Homologs of GFF4152 from Sphingobium sp. HT1-2

Pyridoxal phosphate-containing protein YggS
SEED: Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF4152 Pyridoxal phosphate-containing protein YggS cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2216 pyridoxal phosphate enzyme, YggS family insig. 64 89
o Azospirillum brasilense Sp245 AZOBR_RS01870 alanine racemase no data 54 95
o Agrobacterium fabrum C58 Atu2747 hypothetical protein strong 56 89
o Xanthobacter sp. DMC5 GFF1427 Pyridoxal phosphate homeostasis protein insig. 54 89
o Azospirillum sp. SherDot2 MPMX19_00050 Pyridoxal phosphate homeostasis protein cofit 56 88
o Sinorhizobium meliloti 1021 SMc02812 hypothetical protein sig. 54 89
o Rhizobium sp. OAE497 ABIE40_RS19180 YggS family pyridoxal phosphate-dependent enzyme no data 53 89
o Bosea sp. OAE506 ABIE41_RS04720 YggS family pyridoxal phosphate-dependent enzyme cofit 53 87
o Dinoroseobacter shibae DFL-12 Dshi_0042 alanine racemase domain protein (RefSeq) strong 54 84
o Rhodopseudomonas palustris CGA009 TX73_001485 YggS family pyridoxal phosphate-dependent enzyme strong 53 84
  Magnetospirillum magneticum AMB-1 AMB_RS00120 YggS family pyridoxal phosphate-dependent enzyme cofit 56 78
  Phaeobacter inhibens DSM 17395 PGA1_c33360 putative alanine racemase strong 54 78
o Rhodospirillum rubrum S1H Rru_A3634 Protein of unknown function UPF0001 (NCBI) insig. 49 87
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13760 YggS family pyridoxal phosphate-dependent enzyme insig. 52 87
o Ralstonia solanacearum PSI07 RPSI07_RS02580 YggS family pyridoxal phosphate-dependent enzyme insig. 47 88
o Caulobacter crescentus NA1000 CCNA_03861 pyridoxal 5'-phosphate dependent enzyme class III strong 50 80
o Caulobacter crescentus NA1000 Δfur CCNA_03861 pyridoxal 5'-phosphate dependent enzyme class III cofit 50 80
o Ralstonia solanacearum GMI1000 RS_RS20395 YggS family pyridoxal phosphate-dependent enzyme insig. 48 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS20285 YggS family pyridoxal phosphate-dependent enzyme sig. 45 88
o Ralstonia solanacearum UW163 UW163_RS18890 YggS family pyridoxal phosphate-dependent enzyme insig. 45 88
  Dickeya dianthicola ME23 DZA65_RS03335 YggS family pyridoxal phosphate-dependent enzyme insig. 43 78
o Enterobacter asburiae PDN3 EX28DRAFT_2989 pyridoxal phosphate enzyme, YggS family cofit 42 88
o Escherichia fergusonii Becca EFB2_00951 Pyridoxal phosphate homeostasis protein insig. 41 88
o Escherichia coli BL21 ECD_02781 UPF0001 family protein, PLP-binding insig. 41 88
o Escherichia coli ECOR27 NOLOHH_11125 yggS pyridoxal phosphate homeostasis protein sig. 41 88
o Escherichia coli ECOR38 HEPCGN_18560 yggS pyridoxal phosphate homeostasis protein strong 41 88
o Escherichia coli ECRC100 OKFHMN_19255 yggS pyridoxal phosphate homeostasis protein strong 41 88
o Escherichia coli ECRC101 MCAODC_09775 yggS pyridoxal phosphate homeostasis protein strong 41 88
o Escherichia coli ECRC102 NIAGMN_17020 yggS pyridoxal phosphate homeostasis protein strong 41 88
o Escherichia coli ECRC62 BNILDI_09705 yggS pyridoxal phosphate homeostasis protein insig. 41 88
o Escherichia coli ECRC98 JDDGAC_22885 yggS pyridoxal phosphate homeostasis protein strong 41 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00765 Pyridoxal phosphate homeostasis protein sig. 41 88
o Escherichia coli Nissle 1917 ECOLIN_RS16415 pyridoxal phosphate homeostasis protein sig. 41 88
o Escherichia coli BW25113 b2951 yggS predicted enzyme (NCBI) strong 41 88
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3054 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 39 88
o Escherichia coli ECRC99 KEDOAH_08885 yggS pyridoxal phosphate homeostasis protein no data 41 88
o Acinetobacter baumannii LAC-4 RR41_RS14795 YggS family pyridoxal phosphate-dependent enzyme insig. 40 84
o Enterobacter sp. TBS_079 MPMX20_03809 Pyridoxal phosphate homeostasis protein sig. 40 88
o Shewanella loihica PV-4 Shew_1137 alanine racemase domain-containing protein (RefSeq) insig. 38 88
o Klebsiella pneumoniae MKP103 KDGMDA_04615 YggS family pyridoxal phosphate enzyme insig. 41 88
o Desulfovibrio vulgaris Hildenborough JW710 DVU0051 conserved hypothetical protein TIGR00044 (TIGR) sig. 42 89
o Klebsiella michiganensis M5al BWI76_RS24100 YggS family pyridoxal phosphate enzyme strong 39 88
o Kangiella aquimarina DSM 16071 B158DRAFT_0196 pyridoxal phosphate enzyme, YggS family insig. 38 88
o Dechlorosoma suillum PS Dsui_0603 pyridoxal phosphate enzyme, YggS family strong 42 88
  Marinobacter adhaerens HP15 HP15_288 alanine racemase domain protein insig. 41 78
o Pseudomonas segetis P6 ACVTMO_RS03020 YggS family pyridoxal phosphate-dependent enzyme sig. 40 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04680 hypothetical protein sig. 40 90
o Pseudomonas syringae pv. syringae B728a Psyr_0477 Protein of unknown function UPF0001 sig. 41 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0477 Protein of unknown function UPF0001 insig. 41 88
  Lysobacter sp. OAE881 ABIE51_RS16060 YggS family pyridoxal phosphate-dependent enzyme insig. 45 78
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07085 YggS family pyridoxal phosphate-dependent enzyme insig. 36 94
o Desulfovibrio vulgaris Miyazaki F DvMF_2208 alanine racemase domain protein (RefSeq) sig. 41 89
o Shewanella amazonensis SB2B Sama_2477 hypothetical protein (RefSeq) strong 41 88
o Pseudomonas sp. S08-1 OH686_10975 Pyridoxal phosphate-containing protein YggS cofit 38 88
o Alteromonas macleodii MIT1002 MIT1002_03061 pyridoxal phosphate enzyme, YggS family insig. 36 88
o Pseudomonas sp. DMC3 GFF209 Pyridoxal phosphate homeostasis protein cofit 41 84
o Paraburkholderia sabiae LMG 24235 QEN71_RS26595 YggS family pyridoxal phosphate-dependent enzyme sig. 41 90
o Shewanella sp. ANA-3 Shewana3_1194 hypothetical protein (RefSeq) cofit 38 88
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05482 Pyridoxal phosphate homeostasis protein cofit 39 87
o Pseudomonas fluorescens FW300-N2C3 AO356_13425 hypothetical protein strong 39 88
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09305 YggS family pyridoxal phosphate-dependent enzyme no data 38 92
o Pseudomonas putida KT2440 PP_5094 putative enzyme with PLP binding domain strong 42 80
o Paraburkholderia graminis OAS925 ABIE53_000841 pyridoxal phosphate enzyme (YggS family) strong 40 90
o Burkholderia phytofirmans PsJN BPHYT_RS03495 hypothetical protein strong 39 90
o Dickeya dianthicola 67-19 HGI48_RS17345 YggS family pyridoxal phosphate-dependent enzyme insig. 38 87
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02905 YggS family pyridoxal phosphate-dependent enzyme insig. 34 94
  Dickeya dianthicola ME23 DZA65_RS18435 YggS family pyridoxal phosphate-dependent enzyme insig. 38 87
o Pseudomonas sp. BP01 JOY50_RS20910 YggS family pyridoxal phosphate-dependent enzyme insig. 42 78
o Vibrio cholerae E7946 ATCC 55056 CSW01_02455 YggS family pyridoxal phosphate enzyme cofit 38 84
o Rahnella sp. WP5 EX31_RS02685 YggS family pyridoxal phosphate-dependent enzyme insig. 38 87
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06285 YggS family pyridoxal phosphate enzyme strong 35 82
o Dickeya dadantii 3937 DDA3937_RS17300 YggS family pyridoxal phosphate-dependent enzyme sig. 38 87
o Pseudomonas orientalis W4I3 QF045_RS01125 YggS family pyridoxal phosphate-dependent enzyme insig. 39 88
o Cupriavidus basilensis FW507-4G11 RR42_RS17355 hypothetical protein strong 42 83
o Pseudomonas simiae WCS417 PS417_26725 hypothetical protein sig. 41 84
o Pectobacterium carotovorum WPP14 HER17_RS03810 YggS family pyridoxal phosphate-dependent enzyme cofit 36 87
o Pseudomonas stutzeri RCH2 Psest_0284 pyridoxal phosphate enzyme, YggS family strong 40 87
o Herbaspirillum seropedicae SmR1 HSERO_RS18995 hypothetical protein strong 39 88
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1011 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC sig. 39 84
o Rhodanobacter denitrificans MT42 LRK55_RS02655 YggS family pyridoxal phosphate-dependent enzyme insig. 34 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11740 YggS family pyridoxal phosphate-dependent enzyme cofit 34 79
  Bacteroides stercoris CC31F HMPREF1181_RS10865 YggS family pyridoxal phosphate-dependent enzyme insig. 34 79
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2342 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC no data 40 88
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_03450 YggS family pyridoxal phosphate enzyme cofit 39 87
o Erwinia tracheiphila SCR3 LU632_RS05460 YggS family pyridoxal phosphate-dependent enzyme strong 39 87
  Rhodospirillum rubrum S1H Rru_A1141 Protein of unknown function UPF0001 (NCBI) insig. 37 88
o Acinetobacter radioresistens SK82 MPMX26_02404 Pyridoxal phosphate homeostasis protein strong 35 84
o Shewanella oneidensis MR-1 SO3352 conserved hypothetical protein TIGR00044 (NCBI ptt file) strong 35 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1711.1 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 41 77
o Ralstonia sp. UNC404CL21Col ABZR87_RS01225 YggS family pyridoxal phosphate-dependent enzyme strong 39 88
  Pectobacterium carotovorum WPP14 HER17_RS01985 YggS family pyridoxal phosphate-dependent enzyme insig. 37 94
o Pseudomonas sp. RS175 PFR28_04242 Pyridoxal phosphate homeostasis protein strong 39 88
o Rhodanobacter sp. FW510-T8 OKGIIK_09885 Pyridoxal phosphate homeostasis protein insig. 33 95
o Synechococcus elongatus PCC 7942 Synpcc7942_2060 ylmE hypothetical protein strong 40 89
  Bacteroides thetaiotaomicron VPI-5482 BT1332 conserved hypothetical protein (NCBI ptt file) insig. 34 78
  Cellulophaga baltica 18 M666_RS17595 YggS family pyridoxal phosphate-dependent enzyme insig. 31 79
o Pseudomonas fluorescens SBW25 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme cofit 39 88
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme strong 39 88
o Variovorax sp. OAS795 ABID97_RS00250 YggS family pyridoxal phosphate-dependent enzyme no data 36 87