Homologs of GFF83 from Xanthobacter sp. DMC5

putative transcriptional regulatory protein
SEED: FIG000859: hypothetical protein YebC

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Xanthobacter sp. DMC5	GFF83		putative transcriptional regulatory protein	no data	100	100
o	Agrobacterium fabrum C58	Atu3727		hypothetical protein	strong	71	100
o	Rhodopseudomonas palustris CGA009	TX73_005640		YebC/PmpR family DNA-binding transcriptional regulator	sig.	77	100
o	Sinorhizobium meliloti 1021	SMc03969		hypothetical protein	strong	69	100
o	Bosea sp. OAE506	ABIE41_RS09460		YebC/PmpR family DNA-binding transcriptional regulator	strong	67	99
o	Rhizobium sp. OAE497	ABIE40_RS15665		YebC/PmpR family DNA-binding transcriptional regulator	insig.	67	100
o	Sphingobium sp. HT1-2	GFF491		Probable transcriptional regulatory protein YebC	no data	65	99
o	Azospirillum brasilense Sp245	AZOBR_RS09035		transcriptional regulator	insig.	66	100
o	Azospirillum sp. SherDot2	MPMX19_00695		putative transcriptional regulatory protein	insig.	66	100
o	Phaeobacter inhibens DSM 17395	PGA1_c21770		DNA-binding regulatory protein, YebC/PmpR family	no data	62	99
o	Dinoroseobacter shibae DFL-12	Dshi_2762		protein of unknown function DUF28 (RefSeq)	strong	63	99
o	Sphingomonas koreensis DSMZ 15582	Ga0059261_0824		DNA-binding regulatory protein, YebC/PmpR family	no data	62	99
o	Magnetospirillum magneticum AMB-1	AMB_RS16265		YebC/PmpR family DNA-binding transcriptional regulator	no data	65	99
o	Rhodospirillum rubrum S1H	Rru_A1086		hypothetical protein (RefSeq)	strong	63	100
o	Caulobacter crescentus NA1000	CCNA_03352		YebC/PmpR transcriptional regulator	strong	60	99
o	Caulobacter crescentus NA1000 Δfur	CCNA_03352		YebC/PmpR transcriptional regulator	cofit	60	99
o	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS15840		YebC/PmpR family DNA-binding transcriptional regulator	no data	53	100
o	Desulfovibrio vulgaris Hildenborough JW710	DVU2259		conserved hypothetical protein TIGR01033 (TIGR)	strong	54	100
o	Desulfovibrio vulgaris Miyazaki F	DvMF_3201		hypothetical protein (RefSeq)	strong	58	99
o	Pseudomonas syringae pv. syringae B728a	Psyr_1407		Protein of unknown function DUF28	insig.	48	99
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_1407		Protein of unknown function DUF28	insig.	48	99
o	Pseudomonas stutzeri RCH2	Psest_1494		DNA-binding regulatory protein, YebC/PmpR family	no data	50	99
o	Pseudomonas sp. SVBP6	COO64_RS20085		YebC/PmpR family DNA-binding transcriptional regulator	insig.	48	99
o	Fusobacterium nucleatum SB010	HUW76_01460		YebC/PmpR family DNA-binding transcriptional regulator	strong	49	99
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_1850		FIG000859: hypothetical protein YebC	strong	48	99
o	Pseudomonas fluorescens FW300-N2C3	AO356_18010		hypothetical protein	strong	48	99
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_5534		FIG000859: hypothetical protein YebC	strong	48	99
o	Dechlorosoma suillum PS	Dsui_0489		DNA-binding regulatory protein, YebC/PmpR family	strong	50	94
o	Methylophilus sp. DMC18	GFF2324		Transcriptional regulatory protein PmpR	cofit	51	94
o	Pseudomonas sp. S08-1	OH686_19120		Probable transcriptional regulatory protein YebC	sig.	50	99
o	Serratia liquefaciens MT49	IAI46_14635		YebC/PmpR family DNA-binding transcriptional regulator	cofit	48	99
o	Shewanella loihica PV-4	Shew_2078		hypothetical protein (RefSeq)	no data	48	99
o	Pseudomonas segetis P6	MPMX49_01682		Transcriptional regulatory protein PmpR	insig.	48	99
o	Pseudomonas sp. RS175	PFR28_03415		Transcriptional regulatory protein PmpR	strong	47	99
o	Dickeya dadantii 3937	DDA3937_RS10065		YebC/PmpR family DNA-binding transcriptional regulator	insig.	49	99
o	Escherichia coli BL21	ECD_01835		UPF0082 family protein	insig.	48	99
o	Escherichia fergusonii Becca	EFB2_02078		putative transcriptional regulatory protein YebC	insig.	48	99
o	Escherichia coli ECOR27	NOLOHH_16700		putative transcriptional regulatory protein YebC	insig.	48	99
o	Escherichia coli ECOR38	HEPCGN_04665		putative transcriptional regulatory protein YebC	insig.	48	99
o	Escherichia coli ECRC100	OKFHMN_26255		putative transcriptional regulatory protein YebC	cofit	48	99
o	Escherichia coli ECRC101	MCAODC_19150		putative transcriptional regulatory protein YebC	insig.	48	99
o	Escherichia coli ECRC102	NIAGMN_01805		putative transcriptional regulatory protein YebC	no data	48	99
o	Escherichia coli ECRC62	BNILDI_15490		putative transcriptional regulatory protein YebC	insig.	48	99
o	Escherichia coli ECRC98	JDDGAC_00830		putative transcriptional regulatory protein YebC	insig.	48	99
o	Escherichia coli ECRC99	KEDOAH_01850		putative transcriptional regulatory protein YebC	no data	48	99
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_01864		putative transcriptional regulatory protein YebC	insig.	48	99
o	Escherichia coli Nissle 1917	ECOLIN_RS10380		YebC/PmpR family DNA-binding transcriptional regulator	insig.	48	99
o	Dickeya dianthicola 67-19	HGI48_RS10095		YebC/PmpR family DNA-binding transcriptional regulator	insig.	49	99
o	Dickeya dianthicola ME23	DZA65_RS10510		YebC/PmpR family DNA-binding transcriptional regulator	insig.	49	99
o	Escherichia coli BW25113	b1864	yebC	hypothetical protein (NCBI)	sig.	47	99
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF1645		FIG000859: hypothetical protein YebC	insig.	47	99
o	Pseudomonas sp. DMC3	GFF5187		Transcriptional regulatory protein PmpR	insig.	47	99
o	Klebsiella pneumoniae MKP103	KDGMDA_25425		putative transcriptional regulatory protein KPK_1906	sig.	48	99
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS02315		YebC/PmpR family DNA-binding transcriptional regulator	cofit	48	99
o	Pectobacterium carotovorum WPP14	HER17_RS11855		YebC/PmpR family DNA-binding transcriptional regulator	insig.	49	97
o	Pseudomonas aeruginosa MRSN321	DY961_RS07610		YebC/PmpR family DNA-binding transcriptional regulator	strong	47	99
o	Pseudomonas aeruginosa PA14	IKLFDK_04360		YebC/PmpR family DNA-binding transcriptional regulator	strong	47	99
o	Pseudomonas aeruginosa PUPa3	DQ20_RS45180		YebC/PmpR family DNA-binding transcriptional regulator	no data	47	99
o	Shewanella oneidensis MR-1	SO2432		conserved hypothetical protein TIGR01033 (NCBI ptt file)	strong	48	99
o	Pseudomonas sp. BP01	JOY50_RS01830		YebC/PmpR family DNA-binding transcriptional regulator	cofit	47	99
o	Rahnella sp. WP5	EX31_RS11685		YebC/PmpR family DNA-binding transcriptional regulator	insig.	47	99
o	Pseudomonas putida KT2440	PP_1214		putative transcriptional regulatory protein	sig.	47	99
o	Enterobacter asburiae PDN3	EX28DRAFT_0693		DNA-binding regulatory protein, YebC/PmpR family	insig.	47	99
o	Shewanella sp. ANA-3	Shewana3_1954		hypothetical protein (RefSeq)	insig.	48	99
o	Klebsiella michiganensis M5al	BWI76_RS18160		YebC/PmpR family DNA-binding transcriptional regulator	no data	48	99
o	Erwinia tracheiphila HP pepo 2.2	IJEDHG_22125	tACO1	YebC/PmpR family DNA-binding transcriptional regulator	no data	47	99
o	Erwinia tracheiphila SCR3	LU632_RS13425		YebC/PmpR family DNA-binding transcriptional regulator	insig.	47	99
o	Pantoea sp. MT58	IAI47_08435		YebC/PmpR family DNA-binding transcriptional regulator	strong	47	99
o	Erwinia amylovora T8	OLJFJH_12845		YebC/PmpR family DNA-binding transcriptional regulator	insig.	47	99
o	Castellaniella sp019104865 MT123	ABCV34_RS02555		YebC/PmpR family DNA-binding transcriptional regulator	insig.	46	97
o	Shewanella amazonensis SB2B	Sama_1842		hypothetical protein (RefSeq)	insig.	46	99
o	Kangiella aquimarina DSM 16071	B158DRAFT_1123		DNA-binding regulatory protein, YebC/PmpR family	strong	46	96
o	Enterobacter sp. TBS_079	MPMX20_02769		putative transcriptional regulatory protein YebC	sig.	46	99
o	Pseudomonas fluorescens FW300-N2E3	AO353_03595		hypothetical protein	strong	47	99
o	Cupriavidus basilensis FW507-4G11	RR42_RS04735		hypothetical protein	strong	46	95
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_640		FIG000859: hypothetical protein YebC	no data	47	99
o	Herbaspirillum seropedicae SmR1	HSERO_RS17750		transcriptional regulator	no data	45	95
o	Burkholderia phytofirmans PsJN	BPHYT_RS06410		transcriptional regulator	sig.	48	97
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04522		DNA-binding regulatory protein, YebC/PmpR family	no data	48	97
o	Paraburkholderia graminis OAS925	ABIE53_001546		YebC/PmpR family DNA-binding regulatory protein	sig.	48	97
o	Acinetobacter baumannii LAC-4	RR41_RS11700		YebC/PmpR family DNA-binding transcriptional regulator	no data	44	100
o	Acinetobacter radioresistens SK82	MPMX26_01851		putative transcriptional regulatory protein YebC	cofit	44	100
o	Marinobacter adhaerens HP15	HP15_2043		protein YebC	insig.	42	99
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS15405		YebC/PmpR family DNA-binding transcriptional regulator	sig.	48	95
o	Pseudomonas fluorescens SBW25	PFLU_RS24100		YebC/PmpR family DNA-binding transcriptional regulator	cofit	45	100
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS24100		YebC/PmpR family DNA-binding transcriptional regulator	strong	45	100
o	Pseudomonas simiae WCS417	PS417_22460		hypothetical protein	no data	45	100
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_04644		Transcriptional regulatory protein PmpR	cofit	45	99
o	Paraburkholderia sabiae LMG 24235	QEN71_RS24395		YebC/PmpR family DNA-binding transcriptional regulator	strong	48	97
o	Ralstonia solanacearum PSI07	RPSI07_RS13685		YebC/PmpR family DNA-binding transcriptional regulator	no data	46	95
o	Ralstonia solanacearum GMI1000	RS_RS10990		YebC/PmpR family DNA-binding transcriptional regulator	sig.	46	95
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS03540		YebC/PmpR family DNA-binding transcriptional regulator	no data	45	95
o	Ralstonia solanacearum UW163	UW163_RS10130		YebC/PmpR family DNA-binding transcriptional regulator	no data	45	95
o	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_01650		YebC/PmpR family DNA-binding transcriptional regulator	strong	44	99
o	Synechocystis sp000284455 PCC 6803	SGL_RS12485		YebC/PmpR family DNA-binding transcriptional regulator	strong	44	98
o	Lysobacter sp. OAE881	ABIE51_RS05035		YebC/PmpR family DNA-binding transcriptional regulator	insig.	48	95
o	Synechococcus elongatus PCC 7942	Synpcc7942_1017		hypothetical protein	insig.	42	100
o	Variovorax sp. OAS795	ABID97_RS16740		YebC/PmpR family DNA-binding transcriptional regulator	strong	47	97
o	Variovorax sp. SCN45	GFF303		Probable transcriptional regulatory protein YebC	cofit	48	97
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1434.1		FIG000859: hypothetical protein YebC	insig.	49	92