Homologs of PS417_17125 from Pseudomonas simiae WCS417

transcriptional regulator
SEED: FIG033889: YebC paralog in Betaproteobacteria

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_17125 transcriptional regulator sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS19065 YebC/PmpR family DNA-binding transcriptional regulator sig. 98 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19065 YebC/PmpR family DNA-binding transcriptional regulator sig. 98 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03726 putative transcriptional regulatory protein cofit 98 100
o Pseudomonas orientalis W4I3 QF045_RS18795 YebC/PmpR family DNA-binding transcriptional regulator no data 97 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2577 FIG033889: YebC paralog in Betaproteobacteria insig. 96 100
o Pseudomonas sp. DMC3 GFF1461 putative transcriptional regulatory protein insig. 95 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3965 FIG033889: YebC paralog in Betaproteobacteria insig. 94 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2205 FIG033889: YebC paralog in Betaproteobacteria insig. 93 100
o Pseudomonas sp. RS175 PFR28_01240 putative transcriptional regulatory protein insig. 92 100
o Pseudomonas fluorescens FW300-N2C3 AO356_01680 transcriptional regulator sig. 92 100
o Pseudomonas fluorescens FW300-N2E3 AO353_20255 transcriptional regulator insig. 91 100
o Pseudomonas sp. SVBP6 COO64_RS07575 YebC/PmpR family DNA-binding transcriptional regulator insig. 80 100
o Pseudomonas sp. S08-1 OH686_20180 YebC paralog in Betaproteobacteria insig. 80 100
o Pseudomonas putida KT2440 PP_2550 putative transcriptional regulatory protein insig. 78 99
o Pseudomonas segetis P6 ACVTMO_RS16025 YebC/PmpR family DNA-binding transcriptional regulator no data 76 100
o Pseudomonas stutzeri RCH2 Psest_2795 Uncharacterized conserved protein no data 77 100
o Pseudomonas syringae pv. syringae B728a Psyr_3028 Protein of unknown function DUF28 insig. 77 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3028 Protein of unknown function DUF28 no data 77 100
o Pseudomonas sp. BP01 JOY50_RS10230 YebC/PmpR family DNA-binding transcriptional regulator insig. 77 99
o Variovorax sp. OAS795 ABID97_RS04355 YebC/PmpR family DNA-binding transcriptional regulator insig. 70 100
o Variovorax sp. SCN45 GFF4940 FIG033889: YebC paralog in Betaproteobacteria insig. 69 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5458 FIG033889: YebC paralog in Betaproteobacteria insig. 68 100
o Acidovorax sp. GW101-3H11 Ac3H11_2444 FIG000859: hypothetical protein insig. 65 100
  Cupriavidus basilensis FW507-4G11 RR42_RS04735 hypothetical protein strong 40 97
  Fusobacterium nucleatum SB010 HUW76_01460 YebC/PmpR family DNA-binding transcriptional regulator strong 40 97
  Dechlorosoma suillum PS Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family strong 39 97
  Herbaspirillum seropedicae SmR1 HSERO_RS17750 transcriptional regulator no data 38 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03540 YebC/PmpR family DNA-binding transcriptional regulator no data 39 91
  Ralstonia solanacearum UW163 UW163_RS10130 YebC/PmpR family DNA-binding transcriptional regulator no data 39 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS15405 YebC/PmpR family DNA-binding transcriptional regulator sig. 40 91
  Shewanella sp. ANA-3 Shewana3_1954 hypothetical protein (RefSeq) insig. 38 97
  Pseudomonas sp. S08-1 OH686_19120 Probable transcriptional regulatory protein YebC sig. 42 97
  Ralstonia solanacearum PSI07 RPSI07_RS13685 YebC/PmpR family DNA-binding transcriptional regulator no data 39 91
  Ralstonia solanacearum GMI1000 RS_RS10990 YebC/PmpR family DNA-binding transcriptional regulator sig. 39 91
  Shewanella oneidensis MR-1 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) strong 38 97
  Rhizobium sp. OAE497 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator insig. 41 97
  Methylophilus sp. DMC18 GFF2324 Transcriptional regulatory protein PmpR cofit 39 97
  Pseudomonas stutzeri RCH2 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family no data 39 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10850 YebC/PmpR family DNA-binding transcriptional regulator no data 38 98
  Sinorhizobium meliloti 1021 SMc03969 hypothetical protein strong 39 97
  Bifidobacterium breve UCC2003 BBR_RS15645 YebC/PmpR family DNA-binding transcriptional regulator no data 44 85
  Agrobacterium fabrum C58 Atu3727 hypothetical protein strong 38 97
  Paraburkholderia graminis OAS925 ABIE53_001546 YebC/PmpR family DNA-binding regulatory protein sig. 37 93
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04522 DNA-binding regulatory protein, YebC/PmpR family no data 37 93
  Phaeobacter inhibens DSM 17395 PGA1_c21770 DNA-binding regulatory protein, YebC/PmpR family no data 39 96
  Pseudomonas aeruginosa MRSN321 DY961_RS07610 YebC/PmpR family DNA-binding transcriptional regulator strong 38 97
  Pseudomonas aeruginosa PA14 IKLFDK_04360 YebC/PmpR family DNA-binding transcriptional regulator strong 38 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS45180 YebC/PmpR family DNA-binding transcriptional regulator no data 38 97
  Burkholderia phytofirmans PsJN BPHYT_RS06410 transcriptional regulator sig. 36 93
  Serratia liquefaciens MT49 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator cofit 37 97
  Marinobacter adhaerens HP15 HP15_2043 protein YebC insig. 36 97
  Rhodanobacter denitrificans MT42 LRK55_RS04700 YebC/PmpR family DNA-binding transcriptional regulator strong 38 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04920 YebC/PmpR family DNA-binding transcriptional regulator strong 38 97
  Shewanella amazonensis SB2B Sama_1842 hypothetical protein (RefSeq) insig. 36 97
  Bosea sp. OAE506 ABIE41_RS09460 YebC/PmpR family DNA-binding transcriptional regulator strong 40 97
  Pseudomonas sp. RS175 PFR28_03415 Transcriptional regulatory protein PmpR strong 37 97
  Kangiella aquimarina DSM 16071 B158DRAFT_1123 DNA-binding regulatory protein, YebC/PmpR family strong 36 97
  Pseudomonas segetis P6 ACVTMO_RS08345 YebC/PmpR family DNA-binding transcriptional regulator insig. 39 97
  Shewanella loihica PV-4 Shew_2078 hypothetical protein (RefSeq) no data 36 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC insig. 38 86
  Pseudomonas sp. DMC3 GFF5187 Transcriptional regulatory protein PmpR insig. 37 97
  Rahnella sp. WP5 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator insig. 37 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01650 YebC/PmpR family DNA-binding transcriptional regulator strong 38 98
  Pseudomonas fluorescens FW300-N2C3 AO356_18010 hypothetical protein strong 37 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5534 FIG000859: hypothetical protein YebC strong 37 97
  Acinetobacter radioresistens SK82 MPMX26_01851 putative transcriptional regulatory protein YebC cofit 37 98
  Enterobacter sp. TBS_079 MPMX20_02769 putative transcriptional regulatory protein YebC sig. 37 97
  Enterobacter asburiae PDN3 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family insig. 36 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02315 YebC/PmpR family DNA-binding transcriptional regulator cofit 35 97
  Dinoroseobacter shibae DFL-12 Dshi_2762 protein of unknown function DUF28 (RefSeq) strong 42 77
  Desulfovibrio vulgaris Miyazaki F DvMF_3201 hypothetical protein (RefSeq) strong 39 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU2259 conserved hypothetical protein TIGR01033 (TIGR) strong 37 97
  Acinetobacter baumannii LAC-4 RR41_RS11700 YebC/PmpR family DNA-binding transcriptional regulator no data 37 98
  Klebsiella pneumoniae MKP103 KDGMDA_25425 putative transcriptional regulatory protein KPK_1906 sig. 37 97
  Klebsiella pneumoniae MRSN742743 KFA93_RS07640 YebC/PmpR family DNA-binding transcriptional regulator sig. 37 97
  Klebsiella michiganensis M5al BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator no data 36 97
  Escherichia coli BL21 ECD_01895 UPF0082 family protein no data 38 100
  Escherichia fergusonii Becca EFB2_01929 putative transcriptional regulatory protein YeeN insig. 38 100
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01725 putative transcriptional regulatory protein YeeN insig. 38 100
  Escherichia coli Nissle 1917 ECOLIN_RS11460 YebC/PmpR family DNA-binding transcriptional regulator no data 38 100
  Escherichia coli BW25113 b1983 yeeN hypothetical protein (NCBI) sig. 38 100
  Rhodanobacter sp. FW510-T8 OKGIIK_01830 tACO1 YebC/PmpR family DNA-binding transcriptional regulator insig. 37 97
  Lysobacter sp. OAE881 ABIE51_RS05035 YebC/PmpR family DNA-binding transcriptional regulator insig. 35 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS24395 YebC/PmpR family DNA-binding transcriptional regulator strong 35 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12515 YebC/PmpR family DNA-binding transcriptional regulator strong 38 92
  Variovorax sp. SCN45 GFF303 Probable transcriptional regulatory protein YebC cofit 38 85
  Sphingobium sp. HT1-2 GFF491 Probable transcriptional regulatory protein YebC no data 38 95
  Pectobacterium carotovorum WPP14 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator insig. 36 97
  Pantoea sp. MT58 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator strong 35 97
  Castellaniella sp019104865 MT123 ABCV34_RS02555 YebC/PmpR family DNA-binding transcriptional regulator insig. 34 97
  Dickeya dadantii 3937 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator insig. 35 97
  Xanthobacter sp. DMC5 GFF83 putative transcriptional regulatory protein no data 39 96
  Escherichia coli ECOR27 NOLOHH_16120 ycdB putative transcriptional regulatory protein YcdB no data 37 100
  Mycobacterium tuberculosis H37Rv Rv2603c Highly conserved protein no data 35 98
  Escherichia coli ECOR38 HEPCGN_03510 ycdB putative transcriptional regulatory protein YcdB insig. 37 100
  Escherichia coli ECRC62 BNILDI_14915 ycdB putative transcriptional regulatory protein YcdB cofit 37 100
  Azospirillum brasilense Sp245 AZOBR_RS09035 transcriptional regulator insig. 39 96
  Escherichia coli ECRC100 OKFHMN_25175 ycdB putative transcriptional regulatory protein YcdB cofit 37 100
  Escherichia coli ECRC101 MCAODC_20215 ycdB putative transcriptional regulatory protein YcdB insig. 37 100