Homologs of GFF5774 from Variovorax sp. SCN45

RNA polymerase sigma factor for flagellar operon
SEED: RNA polymerase sigma factor for flagellar operon
KEGG: RNA polymerase sigma factor for flagellar operon FliA

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5774 RNA polymerase sigma factor for flagellar operon insig. 100 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS28940 RNA polymerase sigma factor FliA strong 58 99
o Paraburkholderia graminis OAS925 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA strong 57 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG strong 57 100
o Burkholderia phytofirmans PsJN BPHYT_RS18925 RNA polymerase sigma70 strong 56 100
o Cupriavidus basilensis FW507-4G11 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor insig. 57 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS17485 RNA polymerase sigma factor FliA insig. 59 99
o Ralstonia solanacearum UW163 UW163_RS21665 RNA polymerase sigma factor FliA insig. 59 99
o Herbaspirillum seropedicae SmR1 HSERO_RS10160 flagellar biosynthesis sigma factor strong 56 99
o Ralstonia solanacearum GMI1000 RS_RS23830 RNA polymerase sigma factor FliA insig. 57 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS18040 RNA polymerase sigma factor FliA strong 57 99
o Ralstonia solanacearum PSI07 RPSI07_RS06165 RNA polymerase sigma factor FliA insig. 58 99
o Methylophilus sp. DMC18 GFF1338 RNA polymerase sigma factor FliA cofit 54 99
o Acidovorax sp. GW101-3H11 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon sig. 53 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1428 RNA polymerase sigma factor for flagellar operon insig. 52 99
o Dechlorosoma suillum PS Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family cofit 52 98
o Rahnella sp. WP5 EX31_RS09450 RNA polymerase sigma factor FliA cofit 48 99
o Dickeya dadantii 3937 DDA3937_RS13300 RNA polymerase sigma factor FliA strong 48 98
o Dickeya dianthicola 67-19 HGI48_RS13350 RNA polymerase sigma factor FliA cofit 48 98
o Dickeya dianthicola ME23 DZA65_RS13835 RNA polymerase sigma factor FliA strong 48 98
o Pectobacterium carotovorum WPP14 HER17_RS08355 RNA polymerase sigma factor FliA cofit 48 99
o Castellaniella sp019104865 MT123 ABCV34_RS05605 RNA polymerase sigma factor FliA sig. 52 95
o Escherichia coli Nissle 1917 ECOLIN_RS10975 RNA polymerase sigma factor FliA insig. 48 100
o Escherichia coli BW25113 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) sig. 48 100
o Escherichia coli ECOR27 NOLOHH_16400 fliA RNA polymerase sigma factor FliA strong 48 100
o Escherichia coli ECOR38 HEPCGN_04135 fliA RNA polymerase sigma factor FliA insig. 48 100
o Escherichia coli ECRC100 OKFHMN_25780 fliA RNA polymerase sigma factor FliA cofit 48 100
o Escherichia coli ECRC101 MCAODC_19610 fliA RNA polymerase sigma factor FliA insig. 48 100
o Escherichia coli ECRC102 NIAGMN_02270 fliA RNA polymerase sigma factor FliA insig. 48 100
o Escherichia coli ECRC62 BNILDI_15190 fliA RNA polymerase sigma factor FliA cofit 48 100
o Escherichia coli ECRC98 JDDGAC_00370 fliA RNA polymerase sigma factor FliA insig. 48 100
o Escherichia coli ECRC99 KEDOAH_02310 fliA RNA polymerase sigma factor FliA no data 48 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01807 RNA polymerase sigma factor FliA insig. 48 100
o Escherichia fergusonii Becca EFB2_02023 RNA polymerase sigma factor FliA insig. 48 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_21960 fliA RNA polymerase sigma factor FliA cofit 47 98
o Erwinia tracheiphila SCR3 LU632_RS13785 RNA polymerase sigma factor FliA insig. 47 98
o Pantoea sp. MT58 IAI47_08160 RNA polymerase sigma factor FliA cofit 47 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02055 RNA polymerase sigma factor FliA cofit 47 98
o Erwinia amylovora T8 OLJFJH_12555 RNA polymerase sigma factor FliA sig. 47 98
o Enterobacter asburiae PDN3 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family cofit 48 100
o Enterobacter sp. TBS_079 MPMX20_02847 RNA polymerase sigma factor FliA strong 48 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1690 RNA polymerase sigma factor for flagellar operon strong 47 100
o Serratia liquefaciens MT49 IAI46_15785 RNA polymerase sigma factor FliA cofit 46 99
o Marinobacter adhaerens HP15 HP15_2302 flagellar biosynthesis sigma factor FliA strong 46 99
o Alteromonas macleodii MIT1002 MIT1002_01103 Sigma-F factor sig. 45 97
o Shewanella amazonensis SB2B Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) strong 47 95
o Shewanella loihica PV-4 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) strong 47 95
o Shewanella oneidensis MR-1 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) strong 48 95
o Pseudomonas aeruginosa MRSN321 DY961_RS05635 fliA;inference=COORDINATES RNA polymerase sigma factor FliA strong 44 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS47155 fliA;inference=COORDINATES RNA polymerase sigma factor FliA strong 44 98
o Pseudomonas sp. S08-1 OH686_02730 RNA polymerase sigma factor for flagellar operon cofit 46 97
o Pseudomonas aeruginosa PA14 IKLFDK_06920 flagellar biosynthesis sigma factor FliA strong 44 98
o Lysobacter sp. OAE881 ABIE51_RS16865 RNA polymerase sigma factor FliA strong 45 98
o Shewanella sp. ANA-3 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) strong 47 95
o Pseudomonas segetis P6 ACVTMO_RS15490 fliA RNA polymerase sigma factor FliA strong 45 97
o Pseudomonas stutzeri RCH2 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family strong 44 97
o Pseudomonas syringae pv. syringae B728a Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG strong 43 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG cofit 43 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS20265 RNA polymerase sigma factor FliA insig. 43 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_10335 RNA polymerase sigma factor FliA cofit 44 98
o Rhodanobacter sp. FW510-T8 OKGIIK_02830 fliA RNA polymerase sigma factor FliA cofit 45 93
o Pseudomonas fluorescens FW300-N2C3 AO356_03730 flagellar biosynthesis sigma factor strong 44 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2573 RNA polymerase sigma factor for flagellar operon strong 44 93
o Rhodanobacter denitrificans MT42 LRK55_RS13320 RNA polymerase sigma factor FliA cofit 44 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13580 RNA polymerase sigma factor FliA strong 44 93
o Pseudomonas simiae WCS417 PS417_19695 flagellar biosynthesis sigma factor strong 44 95
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS14995 RNA polymerase sigma factor FliA insig. 44 94
o Pseudomonas fluorescens SBW25 PFLU_RS21660 RNA polymerase sigma factor FliA cofit 43 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21660 RNA polymerase sigma factor FliA strong 43 98
o Pseudomonas putida KT2440 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons strong 42 98
o Pseudomonas sp. DMC3 GFF2472 RNA polymerase sigma factor FliA cofit 44 93
o Pseudomonas sp. RS175 PFR28_00852 RNA polymerase sigma factor FliA strong 44 93
o Pseudomonas orientalis W4I3 QF045_RS21835 RNA polymerase sigma factor FliA insig. 42 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon insig. 44 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04138 RNA polymerase sigma factor FliA cofit 42 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3626 RNA polymerase sigma factor for flagellar operon insig. 44 93
o Pseudomonas fluorescens FW300-N2E3 AO353_18785 flagellar biosynthesis sigma factor strong 44 93
o Pseudomonas sp. SVBP6 COO64_RS25625 fliA RNA polymerase sigma factor FliA cofit 42 98
o Pseudomonas sp. BP01 JOY50_RS00585 fliA RNA polymerase sigma factor FliA cofit 42 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2832.1 RNA polymerase sigma factor for flagellar operon cofit 47 94
  Erwinia amylovora T8 OLJFJH_10105 RNA polymerase sigma factor FliA insig. 38 100
o Desulfovibrio vulgaris Miyazaki F DvMF_2011 RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) strong 36 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU3229 fliA RNA polymerase sigma factor for flagellar operon FliA (TIGR) strong 34 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4065 RNA polymerase sigma factor for flagellar operon insig. 35 95
o Sphingobium sp. HT1-2 GFF3722 RNA polymerase sigma factor for flagellar operon cofit 33 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2081 RNA polymerase sigma factor, FliA/WhiG family cofit 33 93
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14635 RNA polymerase sigma factor FliA no data 34 91
  Erwinia tracheiphila SCR3 LU632_RS20475 FliA/WhiG family RNA polymerase sigma factor no data 34 91
  Pseudomonas stutzeri RCH2 Psest_4160 RNA polymerase sigma factor, FliA/WhiG family insig. 36 91
  Cellulophaga baltica 18 M666_RS16155 RNA polymerase sigma factor RpoD/SigA insig. 29 83
  Escherichia coli Nissle 1917 ECOLIN_RS10960 sigma-70 family RNA polymerase sigma factor no data 64 24
  Mycobacterium tuberculosis H37Rv Rv3286c Alternative RNA polymerase sigma factor SigF insig. 30 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3437 RNA polymerase sigma factor, sigma-70 family no data 30 82
  Synechococcus elongatus PCC 7942 Synpcc7942_0569 rpoD4 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like strong 31 83
  Cellulophaga baltica 18 M666_RS16995 RNA polymerase sigma factor RpoD/SigA strong 29 82
  Synechococcus elongatus PCC 7942 Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD no data 26 93
  Synechococcus elongatus PCC 7942 Synpcc7942_1557 rpoD6 principal RNA polymerase sigma factor SigA strong 30 83
  Cellulophaga baltica 18 M666_RS08520 sigma-70 family RNA polymerase sigma factor no data 29 82
  Synechocystis sp000284455 PCC 6803 SGL_RS17245 RNA polymerase sigma factor RpoD no data 26 93
  Rhodospirillum rubrum S1H Rru_A2882 Sigma 70 (RpoD) (NCBI) no data 25 81
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13945 RNA polymerase sigma factor RpoD no data 24 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04885 RNA polymerase subunit sigma no data 29 82
  Phocaeicola dorei CL03T12C01 ABI39_RS13985 RNA polymerase sigma factor RpoD/SigA no data 28 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17770 RNA polymerase sigma factor RpoD/SigA no data 28 82
  Bacteroides ovatus ATCC 8483 BACOVA_00615 Sigma-70 region 2 no data 27 82
  Bacteroides stercoris CC31F HMPREF1181_RS10780 RNA polymerase sigma factor RpoD/SigA no data 27 82
  Bacteroides thetaiotaomicron VPI-5482 BT1311 RNA polymerase sigma factor rpoD (Sigma-A) (NCBI ptt file) no data 27 82
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10595 RNA polymerase sigma factor RpoD no data 24 81
  Bosea sp. OAE506 ABIE41_RS11995 RNA polymerase sigma factor RpoD no data 24 81
  Magnetospirillum magneticum AMB-1 AMB_RS03585 RNA polymerase sigma factor RpoD no data 24 81
  Caulobacter crescentus NA1000 CCNA_03142 RNA polymerase sigma factor rpoD no data 24 81
  Caulobacter crescentus NA1000 Δfur CCNA_03142 RNA polymerase sigma factor rpoD no data 24 81
  Xanthobacter sp. DMC5 GFF3244 RNA polymerase sigma factor RpoD no data 24 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1726 RNA polymerase sigma factor, sigma-70 family insig. 26 93
  Azospirillum sp. SherDot2 MPMX19_00761 RNA polymerase sigma factor RpoD no data 24 81
  Azospirillum brasilense Sp245 AZOBR_RS10905 RNA polymerase sigma factor RpoD no data 24 81
  Agrobacterium fabrum C58 Atu2167 RNA polymerase sigma factor RpoD no data 24 81
  Sinorhizobium meliloti 1021 SMc01563 RNA polymerase sigma factor RpoD no data 24 81
  Rhizobium sp. OAE497 ABIE40_RS12720 RNA polymerase sigma factor RpoD no data 24 81
  Rhodopseudomonas palustris CGA009 TX73_006610 RNA polymerase sigma factor RpoD no data 25 81
  Synechocystis sp000284455 PCC 6803 SGL_RS14610 RNA polymerase sigma factor SigC cofit 26 95
  Rhodanobacter denitrificans MT42 LRK55_RS07055 RNA polymerase sigma factor RpoD no data 24 81
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07325 RNA polymerase sigma factor RpoD no data 24 81
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01085 RNA polymerase sigma factor RpoD no data 24 81
  Dinoroseobacter shibae DFL-12 Dshi_2261 RNA polymerase, sigma 70 subunit, RpoD family (RefSeq) no data 24 81
  Phaeobacter inhibens DSM 17395 PGA1_c08800 RNA polymerase sigma factor RpoD no data 24 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16420 RNA polymerase sigma factor RpoD/SigA no data 27 82
  Rhodanobacter sp. FW510-T8 OKGIIK_13865 rpoD RNA polymerase sigma factor RpoD no data 24 81
  Sinorhizobium meliloti 1021 SMc03873 RNA polymerase factor sigma-32 insig. 29 97
  Desulfovibrio vulgaris Miyazaki F DvMF_0494 RNA polymerase, sigma 70 subunit, RpoD subfamily (RefSeq) no data 23 93
  Sphingobium sp. HT1-2 GFF2093 RNA polymerase sigma factor RpoD no data 23 81
  Bifidobacterium breve UCC2003 BBR_RS16480 RNA polymerase sigma factor no data 26 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4238 RNA polymerase sigma factor RpoD, C-terminal domain no data 23 81
  Synechocystis sp000284455 PCC 6803 SGL_RS12540 RNA polymerase sigma factor, RpoD/SigA family strong 25 97
  Shewanella amazonensis SB2B Sama_0276 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein (RefSeq) insig. 23 88
  Desulfovibrio vulgaris Hildenborough JW710 DVU1788 rpoD RNA polymerase sigma-70 factor (TIGR) no data 24 81
  Synechococcus elongatus PCC 7942 Synpcc7942_1510 sigF1 RNA polymerase sigma factor SigF strong 35 46
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16485 RNA polymerase sigma factor RpoD/SigA insig. 27 85
  Acinetobacter baumannii LAC-4 RR41_RS03995 RNA polymerase sigma factor RpoD no data 23 81
  Acinetobacter radioresistens SK82 MPMX26_00713 RNA polymerase sigma factor RpoD no data 23 81
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4729.1 RNA polymerase sigma factor RpoD no data 22 81
  Dechlorosoma suillum PS Dsui_1209 RNA polymerase sigma factor, sigma-70 family no data 24 81
  Marinobacter adhaerens HP15 HP15_315 RNA polymerase, sigma 70 subunit, RpoD no data 23 81
  Rhizobium sp. OAE497 ABIE40_RS18645 RNA polymerase factor sigma-32 insig. 27 89
  Lysobacter sp. OAE881 ABIE51_RS02310 RNA polymerase sigma factor RpoD no data 23 81
  Dickeya dadantii 3937 DDA3937_RS02945 RNA polymerase sigma factor RpoD no data 23 81
  Dickeya dianthicola 67-19 HGI48_RS03110 RNA polymerase sigma factor RpoD no data 23 81
  Dickeya dianthicola ME23 DZA65_RS03105 RNA polymerase sigma factor RpoD no data 23 81
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14330 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Erwinia tracheiphila SCR3 LU632_RS20725 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11870 RNA polymerase sigma factor RpoD no data 23 81
  Pectobacterium carotovorum WPP14 HER17_RS18415 RNA polymerase sigma factor RpoD no data 23 81
  Rahnella sp. WP5 EX31_RS08195 RNA polymerase sigma factor RpoD no data 23 81
  Erwinia amylovora T8 OLJFJH_07585 RNA polymerase sigma factor RpoD no data 23 81
  Serratia liquefaciens MT49 IAI46_22125 RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli BL21 ECD_02937 RNA polymerase, sigma 70 (sigma D) factor no data 23 81
  Escherichia fergusonii Becca EFB2_00744 RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECOR27 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECOR38 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECRC100 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECRC101 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECRC102 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECRC62 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECRC98 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli ECRC99 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00635 RNA polymerase sigma factor RpoD no data 23 81
  Enterobacter sp. TBS_079 MPMX20_03909 RNA polymerase sigma factor RpoD no data 23 81
  Escherichia coli BW25113 b3067 rpoD RNA polymerase sigma factor (NCBI) no data 23 81
  Klebsiella michiganensis M5al BWI76_RS24555 RNA polymerase sigma factor RpoD no data 23 81
  Klebsiella pneumoniae MKP103 KDGMDA_05365 RNA polymerase sigma factor RpoD no data 23 81
  Klebsiella pneumoniae MRSN742743 KFA93_RS12625 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 23 81
  Pantoea sp. MT58 IAI47_03050 RNA polymerase sigma factor RpoD no data 23 81
  Pseudomonas sp. BP01 JOY50_RS18070 rpoD RNA polymerase sigma factor RpoD no data 22 81
  Synechocystis sp000284455 PCC 6803 SGL_RS07975 RNA polymerase sigma factor, RpoD/SigA family strong 28 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA no data 26 82
  Enterobacter asburiae PDN3 EX28DRAFT_3102 RNA polymerase, sigma 70 subunit, RpoD no data 23 81
  Pseudomonas fluorescens SBW25 PFLU_RS27535 RNA polymerase sigma factor RpoD no data 22 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27535 RNA polymerase sigma factor RpoD no data 22 81
  Pseudomonas sp. SVBP6 COO64_RS22580 rpoD RNA polymerase sigma factor RpoD no data 22 81
  Pseudomonas putida KT2440 PP_0387 RNA polymerase, sigma 70 (sigma D) factor no data 22 81
  Pseudomonas simiae WCS417 PS417_25880 RNA polymerase subunit sigma-70 no data 22 81
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05296 RNA polymerase sigma factor RpoD no data 22 81
  Pseudomonas orientalis W4I3 QF045_RS00280 RNA polymerase sigma factor RpoD no data 22 81
  Shewanella amazonensis SB2B Sama_0823 RNA polymerase sigma-70 factor (RefSeq) no data 23 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_02745 RNA polymerase sigma factor RpoD no data 23 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3822 RNA polymerase sigma factor RpoD no data 22 81
  Pseudomonas stutzeri RCH2 Psest_3682 RNA polymerase sigma factor, sigma-70 family no data 22 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS13555 RNA polymerase sigma factor RpoD no data 23 81
  Pseudomonas aeruginosa MRSN321 DY961_RS22905 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 21 81
  Pseudomonas aeruginosa PA14 IKLFDK_22530 RNA polymerase sigma factor RpoD no data 21 81
  Pseudomonas aeruginosa PUPa3 DQ20_RS36440 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 21 81
  Shewanella sp. ANA-3 Shewana3_3087 RNA polymerase, sigma 70 subunit, RpoD (RefSeq) no data 23 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3177 RNA polymerase sigma factor RpoD no data 23 81
  Shewanella oneidensis MR-1 SO1284 rpoD RNA polymerase sigma-70 factor (NCBI ptt file) no data 23 81
  Variovorax sp. OAS795 ABID97_RS10535 RNA polymerase sigma factor RpoD no data 22 81
  Variovorax sp. SCN45 GFF2879 RNA polymerase sigma factor RpoD no data 22 81
  Shewanella loihica PV-4 Shew_0996 RpoD family RNA polymerase sigma factor (RefSeq) no data 24 81
  Cupriavidus basilensis FW507-4G11 RR42_RS10750 DNA-directed RNA polymerase sigma-70 factor no data 21 81
  Mycobacterium tuberculosis H37Rv Rv2703 RNA polymerase sigma factor SigA (sigma-A) no data 28 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04285 RNA polymerase sigma factor RpoD no data 26 82
  Kangiella aquimarina DSM 16071 B158DRAFT_0818 RNA polymerase sigma factor, sigma-70 family no data 22 81
  Pseudomonas sp. S08-1 OH686_14970 RNA polymerase sigma factor RpoD no data 21 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2513 RNA polymerase sigma factor RpoD no data 21 81
  Synechococcus elongatus PCC 7942 Synpcc7942_1784 sigF2 RNA polymerase sigma factor SigF strong 33 46
  Pseudomonas segetis P6 ACVTMO_RS04280 rpoD RNA polymerase sigma factor RpoD no data 21 81
  Pseudomonas sp. DMC3 GFF51 RNA polymerase sigma factor RpoD no data 21 81
  Pseudomonas sp. RS175 PFR28_04078 RNA polymerase sigma factor RpoD no data 21 81
  Pseudomonas syringae pv. syringae B728a Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 21 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 21 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1186 RNA polymerase sigma factor RpoD no data 21 81
  Pseudomonas fluorescens FW300-N2E3 AO353_07385 RNA polymerase subunit sigma-70 no data 21 81
  Pseudomonas fluorescens FW300-N2C3 AO356_14265 RNA polymerase subunit sigma-70 no data 21 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4791 RNA polymerase sigma factor RpoD no data 21 81
  Phaeobacter inhibens DSM 17395 PGA1_c26660 RNA polymerase sigma-32 factor RpoH insig. 24 90
  Methylophilus sp. DMC18 GFF2349 RNA polymerase sigma factor RpoD no data 22 81
  Acidovorax sp. GW101-3H11 Ac3H11_194 RNA polymerase sigma factor RpoD no data 21 81
  Synechococcus elongatus PCC 7942 Synpcc7942_1849 sigC RNA polymerase sigma factor SigC strong 25 95
  Alteromonas macleodii MIT1002 MIT1002_00733 Sigma-70 no data 23 81
  Cupriavidus basilensis FW507-4G11 RR42_RS14965 hypothetical protein strong 22 81
  Castellaniella sp019104865 MT123 ABCV34_RS02695 RNA polymerase sigma factor RpoD no data 22 81
  Synechococcus elongatus PCC 7942 Synpcc7942_1746 rpoD2 group2 RNA polymerase sigma factor SigB strong 24 95
  Variovorax sp. SCN45 GFF6984 RNA polymerase sigma factor for flagellar operon insig. 27 83
  Burkholderia phytofirmans PsJN BPHYT_RS33535 RNA polymerase sigma factor RpoD strong 22 81
  Paraburkholderia graminis OAS925 ABIE53_004866 RNA polymerase primary sigma factor strong 22 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06008 RNA polymerase, sigma 70 subunit, RpoD strong 22 81
  Ralstonia solanacearum PSI07 RPSI07_RS13555 RNA polymerase sigma factor RpoD no data 22 81
  Azospirillum brasilense Sp245 AZOBR_RS00930 RNA polymerase sigma 70 insig. 29 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS15185 RNA polymerase sigma factor RpoD strong 22 81
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03675 RNA polymerase sigma factor RpoD no data 22 81
  Ralstonia solanacearum GMI1000 RS_RS11120 RNA polymerase sigma factor RpoD no data 22 81
  Ralstonia solanacearum UW163 UW163_RS09995 RNA polymerase sigma factor RpoD no data 22 81
  Alteromonas macleodii MIT1002 MIT1002_00625 RNA polymerase sigma factor RpoS strong 25 82
  Pseudomonas stutzeri RCH2 Psest_2806 RNA polymerase sigma factor RpoS strong 25 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS15600 RNA polymerase sigma factor RpoD no data 22 81
  Ralstonia solanacearum PSI07 RPSI07_RS07910 RNA polymerase sigma factor insig. 27 95
  Pseudomonas aeruginosa MRSN321 DY961_RS14865 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 25 83
  Pseudomonas aeruginosa PA14 IKLFDK_18495 RNA polymerase sigma factor RpoS strong 25 83
  Pseudomonas aeruginosa PUPa3 DQ20_RS42260 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 25 83
  Shewanella amazonensis SB2B Sama_1044 RNA polymerase sigma-38 factor (RefSeq) sig. 25 81
  Herbaspirillum seropedicae SmR1 HSERO_RS04365 RNA polymerase sigma factor RpoD no data 22 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_02835 RNA polymerase sigma factor RpoS cofit 26 82
  Azospirillum sp. SherDot2 MPMX19_02324 RNA polymerase sigma factor RpoH insig. 28 83
  Synechocystis sp000284455 PCC 6803 SGL_RS07740 RNA polymerase sigma factor, RpoD/SigA family strong 26 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03902 RNA polymerase, sigma 70 subunit, RpoD strong 24 81
  Paraburkholderia graminis OAS925 ABIE53_004960 RNA polymerase primary sigma factor strong 24 81
  Fusobacterium nucleatum SB010 HUW76_03650 RNA polymerase sigma factor RpoD no data 24 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2597 RNA polymerase sigma factor, sigma-70 family insig. 25 87
  Burkholderia phytofirmans PsJN BPHYT_RS32590 RNA polymerase sigma factor RpoD no data 24 81
  Pseudomonas sp. S08-1 OH686_18185 RNA polymerase sigma factor RpoS cofit 24 83
  Shewanella loihica PV-4 Shew_3603 RNA polymerase factor sigma-32 (RefSeq) no data 25 83