Homologs of GFF4940 from Variovorax sp. SCN45

FIG033889: YebC paralog in Betaproteobacteria
SEED: FIG033889: YebC paralog in Betaproteobacteria

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4940 FIG033889: YebC paralog in Betaproteobacteria insig. 100 100
o Variovorax sp. OAS795 ABID97_RS04355 YebC/PmpR family DNA-binding transcriptional regulator insig. 93 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5458 FIG033889: YebC paralog in Betaproteobacteria insig. 84 100
o Acidovorax sp. GW101-3H11 Ac3H11_2444 FIG000859: hypothetical protein insig. 78 100
o Pseudomonas stutzeri RCH2 Psest_2795 Uncharacterized conserved protein no data 76 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2577 FIG033889: YebC paralog in Betaproteobacteria insig. 72 100
o Pseudomonas sp. DMC3 GFF1461 putative transcriptional regulatory protein insig. 72 100
o Pseudomonas sp. RS175 PFR28_01240 putative transcriptional regulatory protein insig. 70 100
o Pseudomonas fluorescens FW300-N2C3 AO356_01680 transcriptional regulator sig. 70 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2205 FIG033889: YebC paralog in Betaproteobacteria insig. 70 100
o Pseudomonas fluorescens FW300-N2E3 AO353_20255 transcriptional regulator insig. 70 100
o Pseudomonas segetis P6 ACVTMO_RS16025 YebC/PmpR family DNA-binding transcriptional regulator no data 72 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3965 FIG033889: YebC paralog in Betaproteobacteria insig. 70 100
o Pseudomonas orientalis W4I3 QF045_RS18795 YebC/PmpR family DNA-binding transcriptional regulator no data 70 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03726 putative transcriptional regulatory protein cofit 69 100
o Pseudomonas fluorescens SBW25 PFLU_RS19065 YebC/PmpR family DNA-binding transcriptional regulator sig. 69 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19065 YebC/PmpR family DNA-binding transcriptional regulator sig. 69 100
o Pseudomonas sp. SVBP6 COO64_RS07575 YebC/PmpR family DNA-binding transcriptional regulator insig. 68 100
o Pseudomonas simiae WCS417 PS417_17125 transcriptional regulator sig. 69 100
o Pseudomonas syringae pv. syringae B728a Psyr_3028 Protein of unknown function DUF28 insig. 72 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3028 Protein of unknown function DUF28 no data 72 100
o Pseudomonas sp. S08-1 OH686_20180 YebC paralog in Betaproteobacteria insig. 70 100
o Pseudomonas putida KT2440 PP_2550 putative transcriptional regulatory protein insig. 69 99
o Pseudomonas sp. BP01 JOY50_RS10230 YebC/PmpR family DNA-binding transcriptional regulator insig. 69 99
  Rhizobium sp. OAE497 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator insig. 44 91
  Sinorhizobium meliloti 1021 SMc03969 hypothetical protein strong 44 91
  Dechlorosoma suillum PS Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family strong 41 97
  Agrobacterium fabrum C58 Atu3727 hypothetical protein strong 43 91
  Bifidobacterium breve UCC2003 BBR_RS15645 YebC/PmpR family DNA-binding transcriptional regulator no data 44 97
  Phaeobacter inhibens DSM 17395 PGA1_c21770 DNA-binding regulatory protein, YebC/PmpR family no data 42 91
  Cupriavidus basilensis FW507-4G11 RR42_RS04735 hypothetical protein strong 39 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator no data 38 92
  Ralstonia solanacearum UW163 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator no data 38 92
  Ralstonia solanacearum PSI07 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator no data 38 92
  Shewanella sp. ANA-3 Shewana3_1954 hypothetical protein (RefSeq) insig. 38 97
  Ralstonia solanacearum GMI1000 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator sig. 37 92
  Pseudomonas sp. DMC3 GFF5187 Transcriptional regulatory protein PmpR insig. 40 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator sig. 39 92
  Shewanella oneidensis MR-1 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) strong 38 97
  Pseudomonas sp. RS175 PFR28_03415 Transcriptional regulatory protein PmpR strong 40 97
  Klebsiella pneumoniae MKP103 KDGMDA_25425 putative transcriptional regulatory protein KPK_1906 sig. 39 97
  Klebsiella pneumoniae MRSN742743 KFA93_RS07640 YebC/PmpR family DNA-binding transcriptional regulator sig. 39 97
  Pseudomonas fluorescens FW300-N2C3 AO356_18010 hypothetical protein strong 40 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5534 FIG000859: hypothetical protein YebC strong 40 97
  Fusobacterium nucleatum SB010 HUW76_01460 YebC/PmpR family DNA-binding transcriptional regulator strong 39 97
  Enterobacter asburiae PDN3 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family insig. 39 97
  Paraburkholderia graminis OAS925 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein sig. 39 93
  Pseudomonas aeruginosa MRSN321 DY961_RS07610 YebC/PmpR family DNA-binding transcriptional regulator strong 39 97
  Pseudomonas aeruginosa PA14 IKLFDK_04360 YebC/PmpR family DNA-binding transcriptional regulator strong 39 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS45180 YebC/PmpR family DNA-binding transcriptional regulator no data 39 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family no data 39 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) strong 40 91
  Pseudomonas sp. S08-1 OH686_19120 Probable transcriptional regulatory protein YebC sig. 40 97
  Herbaspirillum seropedicae SmR1 HSERO_RS17750 transcriptional regulator no data 38 92
  Dinoroseobacter shibae DFL-12 Dshi_2762 protein of unknown function DUF28 (RefSeq) strong 43 91
  Burkholderia phytofirmans PsJN BPHYT_RS06410 transcriptional regulator sig. 39 93
  Klebsiella michiganensis M5al BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator no data 38 97
  Pectobacterium carotovorum WPP14 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator insig. 39 97
  Serratia liquefaciens MT49 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator cofit 37 97
  Pseudomonas stutzeri RCH2 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family no data 40 97
  Enterobacter sp. TBS_079 MPMX20_02769 putative transcriptional regulatory protein YebC sig. 38 97
  Dickeya dadantii 3937 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator insig. 38 97
  Shewanella amazonensis SB2B Sama_1842 hypothetical protein (RefSeq) insig. 37 97
  Bosea sp. OAE506 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator strong 43 91
  Azospirillum brasilense Sp245 AZOBR_RS09035 transcriptional regulator insig. 42 94
  Methylophilus sp. DMC18 GFF2324 Transcriptional regulatory protein PmpR cofit 37 97
  Kangiella aquimarina DSM 16071 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family strong 37 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02315 YebC/PmpR family DNA-binding transcriptional regulator cofit 37 97
  Mycobacterium tuberculosis H37Rv Rv2603c Highly conserved protein no data 36 98
  Escherichia coli BW25113 b1864 yebC hypothetical protein (NCBI) sig. 37 97
  Pseudomonas segetis P6 ACVTMO_RS08345 YebC/PmpR family DNA-binding transcriptional regulator insig. 40 97
  Escherichia coli BL21 ECD_01835 UPF0082 family protein insig. 37 97
  Escherichia fergusonii Becca EFB2_02078 putative transcriptional regulatory protein YebC insig. 37 97
  Escherichia coli ECOR27 NOLOHH_16700 putative transcriptional regulatory protein YebC insig. 37 97
  Escherichia coli ECOR38 HEPCGN_04665 putative transcriptional regulatory protein YebC insig. 37 97
  Escherichia coli ECRC100 OKFHMN_26255 putative transcriptional regulatory protein YebC cofit 37 97
  Escherichia coli ECRC101 MCAODC_19150 putative transcriptional regulatory protein YebC insig. 37 97
  Escherichia coli ECRC102 NIAGMN_01805 putative transcriptional regulatory protein YebC no data 37 97
  Escherichia coli ECRC62 BNILDI_15490 putative transcriptional regulatory protein YebC insig. 37 97
  Escherichia coli ECRC98 JDDGAC_00830 putative transcriptional regulatory protein YebC insig. 37 97
  Escherichia coli ECRC99 KEDOAH_01850 putative transcriptional regulatory protein YebC no data 37 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01864 putative transcriptional regulatory protein YebC insig. 37 97
  Escherichia coli Nissle 1917 ECOLIN_RS10380 YebC/PmpR family DNA-binding transcriptional regulator insig. 37 97
  Lysobacter sp. OAE881 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator insig. 39 91
  Rhodopseudomonas palustris CGA009 TX73_005640 YebC/PmpR family DNA-binding transcriptional regulator sig. 42 92
  Rhodanobacter sp. FW510-T8 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator insig. 39 91
  Dickeya dianthicola 67-19 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator insig. 37 97
  Dickeya dianthicola ME23 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator insig. 37 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1645 FIG000859: hypothetical protein YebC insig. 37 97
  Rahnella sp. WP5 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator insig. 37 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator no data 36 91
  Xanthobacter sp. DMC5 GFF83 putative transcriptional regulatory protein no data 42 91
  Pantoea sp. MT58 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator strong 36 97
  Rhodanobacter denitrificans MT42 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator strong 38 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator strong 38 91
  Azospirillum sp. SherDot2 MPMX19_00695 putative transcriptional regulatory protein insig. 40 94
  Acinetobacter baumannii LAC-4 RR41_RS11700 YebC/PmpR family DNA-binding transcriptional regulator no data 36 98
  Desulfovibrio vulgaris Miyazaki F DvMF_3201 hypothetical protein (RefSeq) strong 40 97
  Shewanella loihica PV-4 Shew_2078 hypothetical protein (RefSeq) no data 36 97
  Rhodospirillum rubrum S1H Rru_A1086 hypothetical protein (RefSeq) strong 43 91