Homologs of GFF54 from Sphingobium sp. HT1-2

Peptidyl-tRNA hydrolase (EC 3.1.1.29)
SEED: Peptidyl-tRNA hydrolase (EC 3.1.1.29)
KEGG: peptidyl-tRNA hydrolase, PTH1 family

123 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF54 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3231 peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 75 99
o Bosea sp. OAE506 ABIE41_RS11320 aminoacyl-tRNA hydrolase no data 62 98
o Dinoroseobacter shibae DFL-12 Dshi_0947 Aminoacyl-tRNA hydrolase (RefSeq) no data 60 99
  Phaeobacter inhibens DSM 17395 PGA1_c04900 peptidyl-tRNA hydrolase Pth insig. 61 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09010 aminoacyl-tRNA hydrolase no data 53 99
o Xanthobacter sp. DMC5 GFF1677 Peptidyl-tRNA hydrolase no data 55 99
  Agrobacterium fabrum C58 Atu2230 peptidyl tRNA hydrolase no data 55 98
o Rhodopseudomonas palustris CGA009 TX73_022575 aminoacyl-tRNA hydrolase no data 52 99
o Azospirillum sp. SherDot2 MPMX19_01640 Peptidyl-tRNA hydrolase no data 52 98
  Sinorhizobium meliloti 1021 SMc02693 peptidyl-tRNA hydrolase insig. 54 98
  Rhizobium sp. OAE497 ABIE40_RS13080 aminoacyl-tRNA hydrolase no data 52 98
o Azospirillum brasilense Sp245 AZOBR_RS31195 peptidyl-tRNA hydrolase no data 53 99
  Rhodospirillum rubrum S1H Rru_A3747 Aminoacyl-tRNA hydrolase (NCBI) no data 54 97
o Caulobacter crescentus NA1000 CCNA_00517 peptidyl-tRNA hydrolase insig. 53 99
o Caulobacter crescentus NA1000 Δfur CCNA_00517 peptidyl-tRNA hydrolase no data 53 99
  Magnetospirillum magneticum AMB-1 AMB_RS21990 peptidyl-tRNA hydrolase no data 52 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF819 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 45 85
  Variovorax sp. OAS795 ABID97_RS23760 aminoacyl-tRNA hydrolase no data 42 85
  Variovorax sp. SCN45 GFF2347 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 42 85
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS22015 aminoacyl-tRNA hydrolase no data 47 84
o Castellaniella sp019104865 MT123 ABCV34_RS09230 aminoacyl-tRNA hydrolase no data 45 85
o Fusobacterium nucleatum SB010 HUW76_09740 aminoacyl-tRNA hydrolase no data 39 95
o Rhodanobacter sp. FW510-T8 OKGIIK_10570 pth aminoacyl-tRNA hydrolase no data 46 84
o Rhodanobacter denitrificans MT42 LRK55_RS03430 aminoacyl-tRNA hydrolase no data 46 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03680 aminoacyl-tRNA hydrolase no data 46 86
o Acidovorax sp. GW101-3H11 Ac3H11_3450 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 40 85
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06255 aminoacyl-tRNA hydrolase no data 45 86
o Acinetobacter radioresistens SK82 MPMX26_00722 Peptidyl-tRNA hydrolase no data 41 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4169.1 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 43 99
o Herbaspirillum seropedicae SmR1 HSERO_RS20950 peptidyl-tRNA hydrolase no data 41 85
o Lysobacter sp. OAE881 ABIE51_RS05740 aminoacyl-tRNA hydrolase no data 44 87
  Synechocystis sp000284455 PCC 6803 SGL_RS14900 aminoacyl-tRNA hydrolase no data 43 81
o Acinetobacter baumannii LAC-4 RR41_RS15130 aminoacyl-tRNA hydrolase no data 39 97
o Synechococcus elongatus PCC 7942 Synpcc7942_0227 pth peptidyl-tRNA hydrolase no data 41 84
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17300 aminoacyl-tRNA hydrolase no data 40 97
o Klebsiella pneumoniae MKP103 KDGMDA_24700 aminoacyl-tRNA hydrolase no data 41 97
o Pantoea sp. MT58 IAI47_11305 aminoacyl-tRNA hydrolase no data 41 97
o Alteromonas macleodii MIT1002 MIT1002_01505 Peptidyl-tRNA hydrolase no data 39 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_10870 peptidyl-tRNA hydrolase no data 45 83
o Klebsiella pneumoniae MRSN742743 KFA93_RS16070 pth;go_function=aminoacyl-tRNA aminoacyl-tRNA hydrolase no data 43 90
o Desulfovibrio vulgaris Hildenborough JW710 DVU1573 pth peptidyl-tRNA hydrolase (TIGR) no data 41 84
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_25720 pth aminoacyl-tRNA hydrolase no data 40 97
o Erwinia amylovora T8 OLJFJH_14935 aminoacyl-tRNA hydrolase no data 40 97
o Erwinia tracheiphila SCR3 LU632_RS10700 pth aminoacyl-tRNA hydrolase no data 40 97
o Methylophilus sp. DMC18 GFF1906 Peptidyl-tRNA hydrolase no data 43 97
o Desulfovibrio vulgaris Miyazaki F DvMF_0489 peptidyl-tRNA hydrolase (RefSeq) no data 41 84
o Klebsiella michiganensis M5al BWI76_RS17480 aminoacyl-tRNA hydrolase no data 45 81
o Pectobacterium carotovorum WPP14 HER17_RS10450 aminoacyl-tRNA hydrolase no data 42 97
o Escherichia coli BL21 ECD_01179 peptidyl-tRNA hydrolase no data 45 81
o Escherichia fergusonii Becca EFB2_02723 Peptidyl-tRNA hydrolase no data 45 81
o Escherichia coli ECOR27 NOLOHH_20645 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli ECOR38 HEPCGN_24880 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli ECRC100 OKFHMN_28415 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli ECRC101 MCAODC_21845 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli ECRC102 NIAGMN_27820 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli ECRC62 BNILDI_18800 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli ECRC98 JDDGAC_06160 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli ECRC99 KEDOAH_25410 pth aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02483 Peptidyl-tRNA hydrolase no data 45 81
o Escherichia coli Nissle 1917 ECOLIN_RS07285 aminoacyl-tRNA hydrolase no data 45 81
o Escherichia coli BW25113 b1204 pth peptidyl-tRNA hydrolase (NCBI) no data 45 81
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2783 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 46 81
o Enterobacter sp. TBS_079 MPMX20_02644 Peptidyl-tRNA hydrolase no data 41 90
o Pseudomonas sp. BP01 JOY50_RS24900 pth aminoacyl-tRNA hydrolase no data 42 97
o Shewanella sp. ANA-3 Shewana3_1011 peptidyl-tRNA hydrolase (RefSeq) no data 39 97
o Enterobacter asburiae PDN3 EX28DRAFT_0822 aminoacyl-tRNA hydrolase no data 45 81
o Cupriavidus basilensis FW507-4G11 RR42_RS02005 peptidyl-tRNA hydrolase no data 39 97
o Kangiella aquimarina DSM 16071 B158DRAFT_2053 peptidyl-tRNA hydrolase no data 47 83
o Pseudomonas putida KT2440 PP_0720 Peptidyl-tRNA hydrolase no data 41 97
o Shewanella amazonensis SB2B Sama_2572 peptidyl-tRNA hydrolase (RefSeq) no data 37 97
o Rahnella sp. WP5 EX31_RS07345 aminoacyl-tRNA hydrolase no data 42 89
o Dickeya dianthicola 67-19 HGI48_RS10970 aminoacyl-tRNA hydrolase no data 40 97
o Dickeya dianthicola ME23 DZA65_RS11430 aminoacyl-tRNA hydrolase no data 40 97
o Pseudomonas segetis P6 ACVTMO_RS06575 pth aminoacyl-tRNA hydrolase no data 42 91
o Pseudomonas syringae pv. syringae B728a Psyr_0942 peptidyl-tRNA hydrolase no data 44 83
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0942 peptidyl-tRNA hydrolase no data 44 83
o Dickeya dadantii 3937 DDA3937_RS11030 aminoacyl-tRNA hydrolase no data 40 97
o Shewanella oneidensis MR-1 SO1184 pth peptidyl-tRNA hydrolase (NCBI ptt file) no data 38 97
o Serratia liquefaciens MT49 IAI46_10250 aminoacyl-tRNA hydrolase no data 40 90
  Mycobacterium tuberculosis H37Rv Rv1014c Probable peptidyl-tRNA hydrolase Pth no data 44 80
o Pseudomonas aeruginosa MRSN321 DY961_RS29195 pth;go_function=aminoacyl-tRNA aminoacyl-tRNA hydrolase no data 41 91
o Pseudomonas aeruginosa PA14 IKLFDK_00130 aminoacyl-tRNA hydrolase no data 41 91
o Pseudomonas aeruginosa PUPa3 DQ20_RS55500 pth;go_function=aminoacyl-tRNA aminoacyl-tRNA hydrolase no data 41 91
o Pseudomonas stutzeri RCH2 Psest_1104 peptidyl-tRNA hydrolase no data 44 83
o Bifidobacterium breve UCC2003 BBR_RS14110 aminoacyl-tRNA hydrolase no data 38 87
o Pseudomonas sp. S08-1 OH686_07960 aminoacyl-tRNA hydrolase no data 44 83
o Marinobacter adhaerens HP15 HP15_705 peptidyl-tRNA hydrolase no data 45 84
o Paraburkholderia graminis OAS925 ABIE53_000705 PTH1 family peptidyl-tRNA hydrolase no data 40 83
o Shewanella loihica PV-4 Shew_2920 peptidyl-tRNA hydrolase (RefSeq) no data 36 97
o Pseudomonas sp. SVBP6 COO64_RS03190 pth aminoacyl-tRNA hydrolase no data 41 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS06980 aminoacyl-tRNA hydrolase no data 40 95
  Ralstonia solanacearum GMI1000 RS_RS01940 peptidyl-tRNA hydrolase no data 46 71
  Dechlorosoma suillum PS Dsui_1038 peptidyl-tRNA hydrolase no data 48 75
  Ralstonia solanacearum PSI07 RPSI07_RS22210 aminoacyl-tRNA hydrolase no data 47 71
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5214 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 40 91
o Burkholderia phytofirmans PsJN BPHYT_RS02835 peptidyl-tRNA hydrolase no data 38 83
o Pseudomonas sp. RS175 PFR28_03663 Peptidyl-tRNA hydrolase no data 40 91
o Pseudomonas fluorescens FW300-N2C3 AO356_16455 peptidyl-tRNA hydrolase no data 40 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01941 peptidyl-tRNA hydrolase no data 38 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11090 aminoacyl-tRNA hydrolase no data 47 71
  Ralstonia solanacearum UW163 UW163_RS02490 aminoacyl-tRNA hydrolase no data 47 71
o Pseudomonas sp. DMC3 GFF4498 Peptidyl-tRNA hydrolase no data 39 91
o Pseudomonas fluorescens FW300-N2E3 AO353_14745 peptidyl-tRNA hydrolase no data 39 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2913 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 39 91
o Paraburkholderia sabiae LMG 24235 QEN71_RS01685 aminoacyl-tRNA hydrolase no data 38 89
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00580 aminoacyl-tRNA hydrolase no data 35 84
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1575 Peptidyl-tRNA hydrolase (EC 3.1.1.29) no data 39 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16350 aminoacyl-tRNA hydrolase no data 37 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4599 peptidyl-tRNA hydrolase no data 35 80
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00919 Peptidyl-tRNA hydrolase no data 41 83
  Pseudomonas orientalis W4I3 QF045_RS06545 aminoacyl-tRNA hydrolase no data 40 83
  Pseudomonas fluorescens SBW25 PFLU_RS03615 aminoacyl-tRNA hydrolase no data 40 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03615 aminoacyl-tRNA hydrolase no data 40 83
  Pseudomonas simiae WCS417 PS417_03565 peptidyl-tRNA hydrolase no data 40 83
  Cellulophaga baltica 18 M666_RS06885 aminoacyl-tRNA hydrolase no data 34 83
  Bacteroides ovatus ATCC 8483 BACOVA_05383 aminoacyl-tRNA hydrolase no data 35 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24745 aminoacyl-tRNA hydrolase no data 35 84
  Bacteroides thetaiotaomicron VPI-5482 BT4588 peptidyl-tRNA hydrolase (NCBI ptt file) no data 34 86
  Bacteroides stercoris CC31F HMPREF1181_RS12000 aminoacyl-tRNA hydrolase no data 33 86
  Phocaeicola dorei CL03T12C01 ABI39_RS18930 aminoacyl-tRNA hydrolase no data 32 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04705 aminoacyl-tRNA hydrolase no data 31 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15665 aminoacyl-tRNA hydrolase no data 32 84