Homologs of PP_0567 from Pseudomonas putida KT2440

Biosynthetic arginine decarboxylase
SEED: Biosynthetic arginine decarboxylase (EC 4.1.1.19)
KEGG: arginine decarboxylase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0567 Biosynthetic arginine decarboxylase strong 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_43 Biosynthetic arginine decarboxylase (EC 4.1.1.19) strong 95 100
o Pseudomonas sp. RS175 PFR28_05228 Biosynthetic arginine decarboxylase sig. 95 100
o Pseudomonas fluorescens FW300-N2C3 AO356_08155 arginine decarboxylase strong 95 100
o Pseudomonas fluorescens FW300-N2E3 AO353_13720 arginine decarboxylase strong 95 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3504 Biosynthetic arginine decarboxylase (EC 4.1.1.19) sig. 95 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1296 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) strong 94 100
o Pseudomonas simiae WCS417 PS417_03005 arginine decarboxylase sig. 94 100
o Pseudomonas fluorescens SBW25 PFLU_RS03080 arginine decarboxylase cofit 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03080 arginine decarboxylase strong 94 100
o Pseudomonas syringae pv. syringae B728a Psyr_4381 arginine decarboxylase cofit 94 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4381 arginine decarboxylase sig. 94 100
o Pseudomonas sp. S08-1 OH686_07545 arginine decarboxylase cofit 85 100
o Pseudomonas stutzeri RCH2 Psest_3366 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) sig. 84 100
o Rhodanobacter sp. FW510-T8 OKGIIK_15625 speA biosynthetic arginine decarboxylase no data 49 98
o Marinobacter adhaerens HP15 HP15_272 biosynthetic arginine decarboxylase strong 49 98
o Shewanella amazonensis SB2B Sama_1963 arginine decarboxylase (RefSeq) strong 48 98
o Shewanella oneidensis MR-1 SO1870 speA biosynthetic arginine decarboxylase (NCBI ptt file) strong 48 98
o Lysobacter sp. OAE881 ABIE51_RS00125 arginine decarboxylase no data 48 98
o Rhodanobacter denitrificans MT42 LRK55_RS08670 arginine decarboxylase no data 48 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS09140 arginine decarboxylase no data 48 98
o Shewanella sp. ANA-3 Shewana3_1624 arginine decarboxylase (RefSeq) strong 47 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4909.1 Biosynthetic arginine decarboxylase (EC 4.1.1.19) no data 47 99
o Shewanella loihica PV-4 Shew_1619 arginine decarboxylase (RefSeq) no data 48 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15580 biosynthetic arginine decarboxylase no data 48 98
  Rhodanobacter denitrificans MT42 LRK55_RS08900 arginine decarboxylase insig. 46 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_18235 arginine decarboxylase insig. 46 97
o Kangiella aquimarina DSM 16071 B158DRAFT_1811 arginine decarboxylase (EC 4.1.1.19) insig. 44 98
o Rahnella sp. WP5 EX31_RS21355 biosynthetic arginine decarboxylase insig. 45 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) strong 45 96
o Serratia liquefaciens MT49 IAI46_21140 biosynthetic arginine decarboxylase insig. 45 96
o Escherichia fergusonii Becca EFB2_00962 Biosynthetic arginine decarboxylase insig. 45 96
o Escherichia coli ECOR27 NOLOHH_11175 speA biosynthetic arginine decarboxylase strong 45 96
o Escherichia coli ECOR38 HEPCGN_18610 speA biosynthetic arginine decarboxylase strong 45 96
o Escherichia coli ECRC101 OKFHMN_19305 speA biosynthetic arginine decarboxylase sig. 45 96
o Escherichia coli ECRC101 MCAODC_09825 speA biosynthetic arginine decarboxylase strong 45 96
o Escherichia coli ECRC102 NIAGMN_17070 speA biosynthetic arginine decarboxylase sig. 45 96
o Escherichia coli ECRC62 BNILDI_09755 speA biosynthetic arginine decarboxylase insig. 45 96
o Escherichia coli ECRC98 JDDGAC_22935 speA biosynthetic arginine decarboxylase no data 45 96
o Escherichia coli ECRC99 KEDOAH_08835 speA biosynthetic arginine decarboxylase no data 45 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00778 Biosynthetic arginine decarboxylase cofit 45 96
o Escherichia coli Nissle 1917 ECOLIN_RS16350 biosynthetic arginine decarboxylase cofit 45 96
o Escherichia coli BL21 ECD_02768 biosynthetic arginine decarboxylase, PLP-binding strong 45 96
o Escherichia coli BW25113 b2938 speA arginine decarboxylase (NCBI) strong 45 96
o Erwinia tracheiphila SCR3 LU632_RS05510 speA biosynthetic arginine decarboxylase insig. 45 96
o Dickeya dianthicola 67-19 HGI48_RS18460 biosynthetic arginine decarboxylase cofit 45 96
o Dickeya dianthicola ME23 DZA65_RS19595 biosynthetic arginine decarboxylase insig. 45 96
o Pantoea sp. MT58 IAI47_03660 biosynthetic arginine decarboxylase insig. 44 96
o Pectobacterium carotovorum WPP14 HER17_RS02665 biosynthetic arginine decarboxylase insig. 45 96
o Dickeya dadantii 3937 DDA3937_RS18535 biosynthetic arginine decarboxylase cofit 44 96
o Klebsiella michiganensis M5al BWI76_RS24030 arginine decarboxylase strong 45 96
o Enterobacter sp. TBS_079 MPMX20_03799 Biosynthetic arginine decarboxylase insig. 44 96
o Enterobacter asburiae PDN3 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) insig. 44 96
o Bacteroides thetaiotaomicron VPI-5482 BT3394 putative arginine decarboxylase (NCBI ptt file) strong 40 98
o Bacteroides ovatus ATCC 8483 BACOVA_01911 arginine 2-monooxygenase strong 40 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS15005 biosynthetic arginine decarboxylase cofit 41 98
o Bacteroides stercoris CC31F HMPREF1181_RS02535 biosynthetic arginine decarboxylase strong 41 98
o Phocaeicola dorei CL03T12C01 ABI39_RS04690 biosynthetic arginine decarboxylase strong 40 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12110 biosynthetic arginine decarboxylase strong 40 98
o Desulfovibrio vulgaris Miyazaki F DvMF_1536 arginine decarboxylase (RefSeq) cofit 40 98
o Synechococcus elongatus PCC 7942 Synpcc7942_1037 speA arginine decarboxylase no data 40 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU0417 speA arginine decarboxylase (TIGR) cofit 39 98
o Alteromonas macleodii MIT1002 MIT1002_03905 Biosynthetic arginine decarboxylase strong 38 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1341 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 29 40
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10500 arginine decarboxylase no data 21 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2474 Diaminopimelate decarboxylase strong 23 49
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07675 arginine decarboxylase no data 20 47
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01600 arginine decarboxylase no data 23 47
  Caulobacter crescentus NA1000 CCNA_02296 diaminopimelate decarboxylase no data 31 41
  Caulobacter crescentus NA1000 Δfur CCNA_02296 diaminopimelate decarboxylase no data 31 41
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02390 diaminopimelate decarboxylase insig. 28 45
  Azospirillum brasilense Sp245 AZOBR_RS10225 diaminopimelate decarboxylase insig. 27 45
  Desulfovibrio vulgaris Miyazaki F DvMF_0664 Orn/DAP/Arg decarboxylase 2 (RefSeq) sig. 25 49
  Synechococcus elongatus PCC 7942 Synpcc7942_0262 lysA diaminopimelate decarboxylase no data 34 23
  Variovorax sp. SCN45 GFF5315 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 26 40
  Ralstonia solanacearum PSI07 RPSI07_RS10250 diaminopimelate decarboxylase no data 28 40
  Sinorhizobium meliloti 1021 SMc00723 diaminopimelate DAP decarboxylase no data 27 41
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12130 diaminopimelate decarboxylase insig. 31 30
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10180 diaminopimelate decarboxylase no data 30 41
  Variovorax sp. OAS795 ABID97_RS23305 diaminopimelate decarboxylase no data 26 40
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06990 diaminopimelate decarboxylase no data 28 40
  Ralstonia solanacearum UW163 UW163_RS06625 diaminopimelate decarboxylase no data 28 40
  Ralstonia solanacearum GMI1000 RS_RS14930 diaminopimelate decarboxylase no data 28 40
  Marinobacter adhaerens HP15 HP15_247 diaminopimelate decarboxylase no data 27 40
  Herbaspirillum seropedicae SmR1 HSERO_RS00950 diaminopimelate decarboxylase no data 28 40
  Desulfovibrio vulgaris Miyazaki F DvMF_0353 diaminopimelate decarboxylase (RefSeq) sig. 29 32
  Pseudomonas syringae pv. syringae B728a Psyr_0182 diaminopimelate decarboxylase no data 30 39
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0182 diaminopimelate decarboxylase no data 30 39
  Cupriavidus basilensis FW507-4G11 RR42_RS19050 diaminopimelate decarboxylase no data 27 40
  Phaeobacter inhibens DSM 17395 PGA1_c03470 diaminopimelate decarboxylase LysA no data 27 41
  Ralstonia sp. UNC404CL21Col ABZR87_RS02640 diaminopimelate decarboxylase strong 27 43
  Paraburkholderia sabiae LMG 24235 QEN71_RS28080 diaminopimelate decarboxylase strong 27 39
  Agrobacterium fabrum C58 Atu3601 diaminopimelate decarboxylase no data 25 47
  Shewanella loihica PV-4 Shew_0322 diaminopimelate decarboxylase (RefSeq) strong 29 37
  Castellaniella sp019104865 MT123 ABCV34_RS12685 diaminopimelate decarboxylase no data 28 40
  Vibrio cholerae E7946 ATCC 55056 CSW01_00635 diaminopimelate decarboxylase insig. 27 40
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2174 Diaminopimelate decarboxylase (EC 4.1.1.20) no data 29 40
  Pseudomonas fluorescens GW456-L13 PfGW456L13_845 Diaminopimelate decarboxylase (EC 4.1.1.20) strong 28 41
  Bacteroides ovatus ATCC 8483 BACOVA_00215 diaminopimelate decarboxylase strong 25 38
  Shewanella amazonensis SB2B Sama_3250 diaminopimelate decarboxylase (RefSeq) strong 27 44