Homologs of GFF1895 from Sphingobium sp. HT1-2

DNA repair protein RadA
SEED: DNA repair protein RadA
KEGG: DNA repair protein RadA/Sms

214 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF1895 DNA repair protein RadA cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0751 DNA repair protein RadA strong 77 100
o Rhizobium sp. OAE497 ABIE40_RS06280 DNA repair protein RadA insig. 61 96
o Agrobacterium fabrum C58 Atu1077 DNA repair protein strong 62 95
o Azospirillum sp. SherDot2 MPMX19_00904 DNA repair protein RadA sig. 63 98
o Sinorhizobium meliloti 1021 SMc00556 DNA repair protein RadA strong 61 95
o Azospirillum brasilense Sp245 AZOBR_RS08320 DNA repair protein RadA strong 64 94
o Rhodopseudomonas palustris CGA009 TX73_015980 DNA repair protein RadA insig. 59 100
o Magnetospirillum magneticum AMB-1 AMB_RS10555 DNA repair protein RadA insig. 63 94
o Dinoroseobacter shibae DFL-12 Dshi_2129 DNA repair protein RadA (RefSeq) strong 58 100
o Rhodospirillum rubrum S1H Rru_A0406 DNA repair protein RadA (NCBI) strong 62 95
o Xanthobacter sp. DMC5 GFF1870 DNA repair protein RadA insig. 59 98
o Phaeobacter inhibens DSM 17395 PGA1_c10840 DNA repair protein RadA strong 59 99
o Bosea sp. OAE506 ABIE41_RS17800 DNA repair protein RadA strong 60 94
o Caulobacter crescentus NA1000 CCNA_01732 DNA repair protein RadA strong 57 99
o Caulobacter crescentus NA1000 Δfur CCNA_01732 DNA repair protein RadA cofit 57 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03745 DNA repair protein RadA insig. 54 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0877 DNA replication and repair protein RadA strong 49 98
o Variovorax sp. OAS795 ABID97_RS03770 DNA repair protein RadA insig. 48 99
o Variovorax sp. SCN45 GFF5087 DNA repair protein RadA insig. 48 99
o Pseudomonas simiae WCS417 PS417_24305 DNA repair protein RadA strong 49 99
o Pseudomonas aeruginosa MRSN321 DY961_RS23385 radA;go_function=ATP DNA repair protein RadA sig. 49 99
o Pseudomonas aeruginosa PA14 IKLFDK_00465 DNA repair protein RadA strong 49 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS55850 radA;go_function=ATP DNA repair protein RadA sig. 49 99
o Pseudomonas fluorescens SBW25 PFLU_RS26230 DNA repair protein RadA insig. 49 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26230 DNA repair protein RadA insig. 49 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05014 DNA repair protein RadA cofit 49 99
o Pseudomonas orientalis W4I3 QF045_RS26600 DNA repair protein RadA insig. 49 99
o Pseudomonas syringae pv. syringae B728a Psyr_4275 DNA replication and repair protein RadA insig. 48 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4275 DNA replication and repair protein RadA insig. 48 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2768 DNA repair protein RadA sig. 48 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1442 DNA repair protein RadA insig. 48 99
o Pseudomonas fluorescens FW300-N2C3 AO356_15680 DNA repair protein RadA strong 48 99
o Pseudomonas protegens RBAN4 FABNJH_27060 radA DNA repair protein RadA insig. 48 99
o Pseudomonas fluorescens FW300-N2E3 AO353_13980 DNA repair protein RadA strong 48 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5076 DNA repair protein RadA strong 48 99
o Pseudomonas sp. RS175 PFR28_03792 DNA repair protein RadA insig. 48 99
o Pseudomonas sp. DMC3 GFF3954 DNA repair protein RadA cofit 48 99
o Acinetobacter radioresistens SK82 MPMX26_02235 DNA repair protein RadA insig. 49 95
o Pseudomonas segetis P6 ACVTMO_RS19740 radA DNA repair protein RadA insig. 48 99
o Pseudomonas sp. SVBP6 COO64_RS02920 radA DNA repair protein RadA insig. 48 99
o Klebsiella michiganensis M5al BWI76_RS04165 DNA repair protein RadA insig. 47 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1057 DNA repair protein RadA insig. 49 98
o Pseudomonas sp. S08-1 OH686_16185 DNA repair protein RadA insig. 48 99
o Serratia liquefaciens MT49 IAI46_02945 DNA repair protein RadA insig. 48 99
o Escherichia coli BW25113 b4389 radA predicted repair protein (NCBI) strong 48 98
o Escherichia coli BL21 ECD_04265 DNA repair protein strong 48 98
o Escherichia fergusonii Becca EFB2_04057 DNA repair protein RadA insig. 48 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03672 DNA repair protein RadA insig. 48 98
o Escherichia coli Nissle 1917 ECOLIN_RS25190 DNA repair protein RadA insig. 48 98
o Klebsiella pneumoniae MKP103 KDGMDA_12435 DNA repair protein RadA sig. 47 98
o Klebsiella pneumoniae MRSN742743 KFA93_RS10955 radA;go_function=damaged DNA repair protein RadA insig. 47 98
o Enterobacter asburiae PDN3 EX28DRAFT_3597 DNA repair protein RadA insig. 48 99
o Erwinia amylovora T8 OLJFJH_01590 DNA repair protein RadA insig. 49 94
o Enterobacter sp. TBS_079 MPMX20_00694 DNA repair protein RadA insig. 48 99
o Escherichia coli ECOR38 HEPCGN_09195 radA DNA repair protein RadA insig. 47 98
o Rahnella sp. WP5 EX31_RS04030 DNA repair protein RadA insig. 48 98
o Escherichia coli ECOR27 NOLOHH_03520 radA DNA repair protein RadA insig. 47 98
o Escherichia coli ECRC100 OKFHMN_11195 radA DNA repair protein RadA cofit 47 98
o Escherichia coli ECRC101 MCAODC_01710 radA DNA repair protein RadA insig. 47 98
o Escherichia coli ECRC102 NIAGMN_09045 radA DNA repair protein RadA cofit 47 98
o Escherichia coli ECRC62 BNILDI_08075 radA DNA repair protein RadA insig. 47 98
o Escherichia coli ECRC98 JDDGAC_14790 radA DNA repair protein RadA insig. 47 98
o Escherichia coli ECRC99 KEDOAH_16960 radA DNA repair protein RadA no data 47 98
o Pseudomonas stutzeri RCH2 Psest_3401 DNA repair protein RadA strong 48 99
o Pseudomonas sp. BP01 JOY50_RS15685 radA DNA repair protein RadA insig. 47 99
o Pseudomonas putida KT2440 PP_4644 DNA repair enzyme insig. 47 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1031 DNA repair protein RadA strong 47 97
o Erwinia tracheiphila SCR3 LU632_RS02550 radA DNA repair protein RadA insig. 48 98
o Pantoea sp. MT58 IAI47_16345 DNA repair protein RadA insig. 48 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS16655 radA DNA repair protein RadA cofit 48 98
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_06365 radA DNA repair protein RadA cofit 47 98
o Methylophilus sp. DMC18 GFF1046 DNA repair protein RadA insig. 46 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08845 DNA repair protein RadA strong 47 99
o Rhodanobacter denitrificans MT42 LRK55_RS02280 DNA repair protein RadA cofit 47 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02525 DNA repair protein RadA insig. 47 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20495 DNA repair protein RadA insig. 43 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS08395 DNA repair protein RadA cofit 46 95
o Cupriavidus basilensis FW507-4G11 RR42_RS12030 DNA repair protein RadA no data 48 99
o Acinetobacter baumannii LAC-4 RR41_RS04415 DNA repair protein RadA insig. 46 96
o Acidovorax sp. GW101-3H11 Ac3H11_3371 DNA repair protein RadA strong 48 100
o Rhodanobacter sp. FW510-T8 OKGIIK_09580 radA DNA repair protein RadA sig. 47 99
o Cellulophaga baltica 18 M666_RS03595 DNA repair protein RadA insig. 44 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07420 DNA repair protein RadA insig. 47 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3812.1 DNA repair protein RadA insig. 47 99
o Burkholderia phytofirmans PsJN BPHYT_RS12235 DNA repair protein RadA strong 47 99
o Alteromonas macleodii MIT1002 MIT1002_02706 Lon protease 2 insig. 45 99
o Marinobacter adhaerens HP15 HP15_487 DNA repair protein RadA strong 50 95
o Castellaniella sp019104865 MT123 ABCV34_RS02345 DNA repair protein RadA sig. 50 94
o Paraburkholderia graminis OAS925 ABIE53_002526 DNA repair protein RadA/Sms sig. 47 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17125 DNA repair protein RadA cofit 42 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00590 DNA replication and repair protein RadA insig. 47 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22660 DNA repair protein RadA sig. 46 95
o Dickeya dadantii 3937 DDA3937_RS02420 DNA repair protein RadA insig. 48 94
o Synechocystis sp000284455 PCC 6803 SGL_RS11815 DNA repair protein RadA insig. 45 98
o Shewanella sp. ANA-3 Shewana3_1049 DNA repair protein RadA (RefSeq) insig. 48 94
o Herbaspirillum seropedicae SmR1 HSERO_RS10745 DNA repair protein RadA strong 48 96
o Pectobacterium carotovorum WPP14 HER17_RS19085 DNA repair protein RadA cofit 48 94
o Shewanella oneidensis MR-1 SO1226 radA DNA repair protein RadA (NCBI ptt file) strong 48 94
o Dickeya dianthicola ME23 DZA65_RS02485 DNA repair protein RadA insig. 48 94
o Lysobacter sp. OAE881 ABIE51_RS07685 DNA repair protein RadA insig. 48 94
o Dickeya dianthicola 67-19 HGI48_RS02380 DNA repair protein RadA insig. 48 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS06320 DNA repair protein RadA cofit 46 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_11870 DNA repair protein RadA cofit 46 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1833 DNA repair protein RadA insig. 49 94
o Desulfovibrio vulgaris Hildenborough JW710 DVU1590 radA DNA repair protein RadA (TIGR) insig. 47 94
o Bacteroides thetaiotaomicron VPI-5482 BT2406 putative DNA repair protein (NCBI ptt file) strong 44 95
o Shewanella amazonensis SB2B Sama_0981 DNA repair protein RadA (RefSeq) strong 47 98
o Bacteroides stercoris CC31F HMPREF1181_RS00075 DNA repair protein RadA insig. 44 95
o Ralstonia solanacearum PSI07 RPSI07_RS17270 DNA repair protein RadA strong 47 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS11670 DNA repair protein RadA insig. 46 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00210 DNA repair protein RadA insig. 47 100
o Ralstonia solanacearum UW163 UW163_RS13540 DNA repair protein RadA insig. 47 100
o Phocaeicola dorei CL03T12C01 ABI39_RS10420 DNA repair protein RadA insig. 44 95
o Ralstonia solanacearum GMI1000 RS_RS06880 DNA repair protein RadA strong 47 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14715 DNA repair protein RadA sig. 43 95
o Bacteroides ovatus ATCC 8483 BACOVA_03019 DNA repair protein RadA cofit 43 95
o Synechococcus elongatus PCC 7942 Synpcc7942_1452 radA DNA repair protein RadA sig. 47 94
o Dechlorosoma suillum PS Dsui_2413 DNA repair protein RadA cofit 47 99
o Desulfovibrio vulgaris Miyazaki F DvMF_0471 DNA repair protein RadA (RefSeq) sig. 42 99
o Mycobacterium tuberculosis H37Rv Rv3585 DNA repair protein RadA (DNA repair protein SMS) sig. 45 93
o Bifidobacterium breve UCC2003 BBR_RS18740 DNA repair protein RadA strong 42 94
o Fusobacterium nucleatum SB010 HUW76_02270 DNA repair protein RadA strong 39 93
o Shewanella loihica PV-4 Shew_2807 DNA repair protein RadA (RefSeq) strong 36 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS39485 gas vesicle protein GvpD insig. 28 38
  Variovorax sp. OAS795 ABID97_RS10010 ATPase domain-containing protein insig. 29 52
  Pseudomonas stutzeri RCH2 Psest_1407 RecA-superfamily ATPases implicated in signal transduction sig. 29 31
  Synechocystis sp000284455 PCC 6803 SGL_RS08835 circadian clock protein KaiC sig. 24 56
  Paraburkholderia graminis OAS925 ABIE53_004941 circadian clock protein KaiC sig. 25 47
  Synechococcus elongatus PCC 7942 Synpcc7942_1391 comM Mg chelatase-related protein insig. 34 23
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3195.1 RecA-superfamily ATPases implicated in signal transduction insig. 28 47
  Azospirillum sp. SherDot2 MPMX19_03580 Circadian clock protein kinase KaiC insig. 27 37
  Agrobacterium fabrum C58 Atu5510 hypothetical protein insig. 27 44
  Rhodopseudomonas palustris CGA009 TX73_022465 DNA helicase insig. 29 32
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03889 circadian clock protein KaiC insig. 24 44
  Lysobacter sp. OAE881 ABIE51_RS09910 ATPase domain-containing protein insig. 39 16
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01737 circadian clock protein KaiC insig. 28 42
  Burkholderia phytofirmans PsJN BPHYT_RS32765 circadian clock protein KaiC insig. 25 31
  Rhizobium sp. OAE497 ABIE40_RS28095 ATPase domain-containing protein insig. 37 16
  Pseudomonas sp. SVBP6 COO64_RS23035 ATPase domain-containing protein insig. 35 19
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01737 circadian clock protein KaiC insig. 25 41
  Pantoea sp. MT58 IAI47_04300 recombinase RecA strong 31 37
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS04670 recA recombinase RecA strong 31 37
  Synechocystis sp000284455 PCC 6803 SGL_RS18280 recombinase RecA no data 32 31
  Rhizobium sp. OAE497 ABIE40_RS28915 ATPase domain-containing protein cofit 46 13
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01625 recA recombinase RecA no data 31 37
  Erwinia tracheiphila SCR3 LU632_RS15735 recA recombinase RecA no data 31 37
  Erwinia amylovora T8 OLJFJH_09575 recombinase RecA sig. 31 37
  Enterobacter asburiae PDN3 EX28DRAFT_2785 protein RecA no data 30 37
  Enterobacter sp. TBS_079 MPMX20_03580 Protein RecA strong 30 37
  Klebsiella michiganensis M5al BWI76_RS22180 recombinase RecA no data 30 37
  Klebsiella pneumoniae MKP103 KDGMDA_02850 recombinase RecA sig. 30 37
  Klebsiella pneumoniae MRSN742743 KFA93_RS18955 recA;go_function=DNA recombinase RecA no data 30 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4693 RecA protein no data 30 37
  Escherichia coli BL21 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor strong 29 37
  Escherichia fergusonii Becca EFB2_01225 Protein RecA strong 29 37
  Escherichia coli ECOR27 NOLOHH_12545 recA recombinase RecA sig. 29 37
  Escherichia coli ECOR38 HEPCGN_19900 recA recombinase RecA strong 29 37
  Escherichia coli ECRC100 OKFHMN_20705 recA recombinase RecA no data 29 37
  Escherichia coli ECRC101 MCAODC_11230 recA recombinase RecA insig. 29 37
  Escherichia coli ECRC102 NIAGMN_18475 recA recombinase RecA no data 29 37
  Escherichia coli ECRC62 BNILDI_11105 recA recombinase RecA cofit 29 37
  Escherichia coli ECRC98 JDDGAC_24370 recA recombinase RecA no data 29 37
  Escherichia coli ECRC99 KEDOAH_07430 recA recombinase RecA no data 29 37
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01035 Protein RecA insig. 29 37
  Escherichia coli Nissle 1917 ECOLIN_RS15060 recombinase RecA no data 29 37
  Escherichia coli BW25113 b2699 recA recombinase A (NCBI) sig. 29 37
  Rhodospirillum rubrum S1H Rru_A2542 circadian clock protein KaiC (NCBI) sig. 23 44
  Ralstonia sp. UNC404CL21Col ABZR87_RS12785 endopeptidase La strong 29 25
  Pseudomonas syringae pv. syringae B728a Psyr_2451 KaiC insig. 41 16
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2451 KaiC insig. 41 16
  Pectobacterium carotovorum WPP14 HER17_RS05045 recombinase RecA strong 30 37
  Rhizobium sp. OAE497 ABIE40_RS27345 ATPase domain-containing protein insig. 27 37
  Desulfovibrio vulgaris Hildenborough JW710 DVU3303 lon ATP-dependent protease La, truncation (TIGR) cofit 30 20
  Pseudomonas sp. DMC3 GFF3552 Circadian clock protein kinase KaiC insig. 33 19
  Pseudomonas orientalis W4I3 QF045_RS16070 ATPase domain-containing protein cofit 28 36
  Azospirillum brasilense Sp245 AZOBR_RS32590 circadian clock protein KaiC insig. 25 48
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_821 KaiC insig. 47 13
  Desulfovibrio vulgaris Hildenborough JW710 DVU1090 recA recA protein (TIGR) insig. 32 40
  Lysobacter sp. OAE881 ABIE51_RS14145 endopeptidase La sig. 30 25
  Shewanella sp. ANA-3 Shewana3_1126 recA recombinase A (RefSeq) strong 30 37
  Shewanella oneidensis MR-1 SO3430 recA recA protein (NCBI ptt file) strong 30 37
  Ralstonia solanacearum GMI1000 RS_RS08655 endopeptidase La no data 30 21
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02963 Circadian clock protein kinase KaiC cofit 28 36
  Agrobacterium fabrum C58 Atu5086 hypothetical protein insig. 36 16
  Pseudomonas simiae WCS417 PS417_13875 circadian clock protein KaiC insig. 27 36
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3054 KaiC insig. 26 38
  Paraburkholderia sabiae LMG 24235 QEN71_RS39485 gas vesicle protein GvpD insig. 39 15
  Desulfovibrio vulgaris Hildenborough JW710 DVU1191 lon ATP-dependent protease La, putative (TIGR) strong 28 22
  Pseudomonas stutzeri RCH2 Psest_1407 RecA-superfamily ATPases implicated in signal transduction sig. 36 16
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3195.1 RecA-superfamily ATPases implicated in signal transduction insig. 36 16
  Dickeya dadantii 3937 DDA3937_RS16245 recombinase RecA insig. 30 37
  Acinetobacter baumannii LAC-4 RR41_RS08110 recombinase RecA no data 30 37
  Ralstonia solanacearum PSI07 RPSI07_RS16135 endopeptidase La no data 30 21
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01340 endopeptidase La no data 29 25
  Ralstonia solanacearum UW163 UW163_RS14650 endopeptidase La no data 29 25
  Mycobacterium tuberculosis H37Rv Rv2897c Conserved hypothetical protein insig. 35 18
  Rhizobium sp. OAE497 ABIE40_RS10320 recombinase RecA strong 30 34
  Desulfovibrio vulgaris Miyazaki F DvMF_2107 response regulator receiver protein (RefSeq) strong 44 12
  Pseudomonas sp. BP01 JOY50_RS04050 ATPase domain-containing protein insig. 36 17
  Pseudomonas putida KT2440 PP_3834 conserved protein of unknown function sig. 30 29
  Dickeya dianthicola 67-19 HGI48_RS16355 recombinase RecA insig. 30 37
  Dickeya dianthicola ME23 DZA65_RS17450 recombinase RecA no data 30 37
  Acinetobacter radioresistens SK82 MPMX26_01308 Protein RecA strong 30 37
  Paraburkholderia graminis OAS925 ABIE53_002117 ATP-dependent Lon protease strong 28 24
  Lysobacter sp. OAE881 ABIE51_RS09910 ATPase domain-containing protein insig. 38 16
  Sinorhizobium meliloti 1021 SMc00760 recombinase A strong 31 34
  Serratia liquefaciens MT49 IAI46_03840 recombinase RecA sig. 30 37
  Shewanella amazonensis SB2B Sama_1046 recA recombinase A (RefSeq) strong 30 37
  Rahnella sp. WP5 EX31_RS07800 recombinase RecA sig. 30 37
  Pseudomonas sp. DMC3 GFF2884 Circadian clock protein kinase KaiC cofit 28 36
  Rhizobium sp. OAE497 ABIE40_RS27365 ATPase domain-containing protein cofit 36 12
  Burkholderia phytofirmans PsJN BPHYT_RS09460 peptidase no data 28 24
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 no data 28 24