284 rpoD RNA polymerase sigma-70 factor (NCBI ptt file) no data 26 91
  Magnetospirillum magneticum AMB-1 AMB_RS03585 RNA polymerase sigma factor RpoD no data 27 92
  Synechococcus elongatus PCC 7942 Synpcc7942_0672 rpoD3 RNA polymerase sigma factor SigD sig. 31 90
  Synechocystis sp000284455 PCC 6803 SGL_RS07740 RNA polymerase sigma factor, RpoD/SigA family strong 29 91
  Desulfovibrio vulgaris Miyazaki F DvMF_0494 RNA polymerase, sigma 70 subunit, RpoD subfamily (RefSeq) no data 26 90
  Synechococcus elongatus PCC 7942 Synpcc7942_1557 rpoD6 principal RNA polymerase sigma factor SigA strong 31 78
  Shewanella amazonensis SB2B Sama_0823 RNA polymerase sigma-70 factor (RefSeq) no data 26 91
  Vibrio cholerae E7946 ATCC 55056 CSW01_02745 RNA polymerase sigma factor RpoD no data 26 91
  Desulfovibrio vulgaris Hildenborough JW710 DVU1788 rpoD RNA polymerase sigma-70 factor (TIGR) no data 26 90
  Sphingobium sp. HT1-2 GFF2093 RNA polymerase sigma factor RpoD no data 25 92
  Xanthobacter sp. DMC5 GFF3244 RNA polymerase sigma factor RpoD no data 25 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0818 RNA polymerase sigma factor, sigma-70 family no data 26 91
  Mycobacterium tuberculosis H37Rv Rv2710 RNA polymerase sigma factor SigB no data 30 78
  Sinorhizobium meliloti 1021 SMc03873 RNA polymerase factor sigma-32 insig. 29 79
  Klebsiella michiganensis M5al BWI76_RS24555 RNA polymerase sigma factor RpoD no data 26 91
  Klebsiella pneumoniae MKP103 KDGMDA_05365 RNA polymerase sigma factor RpoD no data 26 91
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4238 RNA polymerase sigma factor RpoD, C-terminal domain no data 25 92
  Escherichia coli BL21 ECD_02937 RNA polymerase, sigma 70 (sigma D) factor no data 26 91
  Escherichia fergusonii Becca EFB2_00744 RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECOR27 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECOR38 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECRC100 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECRC101 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECRC102 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECRC62 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECRC98 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli ECRC99 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00635 RNA polymerase sigma factor RpoD no data 26 91
  Enterobacter asburiae PDN3 EX28DRAFT_3102 RNA polymerase, sigma 70 subunit, RpoD no data 26 91
  Enterobacter sp. TBS_079 MPMX20_03909 RNA polymerase sigma factor RpoD no data 26 91
  Escherichia coli BW25113 b3067 rpoD RNA polymerase sigma factor (NCBI) no data 26 91
  Klebsiella pneumoniae MRSN742743 KFA93_RS12625 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 26 91
  Sinorhizobium meliloti 1021 SMc01563 RNA polymerase sigma factor RpoD no data 26 92
  Synechocystis sp000284455 PCC 6803 SGL_RS17245 RNA polymerase sigma factor RpoD no data 25 90
  Pseudomonas sp. S08-1 OH686_14970 RNA polymerase sigma factor RpoD no data 26 91
  Agrobacterium fabrum C58 Atu2167 RNA polymerase sigma factor RpoD no data 26 92
  Azospirillum sp. SherDot2 MPMX19_00761 RNA polymerase sigma factor RpoD no data 26 92
  Rhizobium sp. OAE497 ABIE40_RS12720 RNA polymerase sigma factor RpoD no data 26 92
  Azospirillum brasilense Sp245 AZOBR_RS10905 RNA polymerase sigma factor RpoD no data 26 92
  Dickeya dadantii 3937 DDA3937_RS02945 RNA polymerase sigma factor RpoD no data 26 91
  Dickeya dianthicola 67-19 HGI48_RS03110 RNA polymerase sigma factor RpoD no data 26 91
  Dickeya dianthicola ME23 DZA65_RS03105 RNA polymerase sigma factor RpoD no data 26 91
  Rahnella sp. WP5 EX31_RS08195 RNA polymerase sigma factor RpoD no data 26 91
  Cupriavidus basilensis FW507-4G11 RR42_RS13185 RNA polymerase sigma factor RpoS strong 30 90
  Shewanella loihica PV-4 Shew_0996 RpoD family RNA polymerase sigma factor (RefSeq) no data 26 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14330 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Erwinia tracheiphila SCR3 LU632_RS20725 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Erwinia amylovora T8 OLJFJH_07585 RNA polymerase sigma factor RpoD no data 26 91
  Pectobacterium carotovorum WPP14 HER17_RS18415 RNA polymerase sigma factor RpoD no data 26 91
  Herbaspirillum seropedicae SmR1 HSERO_RS14830 RNA polymerase sigma factor RpoS insig. 25 91
  Magnetospirillum magneticum AMB-1 AMB_RS14115 RNA polymerase sigma factor RpoH no data 28 91
  Serratia liquefaciens MT49 IAI46_22125 RNA polymerase sigma factor RpoD no data 26 91
  Pantoea sp. MT58 IAI47_03050 RNA polymerase sigma factor RpoD no data 26 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11870 RNA polymerase sigma factor RpoD no data 26 91
  Dinoroseobacter shibae DFL-12 Dshi_2978 RNA polymerase, sigma 32 subunit, RpoH (RefSeq) strong 26 90
  Pseudomonas aeruginosa MRSN321 DY961_RS22905 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas aeruginosa PA14 IKLFDK_22530 RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS36440 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 26 91
  Marinobacter adhaerens HP15 HP15_3857 RNA polymerase, sigma 70 subunit, RpoD family insig. 27 85
  Acinetobacter baumannii LAC-4 RR41_RS03995 RNA polymerase sigma factor RpoD no data 26 91
  Acinetobacter radioresistens SK82 MPMX26_00713 RNA polymerase sigma factor RpoD no data 26 91
  Marinobacter adhaerens HP15 HP15_315 RNA polymerase, sigma 70 subunit, RpoD no data 26 91
  Pseudomonas sp. DMC3 GFF51 RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas sp. RS175 PFR28_04078 RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1186 RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas fluorescens FW300-N2E3 AO353_07385 RNA polymerase subunit sigma-70 no data 26 91
  Bifidobacterium breve UCC2003 BBR_RS16480 RNA polymerase sigma factor no data 28 78
  Pseudomonas segetis P6 ACVTMO_RS04280 rpoD RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2513 RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas fluorescens FW300-N2C3 AO356_14265 RNA polymerase subunit sigma-70 no data 26 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4791 RNA polymerase sigma factor RpoD no data 26 91
  Synechocystis sp000284455 PCC 6803 SGL_RS14610 RNA polymerase sigma factor SigC cofit 29 77
  Pseudomonas stutzeri RCH2 Psest_3682 RNA polymerase sigma factor, sigma-70 family no data 26 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3177 RNA polymerase sigma factor RpoD no data 26 91
  Pseudomonas syringae pv. syringae B728a Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 26 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 26 91
  Synechococcus elongatus PCC 7942 Synpcc7942_0569 rpoD4 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like strong 27 78
  Phaeobacter inhibens DSM 17395 PGA1_c26660 RNA polymerase sigma-32 factor RpoH insig. 26 80
  Pseudomonas sp. S08-1 OH686_18185 RNA polymerase sigma factor RpoS cofit 25 90
  Azospirillum brasilense Sp245 AZOBR_RS00930 RNA polymerase sigma 70 insig. 26 91
  Pseudomonas sp. BP01 JOY50_RS18070 rpoD RNA polymerase sigma factor RpoD no data 25 91
  Pseudomonas sp. SVBP6 COO64_RS22580 rpoD RNA polymerase sigma factor RpoD no data 25 91
  Pseudomonas orientalis W4I3 QF045_RS00280 RNA polymerase sigma factor RpoD no data 25 91
  Pseudomonas putida KT2440 PP_0387 RNA polymerase, sigma 70 (sigma D) factor no data 25 91
  Alteromonas macleodii MIT1002 MIT1002_00733 Sigma-70 no data 26 91
  Pseudomonas fluorescens SBW25 PFLU_RS27535 RNA polymerase sigma factor RpoD no data 25 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27535 RNA polymerase sigma factor RpoD no data 25 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05296 RNA polymerase sigma factor RpoD no data 25 91
  Pseudomonas simiae WCS417 PS417_25880 RNA polymerase subunit sigma-70 no data 25 91
  Pseudomonas segetis P6 ACVTMO_RS16960 rpoS RNA polymerase sigma factor RpoS strong 25 90
  Ralstonia solanacearum PSI07 RPSI07_RS07910 RNA polymerase sigma factor insig. 27 86
  Synechocystis sp000284455 PCC 6803 SGL_RS07975 RNA polymerase sigma factor, RpoD/SigA family strong 27 94
  Marinobacter adhaerens HP15 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family strong 26 90
  Shewanella oneidensis MR-1 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) sig. 26 94
  Shewanella sp. ANA-3 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) sig. 26 94
  Alteromonas macleodii MIT1002 MIT1002_00625 RNA polymerase sigma factor RpoS strong 26 79
  Cupriavidus basilensis FW507-4G11 RR42_RS10750 DNA-directed RNA polymerase sigma-70 factor no data 24 92
  Ralstonia solanacearum PSI07 RPSI07_RS18140 RNA polymerase sigma factor RpoS strong 28 93
  Paraburkholderia graminis OAS925 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor strong 27 93
  Mycobacterium tuberculosis H37Rv Rv2703 RNA polymerase sigma factor SigA (sigma-A) no data 28 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15235 RNA polymerase sigma factor RpoS strong 28 90
  Ralstonia solanacearum UW163 UW163_RS12700 RNA polymerase sigma factor RpoS sig. 28 90
  Burkholderia phytofirmans PsJN BPHYT_RS09115 RNA polymerase sigma factor RpoS sig. 27 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS no data 27 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS22240 RNA polymerase sigma factor RpoS cofit 27 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_02835 RNA polymerase sigma factor RpoS cofit 26 79
  Methylophilus sp. DMC18 GFF2349 RNA polymerase sigma factor RpoD no data 26 91
  Castellaniella sp019104865 MT123 ABCV34_RS02695 RNA polymerase sigma factor RpoD no data 26 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS10875 RNA polymerase sigma factor RpoS strong 28 93
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17500 rpoS RNA polymerase sigma factor RpoS strong 26 90
  Erwinia tracheiphila SCR3 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS strong 26 90
  Acidovorax sp. GW101-3H11 Ac3H11_194 RNA polymerase sigma factor RpoD no data 25 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS15600 RNA polymerase sigma factor RpoD no data 25 92
  Ralstonia solanacearum GMI1000 RS_RS11120 RNA polymerase sigma factor RpoD no data 25 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16485 RNA polymerase sigma factor RpoD/SigA insig. 25 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03675 RNA polymerase sigma factor RpoD no data 25 92
  Ralstonia solanacearum PSI07 RPSI07_RS13555 RNA polymerase sigma factor RpoD no data 25 92
  Ralstonia solanacearum UW163 UW163_RS09995 RNA polymerase sigma factor RpoD no data 25 92
  Pseudomonas aeruginosa PA14 IKLFDK_18495 RNA polymerase sigma factor RpoS strong 25 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS42260 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 25 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3822 RNA polymerase sigma factor RpoD no data 24 92