Homologs of GFF3719 from Xanthobacter sp. DMC5

tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
SEED: tRNA-i(6)A37 methylthiotransferase
KEGG: bifunctional enzyme involved in thiolation and methylation of tRNA

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF3719 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase sig. 100 100
o Agrobacterium fabrum C58 Atu0356 miaB protein sig. 66 89
o Sinorhizobium meliloti 1021 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 65 91
o Bosea sp. OAE506 ABIE41_RS04495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 65 91
o Rhizobium sp. OAE497 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 65 92
o Rhodopseudomonas palustris CGA009 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 62 95
o Magnetospirillum magneticum AMB-1 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 63 90
o Azospirillum sp. SherDot2 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 60 92
o Rhodospirillum rubrum S1H Rru_A3770 tRNA-i(6)A37 modification enzyme MiaB (NCBI) strong 61 90
o Sphingobium sp. HT1-2 GFF3937 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) cofit 61 90
o Dinoroseobacter shibae DFL-12 Dshi_1019 RNA modification enzyme, MiaB family (RefSeq) insig. 61 91
o Phaeobacter inhibens DSM 17395 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB sig. 60 91
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 61 90
o Caulobacter crescentus NA1000 CCNA_00054 tRNA 2-methylthioadenosine synthase strong 60 90
o Caulobacter crescentus NA1000 Δfur CCNA_00054 tRNA 2-methylthioadenosine synthase cofit 60 90
o Azospirillum brasilense Sp245 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 61 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB insig. 59 90
o Lysobacter sp. OAE881 ABIE51_RS15455 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 51 90
o Rhodanobacter denitrificans MT42 LRK55_RS13465 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 50 90
o Acinetobacter radioresistens SK82 MPMX26_02667 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase cofit 49 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13750 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 51 90
o Pseudomonas sp. S08-1 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 52 90
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS14850 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 50 90
o Dechlorosoma suillum PS Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB cofit 51 90
o Castellaniella sp019104865 MT123 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 51 90
o Kangiella aquimarina DSM 16071 B158DRAFT_0099 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB sig. 50 90
o Alteromonas macleodii MIT1002 MIT1002_01480 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB insig. 49 90
o Shewanella amazonensis SB2B Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) strong 49 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09895 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 49 90
o Erwinia amylovora T8 OLJFJH_17145 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 50 90
o Rhodanobacter sp. FW510-T8 OKGIIK_02990 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 49 90
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS14055 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 49 90
o Pantoea sp. MT58 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 49 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2224.1 tRNA-i(6)A37 methylthiotransferase strong 50 90
o Escherichia coli ECRC62 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 50 90
o Escherichia coli BL21 ECD_00629 tRNA-i(6)A37 methylthiotransferase strong 50 90
o Escherichia coli ECOR27 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 50 90
o Escherichia coli ECOR38 HEPCGN_01005 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 50 90
o Escherichia coli ECRC100 OKFHMN_07225 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 50 90
o Escherichia coli ECRC101 MCAODC_26440 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 50 90
o Escherichia coli ECRC102 NIAGMN_05280 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 50 90
o Escherichia coli ECRC98 JDDGAC_10870 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 50 90
o Escherichia coli ECRC99 KEDOAH_20745 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 50 90
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase cofit 50 90
o Escherichia coli BW25113 b0661 miaB isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) sig. 50 90
o Vibrio cholerae E7946 ATCC 55056 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 49 90
o Marinobacter adhaerens HP15 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 48 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4579 tRNA-i(6)A37 methylthiotransferase strong 50 90
o Serratia liquefaciens MT49 IAI46_06025 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 49 90
o Acinetobacter baumannii LAC-4 RR41_RS02450 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 47 88
o Escherichia fergusonii Becca EFB2_03438 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 50 90
o Erwinia tracheiphila SCR3 LU632_RS16305 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 49 90
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_02360 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 49 90
o Pseudomonas stutzeri RCH2 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB sig. 51 90
o Escherichia coli Nissle 1917 ECOLIN_RS03555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 50 90
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF613 tRNA-i(6)A37 methylthiotransferase cofit 49 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 49 90
o Shewanella oneidensis MR-1 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) strong 48 90
o Pseudomonas sp. SVBP6 COO64_RS15510 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 50 90
o Shewanella sp. ANA-3 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) strong 48 90
o Pseudomonas aeruginosa MRSN321 DY961_RS12950 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 50 90
o Pseudomonas aeruginosa PA14 IKLFDK_20540 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 50 90
o Pseudomonas aeruginosa PUPa3 DQ20_RS48275 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 50 90
o Klebsiella michiganensis M5al BWI76_RS08135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 49 90
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase sig. 50 90
o Pseudomonas protegens RBAN4 FABNJH_27430 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 50 90
o Enterobacter asburiae PDN3 EX28DRAFT_2310 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB insig. 49 89
o Pseudomonas fluorescens FW300-N2E3 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 50 90
o Pseudomonas sp. DMC3 GFF3900 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 50 90
o Enterobacter sp. TBS_079 MPMX20_01311 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 49 89
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05078 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 50 90
o Pseudomonas syringae pv. syringae B728a Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB sig. 50 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 50 90
o Pectobacterium carotovorum WPP14 HER17_RS15165 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 48 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase insig. 50 90
o Klebsiella pneumoniae MKP103 KDGMDA_16495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 49 90
o Pseudomonas fluorescens SBW25 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 50 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 50 90
o Pseudomonas fluorescens FW300-N2C3 AO356_15410 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 50 90
o Burkholderia phytofirmans PsJN BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase sig. 48 90
o Rahnella sp. WP5 EX31_RS23205 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 48 90
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 48 90
o Pseudomonas orientalis W4I3 QF045_RS26910 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 50 90
o Pseudomonas simiae WCS417 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 50 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5018 tRNA-i(6)A37 methylthiotransferase sig. 50 90
o Pseudomonas segetis P6 ACVTMO_RS05310 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 50 90
o Pseudomonas sp. RS175 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 50 90
o Klebsiella pneumoniae MRSN742743 KFA93_RS02135 miaB;go_function=transferase tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 48 90
o Dickeya dianthicola 67-19 HGI48_RS06295 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 47 90
o Ralstonia solanacearum PSI07 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 49 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 48 91
o Ralstonia solanacearum UW163 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 48 91
o Shewanella loihica PV-4 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) strong 47 90
o Ralstonia solanacearum GMI1000 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 49 90
o Dickeya dadantii 3937 DDA3937_RS06250 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 47 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 48 91
o Dickeya dianthicola ME23 DZA65_RS06640 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 46 90
o Herbaspirillum seropedicae SmR1 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 47 90
o Acidovorax sp. GW101-3H11 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase insig. 48 90
o Cupriavidus basilensis FW507-4G11 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase insig. 47 90
o Variovorax sp. SCN45 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) insig. 47 92
o Variovorax sp. OAS795 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 47 88
o Methylophilus sp. DMC18 GFF2710 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 47 88
o Synechocystis sp000284455 PCC 6803 SGL_RS04845 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 42 90
o Synechococcus elongatus PCC 7942 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 43 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU0984 miaB tRNA-i(6)A37 modification enzyme MiaB (TIGR) sig. 43 91
o Bacteroides stercoris CC31F HMPREF1181_RS01770 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 38 90
o Bacteroides thetaiotaomicron VPI-5482 BT3195 conserved hypothetical protein (NCBI ptt file) strong 36 90
o Desulfovibrio vulgaris Miyazaki F DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) strong 38 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11280 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 37 90
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17135 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 38 91
o Bacteroides ovatus ATCC 8483 BACOVA_02895 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 36 90
o Phocaeicola dorei CL03T12C01 ABI39_RS05650 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 37 90
o Mycobacterium tuberculosis H37Rv Rv2733c Conserved hypothetical alanine, arginine-rich protein sig. 39 89
o Bifidobacterium breve UCC2003 BBR_RS16570 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 38 90
o Fusobacterium nucleatum SB010 HUW76_07655 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 36 89
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05315 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 36 93
o Cellulophaga baltica 18 M666_RS02310 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 37 91
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2376 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB strong 36 90
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21675 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 36 82
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18330 MiaB/RimO family radical SAM methylthiotransferase insig. 37 77
  Paraburkholderia graminis OAS925 ABIE53_003479 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB insig. 45 59
  Azospirillum sp. SherDot2 MPMX19_00599 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB no data 34 89
  Rhodospirillum rubrum S1H Rru_A1182 MiaB-like tRNA modifying enzyme (NCBI) no data 35 86
  Synechocystis sp000284455 PCC 6803 SGL_RS15315 30S ribosomal protein S12 methylthiotransferase RimO strong 32 91
  Magnetospirillum magneticum AMB-1 AMB_RS01090 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB no data 35 89
  Azospirillum brasilense Sp245 AZOBR_RS14165 2-methylthioadenine synthase no data 34 89
  Kangiella aquimarina DSM 16071 B158DRAFT_2271 MiaB-like tRNA modifying enzyme cofit 32 85
  Synechococcus elongatus PCC 7942 Synpcc7942_2512 hypothetical protein strong 33 88
  Caulobacter crescentus NA1000 CCNA_03798 tRNA 2-methylthioadenosine synthase-like protein no data 35 76
  Caulobacter crescentus NA1000 Δfur CCNA_03798 tRNA 2-methylthioadenosine synthase-like protein no data 35 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05370 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB sig. 29 89
  Phaeobacter inhibens DSM 17395 PGA1_c33960 MiaB-like tRNA modifying enzyme strong 32 85
  Desulfovibrio vulgaris Miyazaki F DvMF_1402 RNA modification enzyme, MiaB family (RefSeq) insig. 35 77
  Fusobacterium nucleatum SB010 HUW76_04185 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 28 91
  Klebsiella pneumoniae MKP103 KDGMDA_17375 30S ribosomal protein S12 methylthiotransferase RimO insig. 33 84
  Klebsiella pneumoniae MRSN742743 KFA93_RS01275 rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase 30S ribosomal protein S12 methylthiotransferase RimO insig. 33 84
  Dinoroseobacter shibae DFL-12 Dshi_3229 MiaB-like tRNA modifying enzyme (RefSeq) sig. 33 89
  Shewanella amazonensis SB2B Sama_0485 MiaB-like putative RNA modifying enzyme YliG (RefSeq) insig. 35 82
  Shewanella oneidensis MR-1 SO4072 yliG MiaB-like putative RNA modifying enzyme YliG (NCBI ptt file) sig. 33 86
  Dickeya dianthicola ME23 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO insig. 32 90
  Shewanella sp. ANA-3 Shewana3_3627 MiaB-like tRNA modifying enzyme YliG (RefSeq) sig. 34 82
  Dickeya dianthicola 67-19 HGI48_RS09400 30S ribosomal protein S12 methylthiotransferase RimO insig. 32 90
  Enterobacter asburiae PDN3 EX28DRAFT_2131 ribosomal protein S12 methylthiotransferase RimO insig. 31 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 31 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04300 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 27 88
  Enterobacter sp. TBS_079 MPMX20_01473 Ribosomal protein S12 methylthiotransferase RimO insig. 33 84
  Klebsiella michiganensis M5al BWI76_RS09115 30S ribosomal protein S12 methylthiotransferase RimO sig. 33 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06200 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 28 88
  Castellaniella sp019104865 MT123 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO cofit 32 91
  Dickeya dadantii 3937 DDA3937_RS09385 30S ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia coli BL21 ECD_00802 ribosomal protein S12 methylthiotransferase insig. 31 90
  Escherichia coli ECOR27 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia coli ECOR38 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia coli ECRC101 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia coli ECRC102 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 31 90
  Escherichia coli ECRC62 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia coli ECRC98 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO sig. 31 90
  Escherichia coli ECRC99 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO no data 31 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia coli BW25113 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) insig. 31 90
  Pectobacterium carotovorum WPP14 HER17_RS12755 30S ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia fergusonii Becca EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Escherichia coli Nissle 1917 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO no data 31 90
  Marinobacter adhaerens HP15 HP15_2459 MiaB-like tRNA modifying enzyme YliG insig. 32 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2356 MiaB-like tRNA modifying enzyme strong 27 89
  Escherichia coli ECRC100 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 31 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 90
  Cellulophaga baltica 18 M666_RS18185 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB sig. 28 90
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08260 30S ribosomal protein S12 methylthiotransferase RimO insig. 32 80
  Pseudomonas orientalis W4I3 QF045_RS08795 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01347 Ribosomal protein S12 methylthiotransferase RimO cofit 30 87
  Rhodospirillum rubrum S1H Rru_A2811 hypothetical protein (NCBI) sig. 34 75
  Alteromonas macleodii MIT1002 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO cofit 32 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07615 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 31 79
  Pseudomonas fluorescens SBW25 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO sig. 30 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO sig. 32 80
  Rhodanobacter denitrificans MT42 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO cofit 32 80
  Sphingobium sp. HT1-2 GFF317 tRNA t(6)A37-methylthiotransferase (EC 2.8.4.5) cofit 31 80
  Pseudomonas fluorescens FW300-N2E3 AO353_16875 ribosomal protein S12 methylthiotransferase RimO sig. 31 80
  Pseudomonas putida KT2440 PP_1197 ribosomal protein S12 methylthiotransferase insig. 31 82
  Rhodopseudomonas palustris CGA009 TX73_001305 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 34 71
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20035 rimO 30S ribosomal protein S12 methylthiotransferase RimO cofit 32 83
  Erwinia tracheiphila SCR3 LU632_RS09580 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 32 83
  Pseudomonas protegens RBAN4 FABNJH_06525 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 31 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 30 80
  Pseudomonas simiae WCS417 PS417_05880 ribosomal protein S12 methylthiotransferase insig. 30 87
  Bacteroides ovatus ATCC 8483 BACOVA_03193 tRNA methylthiotransferase YqeV strong 29 79
  Pseudomonas sp. DMC3 GFF2126 Ribosomal protein S12 methylthiotransferase RimO insig. 31 80
  Bacteroides thetaiotaomicron VPI-5482 BT2153 putative Fe-S oxidoreductases (NCBI ptt file) strong 29 80
  Desulfovibrio vulgaris Hildenborough JW710 DVU0897 RNA modification enzyme, MiaB-family (TIGR) sig. 31 88
  Pseudomonas sp. RS175 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO insig. 31 80
  Phocaeicola dorei CL03T12C01 ABI39_RS00040 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 30 79
  Cellulophaga baltica 18 M666_RS09445 30S ribosomal protein S12 methylthiotransferase RimO insig. 28 90
  Xanthobacter sp. DMC5 GFF1050 Ribosomal protein S12 methylthiotransferase RimO insig. 31 90
  Pseudomonas segetis P6 ACVTMO_RS08100 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 31 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04095 30S ribosomal protein S12 methylthiotransferase RimO sig. 30 87
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO insig. 32 81
  Pseudomonas aeruginosa PUPa3 DQ20_RS44925 rimO;go_function=S-methyltransferase 30S ribosomal protein S12 methylthiotransferase RimO sig. 31 82
  Acinetobacter baumannii LAC-4 RR41_RS08040 30S ribosomal protein S12 methylthiotransferase RimO no data 31 89
  Pseudomonas aeruginosa MRSN321 DY961_RS07875 rimO;go_function=S-methyltransferase 30S ribosomal protein S12 methylthiotransferase RimO sig. 31 82
  Methylophilus sp. DMC18 GFF1218 Ribosomal protein S12 methylthiotransferase RimO insig. 30 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15685 30S ribosomal protein S12 methylthiotransferase RimO insig. 28 90
  Bacteroides stercoris CC31F HMPREF1181_RS16335 30S ribosomal protein S12 methylthiotransferase RimO insig. 28 89
  Pseudomonas stutzeri RCH2 Psest_2632 ribosomal protein S12 methylthiotransferase RimO sig. 32 79
  Rhodanobacter sp. FW510-T8 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 32 80
  Pseudomonas sp. SVBP6 COO64_RS20000 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 79
  Bacteroides stercoris CC31F HMPREF1181_RS08710 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB sig. 29 80
  Rhizobium sp. OAE497 ABIE40_RS18320 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 32 71
  Agrobacterium fabrum C58 Atu2694 hypothetical protein insig. 32 80
  Acinetobacter radioresistens SK82 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO strong 31 89
  Rhodopseudomonas palustris CGA009 TX73_013865 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 90
  Phocaeicola dorei CL03T12C01 ABI39_RS17125 30S ribosomal protein S12 methylthiotransferase RimO cofit 29 87
  Pseudomonas aeruginosa PA14 IKLFDK_04105 30S ribosomal protein S12 methylthiotransferase RimO sig. 31 82
  Pseudomonas syringae pv. syringae B728a Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 30 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1392 SSU ribosomal protein S12P methylthiotransferase insig. 30 79
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4154 MiaB-like tRNA modifying enzyme sig. 30 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU3151 MiaB-like tRNA modifying enzyme YliG, TIGR01125 (TIGR) sig. 33 83
  Pseudomonas sp. BP01 JOY50_RS01920 rimO 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 82
  Kangiella aquimarina DSM 16071 B158DRAFT_2522 SSU ribosomal protein S12P methylthiotransferase (EC 2.-.-.-) insig. 31 79
  Bosea sp. OAE506 ABIE41_RS15895 30S ribosomal protein S12 methylthiotransferase RimO insig. 30 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase insig. 30 88
  Pseudomonas fluorescens FW300-N2C3 AO356_05600 ribosomal protein S12 methylthiotransferase RimO sig. 32 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase sig. 32 70
  Sinorhizobium meliloti 1021 SMc03855 hypothetical protein strong 32 80
  Bacteroides ovatus ATCC 8483 BACOVA_00737 ribosomal protein S12 methylthiotransferase RimO insig. 28 83
  Pseudomonas sp. S08-1 OH686_18875 ribosomal protein S12 methylthiotransferase RimO cofit 31 79
  Burkholderia phytofirmans PsJN BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO no data 29 89
  Lysobacter sp. OAE881 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO insig. 32 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16365 30S ribosomal protein S12 methylthiotransferase RimO sig. 27 88
  Magnetospirillum magneticum AMB-1 AMB_RS15345 30S ribosomal protein S12 methylthiotransferase RimO cofit 30 90
  Xanthobacter sp. DMC5 GFF1768 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB insig. 32 81
  Azospirillum brasilense Sp245 AZOBR_RS14980 ribosomal protein S12 methylthiotransferase insig. 30 93
  Azospirillum sp. SherDot2 MPMX19_05761 Ribosomal protein S12 methylthiotransferase RimO cofit 30 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase insig. 30 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0564 ribosomal protein S12 methylthiotransferase RimO insig. 27 90
  Bosea sp. OAE506 ABIE41_RS11695 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 31 87
  Bacteroides thetaiotaomicron VPI-5482 BT0913 putative Fe-S oxidoreductase (NCBI ptt file) sig. 26 88
  Paraburkholderia graminis OAS925 ABIE53_002068 ribosomal protein S12 methylthiotransferase insig. 29 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10685 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 28 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO strong 29 90
  Sphingobium sp. HT1-2 GFF2264 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) cofit 29 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01480 30S ribosomal protein S12 methylthiotransferase RimO insig. 29 90
  Ralstonia solanacearum UW163 UW163_RS14790 30S ribosomal protein S12 methylthiotransferase RimO insig. 29 90
  Cupriavidus basilensis FW507-4G11 RR42_RS07640 ribosomal protein S12 methylthiotransferase insig. 29 90
  Ralstonia solanacearum PSI07 RPSI07_RS16010 30S ribosomal protein S12 methylthiotransferase RimO insig. 29 90
  Paraburkholderia graminis OAS925 ABIE53_003478 tRNA A37 methylthiotransferase MiaB insig. 52 31
  Ralstonia solanacearum GMI1000 RS_RS08245 30S ribosomal protein S12 methylthiotransferase RimO insig. 29 90