Homologs of GFF379 from Variovorax sp. SCN45

Ribonuclease HII (EC 3.1.26.4)
SEED: Ribonuclease HII (EC 3.1.26.4)
KEGG: ribonuclease HII

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF379 Ribonuclease HII (EC 3.1.26.4) insig. 100 100
o Variovorax sp. OAS795 ABID97_RS17100 ribonuclease HII insig. 85 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4901 Ribonuclease HII (EC 3.1.26.4) insig. 77 86
  Acidovorax sp. GW101-3H11 Ac3H11_432 Ribonuclease HII (EC 3.1.26.4) insig. 77 76
  Paraburkholderia graminis OAS925 ABIE53_002489 ribonuclease HII sig. 62 87
o Burkholderia phytofirmans PsJN BPHYT_RS12070 ribonuclease HII insig. 59 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00624 RNase HII insig. 60 90
o Paraburkholderia sabiae LMG 24235 QEN71_RS06490 ribonuclease HII sig. 58 91
o Ralstonia solanacearum GMI1000 RS_RS07115 ribonuclease HII no data 61 83
o Cupriavidus basilensis FW507-4G11 RR42_RS11805 ribonuclease HII insig. 59 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00445 ribonuclease HII no data 61 83
o Ralstonia solanacearum UW163 UW163_RS13775 ribonuclease HII no data 61 83
o Ralstonia sp. UNC404CL21Col ABZR87_RS11895 ribonuclease HII insig. 62 82
o Ralstonia solanacearum PSI07 RPSI07_RS17030 ribonuclease HII insig. 60 83
o Serratia liquefaciens MT49 IAI46_20190 ribonuclease HII insig. 59 81
o Pseudomonas stutzeri RCH2 Psest_2828 Ribonuclease HII no data 59 81
o Dickeya dadantii 3937 DDA3937_RS05185 ribonuclease HII insig. 60 81
  Pseudomonas sp. S08-1 OH686_06415 Ribonuclease HII no data 63 76
  Pseudomonas segetis P6 ACVTMO_RS17060 rnhB ribonuclease HII insig. 63 78
o Dickeya dianthicola 67-19 HGI48_RS05185 ribonuclease HII no data 60 81
o Dickeya dianthicola ME23 DZA65_RS05525 ribonuclease HII no data 60 81
  Pseudomonas fluorescens FW300-N2E3 AO353_16530 ribonuclease HII insig. 61 79
  Rahnella sp. WP5 EX31_RS12965 ribonuclease HII insig. 62 78
o Pseudomonas simiae WCS417 PS417_06280 ribonuclease HII insig. 60 81
o Pseudomonas syringae pv. syringae B728a Psyr_1357 RNase HII insig. 58 87
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1357 RNase HII insig. 58 87
o Pseudomonas fluorescens SBW25 PFLU_RS06345 ribonuclease HII insig. 60 81
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06345 ribonuclease HII sig. 60 81
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01426 Ribonuclease HII cofit 60 81
o Pseudomonas sp. SVBP6 COO64_RS19710 rnhB ribonuclease HII insig. 61 81
o Pseudomonas orientalis W4I3 QF045_RS09125 ribonuclease HII insig. 60 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3055 Ribonuclease HII (EC 3.1.26.4) insig. 59 79
  Pseudomonas sp. BP01 JOY50_RS23670 rnhB ribonuclease HII insig. 62 78
  Pseudomonas putida KT2440 PP_1605 Ribonuclease HII insig. 62 78
o Pseudomonas sp. RS175 PFR28_00410 Ribonuclease HII no data 56 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4694 Ribonuclease HII (EC 3.1.26.4) no data 59 79
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3098 Ribonuclease HII (EC 3.1.26.4) insig. 59 79
  Pseudomonas fluorescens FW300-N2C3 AO356_05970 ribonuclease HII insig. 58 79
  Pseudomonas sp. DMC3 GFF2067 Ribonuclease HII insig. 59 79
o Pantoea sp. MT58 IAI47_15460 ribonuclease HII insig. 57 81
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF39 Ribonuclease HII (EC 3.1.26.4) insig. 59 81
o Klebsiella pneumoniae MKP103 KDGMDA_13530 lipid-A-disaccharide synthase no data 58 81
o Enterobacter asburiae PDN3 EX28DRAFT_3771 RNase HII (EC 3.1.26.4) insig. 57 83
  Pseudomonas aeruginosa PA14 IKLFDK_18595 ribonuclease HII insig. 61 76
o Escherichia coli ECOR27 NOLOHH_02485 rnhB ribonuclease HII insig. 59 81
o Escherichia coli ECRC62 BNILDI_09185 rnhB ribonuclease HII cofit 59 81
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03480 Ribonuclease HII cofit 59 81
o Escherichia coli BW25113 b0183 rnhB ribonuclease HII (NCBI) insig. 59 81
o Pectobacterium carotovorum WPP14 HER17_RS16265 ribonuclease HII insig. 58 81
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13545 ribonuclease HII cofit 56 81
  Dechlorosoma suillum PS Dsui_2680 ribonuclease HII insig. 59 79
  Pseudomonas aeruginosa MRSN321 DY961_RS14765 rnhB;go_function=RNA ribonuclease HII insig. 61 76
  Pseudomonas aeruginosa PUPa3 DQ20_RS42360 rnhB;go_function=RNA ribonuclease HII insig. 61 76
  Kangiella aquimarina DSM 16071 B158DRAFT_1094 RNase HII (EC 3.1.26.4) insig. 59 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_11440 ribonuclease HII cofit 56 78
  Acinetobacter baumannii LAC-4 RR41_RS09985 ribonuclease HII insig. 59 78
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15250 rnhB ribonuclease HII cofit 56 79
o Erwinia tracheiphila SCR3 LU632_RS19895 rnhB ribonuclease HII no data 55 81
  Castellaniella sp019104865 MT123 ABCV34_RS04040 ribonuclease HII insig. 60 80
o Escherichia coli ECOR38 HEPCGN_08095 rnhB ribonuclease HII insig. 59 81
o Escherichia coli ECRC100 OKFHMN_10140 rnhB ribonuclease HII cofit 59 81
o Escherichia coli ECRC101 MCAODC_00655 rnhB ribonuclease HII insig. 59 81
o Escherichia coli ECRC102 NIAGMN_07990 rnhB ribonuclease HII insig. 59 81
o Escherichia coli ECRC98 JDDGAC_13735 rnhB ribonuclease HII insig. 59 81
o Escherichia coli ECRC99 KEDOAH_18015 rnhB ribonuclease HII no data 59 81
o Klebsiella michiganensis M5al BWI76_RS05285 ribonuclease HII no data 58 81
o Escherichia fergusonii Becca EFB2_03861 Ribonuclease HII insig. 58 81
  Shewanella loihica PV-4 Shew_2621 ribonuclease H (RefSeq) insig. 56 78
  Herbaspirillum seropedicae SmR1 HSERO_RS10945 ribonuclease HII insig. 58 78
o Enterobacter sp. TBS_079 MPMX20_00867 Ribonuclease HII insig. 57 81
o Erwinia amylovora T8 OLJFJH_00560 ribonuclease HII insig. 56 82
o Escherichia coli Nissle 1917 ECOLIN_RS00995 ribonuclease HII no data 58 81
o Escherichia coli BL21 ECD_00181 ribonuclease HII insig. 58 81
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS21650 ribonuclease HII insig. 59 78
  Marinobacter adhaerens HP15 HP15_1180 ribonuclease HII insig. 62 78
  Alteromonas macleodii MIT1002 MIT1002_01017 Ribonuclease HII insig. 57 78
  Acinetobacter radioresistens SK82 MPMX26_01083 Ribonuclease HII insig. 60 78
  Sphingobium sp. HT1-2 GFF2572 Ribonuclease HII (EC 3.1.26.4) cofit 57 79
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS06640 ribonuclease HII insig. 57 76
o Shewanella amazonensis SB2B Sama_1153 rnhB ribonuclease HII (RefSeq) insig. 57 82
  Rhodanobacter sp. FW510-T8 OKGIIK_10205 rnhB ribonuclease HII insig. 59 76
o Shewanella oneidensis MR-1 SO1643 rnhB ribonuclease HII (NCBI ptt file) insig. 58 79
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3570.1 Ribonuclease HII (EC 3.1.26.4) insig. 52 89
  Rhodanobacter denitrificans MT42 LRK55_RS03070 ribonuclease HII insig. 58 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS03320 ribonuclease HII insig. 58 76
  Shewanella sp. ANA-3 Shewana3_2801 rnhB ribonuclease HII (RefSeq) insig. 56 79
  Methylophilus sp. DMC18 GFF1013 Ribonuclease HII insig. 53 76
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1962 RNase HII (EC 3.1.26.4) insig. 57 78
  Agrobacterium fabrum C58 Atu0720 ribonuclease HII insig. 53 76
  Rhizobium sp. OAE497 ABIE40_RS05340 ribonuclease HII insig. 54 76
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09510 ribonuclease HII insig. 52 78
  Lysobacter sp. OAE881 ABIE51_RS06875 ribonuclease HII insig. 56 79
  Sinorhizobium meliloti 1021 SMc00867 ribonuclease HII no data 55 76
  Phaeobacter inhibens DSM 17395 PGA1_c33580 ribonuclease HII insig. 52 76
o Magnetospirillum magneticum AMB-1 AMB_RS20190 ribonuclease HII insig. 49 81
  Desulfovibrio vulgaris Hildenborough JW710 DVU0834 rnhB ribonuclease HII (TIGR) insig. 50 77
  Bosea sp. OAE506 ABIE41_RS22855 ribonuclease HII no data 56 78
  Fusobacterium nucleatum SB010 HUW76_08570 ribonuclease HII cofit 51 74
  Caulobacter crescentus NA1000 CCNA_00383 ribonuclease HII insig. 50 76
  Caulobacter crescentus NA1000 Δfur CCNA_00383 ribonuclease HII cofit 50 76