Homologs of Psest_0305 from Pseudomonas stutzeri RCH2

RNA methyltransferase, RsmE family
SEED: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase E

148 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_0305 RNA methyltransferase, RsmE family sig. 100 100
o Pseudomonas sp. S08-1 OH686_10855 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 80 100
o Pseudomonas segetis P6 ACVTMO_RS03135 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 79 100
o Pseudomonas sp. SVBP6 COO64_RS13645 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 80 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4630 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) strong 80 100
o Pseudomonas putida KT2440 PP_4985 16S rRNA m3U1498 methyltransferase sig. 79 100
o Pseudomonas sp. BP01 JOY50_RS09765 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 79 100
o Pseudomonas sp. DMC3 GFF180 Ribosomal RNA small subunit methyltransferase E cofit 79 100
o Pseudomonas fluorescens FW300-N2C3 AO356_13565 16S rRNA methyltransferase sig. 79 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2376 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) no data 77 100
o Pseudomonas orientalis W4I3 QF045_RS00940 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 77 100
o Pseudomonas aeruginosa MRSN321 DY961_RS22075 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 77 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS37225 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 77 100
o Pseudomonas sp. RS175 PFR28_04209 Ribosomal RNA small subunit methyltransferase E sig. 77 100
o Pseudomonas fluorescens FW300-N2E3 AO353_08050 16S rRNA methyltransferase strong 78 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05440 Ribosomal RNA small subunit methyltransferase E cofit 77 100
o Pseudomonas protegens RBAN4 FABNJH_29260 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 77 100
o Pseudomonas aeruginosa PA14 IKLFDK_23325 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 77 100
o Pseudomonas syringae pv. syringae B728a Psyr_0453 16S rRNA m(3)U-1498 methyltransferase insig. 77 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0453 16S rRNA m(3)U-1498 methyltransferase insig. 77 100
o Pseudomonas simiae WCS417 PS417_26545 16S rRNA methyltransferase strong 76 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1043 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) sig. 76 100
o Pseudomonas fluorescens SBW25 PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 76 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28200 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 76 100
o Marinobacter adhaerens HP15 HP15_2926 ribosomal RNA small subunit methyltransferase E cofit 46 100
o Alteromonas macleodii MIT1002 MIT1002_03054 Ribosomal RNA small subunit methyltransferase E cofit 45 100
o Methylophilus sp. DMC18 GFF2490 Ribosomal RNA small subunit methyltransferase E insig. 47 98
o Dickeya dadantii 3937 DDA3937_RS18555 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_03425 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 45 100
o Erwinia tracheiphila SCR3 LU632_RS05485 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 45 100
o Dickeya dianthicola ME23 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 46 100
o Rahnella sp. WP5 EX31_RS02660 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 46 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS03855 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 45 100
o Erwinia amylovora T8 OLJFJH_08575 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 45 100
o Escherichia coli BL21 ECD_02776 16S rRNA m(3)U1498 methyltransferase, SAM-dependent cofit 47 100
o Escherichia fergusonii Becca EFB2_00956 Ribosomal RNA small subunit methyltransferase E insig. 47 100
o Escherichia coli ECOR27 NOLOHH_11150 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Escherichia coli ECOR38 HEPCGN_18585 Ribosomal RNA small subunit methyltransferase E insig. 47 100
o Escherichia coli ECRC100 OKFHMN_19280 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Escherichia coli ECRC101 MCAODC_09800 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Escherichia coli ECRC102 NIAGMN_17045 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Escherichia coli ECRC62 BNILDI_09730 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Escherichia coli ECRC98 JDDGAC_22910 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Escherichia coli ECRC99 KEDOAH_08860 rsmE 16S rRNA (uracil(1498)-N(3))-methyltransferase no data 47 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00772 Ribosomal RNA small subunit methyltransferase E insig. 47 100
o Escherichia coli Nissle 1917 ECOLIN_RS16390 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Escherichia coli BW25113 b2946 yggJ orf, hypothetical protein (VIMSS) strong 47 100
o Serratia liquefaciens MT49 IAI46_21385 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Dickeya dianthicola 67-19 HGI48_RS18490 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 46 100
o Pectobacterium carotovorum WPP14 HER17_RS02640 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 44 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3048 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) insig. 47 100
o Pantoea sp. MT58 IAI47_03620 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 45 100
o Shewanella amazonensis SB2B Sama_0575 16S ribosomal RNA methyltransferase RsmE (RefSeq) insig. 43 100
o Shewanella sp. ANA-3 Shewana3_3444 16S ribosomal RNA methyltransferase RsmE (RefSeq) insig. 44 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_02495 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 48 100
o Shewanella oneidensis MR-1 SO0832 conserved hypothetical protein TIGR00046 (NCBI ptt file) strong 43 100
o Acinetobacter baumannii LAC-4 RR41_RS05720 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 46 96
o Klebsiella pneumoniae MKP103 KDGMDA_04585 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Klebsiella pneumoniae MRSN742743 KFA93_RS12130 rsmE;go_function=methyltransferase 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 47 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0180 RNA methyltransferase, RsmE family insig. 41 100
o Klebsiella michiganensis M5al BWI76_RS24070 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 45 100
o Enterobacter sp. TBS_079 MPMX20_03804 Ribosomal RNA small subunit methyltransferase E sig. 45 100
o Enterobacter asburiae PDN3 EX28DRAFT_2984 RNA methyltransferase, RsmE family insig. 45 100
o Shewanella loihica PV-4 Shew_3224 hypothetical protein (RefSeq) strong 44 100
o Rhodanobacter denitrificans MT42 LRK55_RS03930 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 45 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04160 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 45 93
o Acinetobacter radioresistens SK82 MPMX26_01001 Ribosomal RNA small subunit methyltransferase E cofit 45 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS01505 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 42 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05880 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 42 100
o Ralstonia solanacearum UW163 UW163_RS07745 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 42 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10230 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 44 100
o Ralstonia solanacearum PSI07 RPSI07_RS11365 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 42 100
o Rhodanobacter sp. FW510-T8 OKGIIK_11035 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 44 93
o Ralstonia solanacearum GMI1000 RS_RS13825 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 44 100
o Acidovorax sp. GW101-3H11 Ac3H11_4323 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) strong 42 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1558.1 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) no data 44 100
o Cupriavidus basilensis FW507-4G11 RR42_RS17590 16S rRNA methyltransferase insig. 40 98
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05765 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 43 93
o Dechlorosoma suillum PS Dsui_1568 RNA methyltransferase, RsmE family no data 47 100
o Lysobacter sp. OAE881 ABIE51_RS05260 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 41 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06311 16S rRNA (uracil1498-N3)-methyltransferase insig. 39 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS27020 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 39 99
o Variovorax sp. SCN45 GFF3255 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) insig. 39 92
o Burkholderia phytofirmans PsJN BPHYT_RS16855 16S rRNA methyltransferase strong 38 99
o Herbaspirillum seropedicae SmR1 HSERO_RS07110 16S rRNA methyltransferase sig. 40 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2462 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) cofit 40 90
o Paraburkholderia graminis OAS925 ABIE53_003540 16S rRNA (uracil1498-N3)-methyltransferase strong 38 99
o Castellaniella sp019104865 MT123 ABCV34_RS15445 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 42 92
  Azospirillum sp. SherDot2 MPMX19_00577 Ribosomal RNA small subunit methyltransferase E insig. 34 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0807 RNA methyltransferase, RsmE family insig. 35 98
  Synechococcus elongatus PCC 7942 Synpcc7942_0806 hypothetical protein cofit 36 87
  Azospirillum brasilense Sp245 AZOBR_RS11890 16S rRNA methyltransferase sig. 37 99
  Xanthobacter sp. DMC5 GFF1000 Ribosomal RNA small subunit methyltransferase E insig. 35 84
  Rhodopseudomonas palustris CGA009 TX73_005910 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 34 100
  Synechocystis sp000284455 PCC 6803 SGL_RS02335 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 31 89
  Agrobacterium fabrum C58 Atu0657 hypothetical protein strong 32 91
  Fusobacterium nucleatum SB010 HUW76_04180 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 29 87
  Phaeobacter inhibens DSM 17395 PGA1_c02950 RNA methyltransferase-like protein sig. 33 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23620 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 32 96
  Bacteroides ovatus ATCC 8483 BACOVA_05130 RNA methyltransferase, RsmE family insig. 33 89
  Caulobacter crescentus NA1000 CCNA_03528 RNA methyltransferase sig. 31 98
  Caulobacter crescentus NA1000 Δfur CCNA_03528 RNA methyltransferase cofit 31 98
  Rhizobium sp. OAE497 ABIE40_RS03520 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 30 92
  Bacteroides stercoris CC31F HMPREF1181_RS05940 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 32 91
  Sinorhizobium meliloti 1021 SMc00826 16S ribosomal RNA methyltransferase RsmE sig. 31 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17085 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 32 87
  Bacteroides thetaiotaomicron VPI-5482 BT4328 conserved hypothetical protein (NCBI ptt file) insig. 32 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3055 RNA methyltransferase, RsmE family sig. 32 88
  Dinoroseobacter shibae DFL-12 Dshi_3099 protein of unknown function DUF558 (RefSeq) sig. 31 98
  Bosea sp. OAE506 ABIE41_RS23100 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 34 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10135 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 33 88
  Sphingobium sp. HT1-2 GFF1069 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) cofit 33 85
  Bifidobacterium breve UCC2003 BBR_RS15150 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 30 92
  Cellulophaga baltica 18 M666_RS12115 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 28 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05265 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 28 89
  Magnetospirillum magneticum AMB-1 AMB_RS01240 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 34 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05940 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 28 88
  Phocaeicola dorei CL03T12C01 ABI39_RS18150 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 29 88
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00350 16S rRNA (uracil(1498)-N(3))-methyltransferase no data 29 90
  Rhodospirillum rubrum S1H Rru_A0571 hypothetical protein (NCBI) strong 31 90
  Desulfovibrio vulgaris Hildenborough JW710 DVU1685 conserved hypothetical protein TIGR00046 (TIGR) insig. 28 98
  Mycobacterium tuberculosis H37Rv Rv2372c Conserved hypothetical protein insig. 28 91
  Desulfovibrio vulgaris Miyazaki F DvMF_0340 16S ribosomal RNA methyltransferase RsmE (RefSeq) insig. 28 87
  Pseudomonas sp. DMC3 GFF3068 hypothetical protein no data 30 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1570 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) strong 30 70
  Pseudomonas segetis P6 ACVTMO_RS21155 16S rRNA (uracil(1498)-N(3))-methyltransferase no data 30 57
  Pseudomonas aeruginosa MRSN321 DY961_RS11185 16S rRNA (uracil(1498)-N(3))-methyltransferase no data 28 73
  Pseudomonas aeruginosa PA14 IKLFDK_28170 16S rRNA (uracil(1498)-N(3))-methyltransferase strong 28 73
  Pseudomonas aeruginosa PUPa3 DQ20_RS50900 16S rRNA (uracil(1498)-N(3))-methyltransferase no data 28 73
  Pseudomonas fluorescens GW456-L13 PfGW456L13_307 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) no data 29 67
  Pseudomonas sp. RS175 PFR28_04981 hypothetical protein no data 30 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3787 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) no data 30 67
  Pseudomonas fluorescens FW300-N2C3 AO356_09545 16S rRNA methyltransferase no data 29 67
  Pseudomonas putida KT2440 PP_5019 Ribosomal RNA small subunit methyltransferase E no data 26 70
  Acinetobacter baumannii LAC-4 RR41_RS00950 16S rRNA (uracil(1498)-N(3))-methyltransferase insig. 24 81
  Pseudomonas stutzeri RCH2 Psest_3948 RNA methyltransferase, RsmE family no data 31 55
  Pseudomonas sp. BP01 JOY50_RS09595 16S rRNA (uracil(1498)-N(3))-methyltransferase cofit 26 77
  Pseudomonas protegens RBAN4 FABNJH_02190 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 27 70
  Pseudomonas fluorescens FW300-N2E3 AO353_12340 16S rRNA methyltransferase no data 33 42
  Marinobacter adhaerens HP15 HP15_3199 ribosomal RNA small subunit methyltransferase E no data 27 86
  Pseudomonas sp. SVBP6 COO64_RS13475 16S rRNA (uracil(1498)-N(3))-methyltransferase no data 27 67
  Acinetobacter radioresistens SK82 MPMX26_02909 Ribosomal RNA small subunit methyltransferase E insig. 22 81
  Pseudomonas fluorescens SBW25 PFLU_RS01875 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 32 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01875 16S rRNA (uracil(1498)-N(3))-methyltransferase sig. 32 39
  Pseudomonas sp. S08-1 OH686_10185 Uncharacterized methyltransferase no data 32 45
  Pseudomonas syringae pv. syringae B728a Psyr_0381 Conserved hypothetical protein 46 no data 34 39
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0381 Conserved hypothetical protein 46 no data 34 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00589 hypothetical protein no data 31 39