Homologs of GFF1640 from Sphingobium sp. HT1-2

ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
SEED: ATP-dependent DNA helicase UvrD/PcrA
KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) insig. 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0249 Superfamily I DNA and RNA helicases strong 80 100
o Agrobacterium fabrum C58 Atu2057 DNA helicase II sig. 60 98
o Bosea sp. OAE506 ABIE41_RS12730 UvrD-helicase domain-containing protein insig. 60 98
o Azospirillum brasilense Sp245 AZOBR_RS12445 DNA helicase II insig. 60 98
o Phaeobacter inhibens DSM 17395 PGA1_c09450 DNA helicase II UvrD strong 61 98
o Rhizobium sp. OAE497 ABIE40_RS11670 UvrD-helicase domain-containing protein sig. 58 98
o Sinorhizobium meliloti 1021 SMc01461 DNA helicase II protein strong 56 98
o Xanthobacter sp. DMC5 GFF3566 ATP-dependent DNA helicase PcrA insig. 58 99
o Rhodopseudomonas palustris CGA009 TX73_018165 UvrD-helicase domain-containing protein sig. 57 98
o Azospirillum sp. SherDot2 MPMX19_01610 ATP-dependent DNA helicase PcrA insig. 59 98
o Caulobacter crescentus NA1000 CCNA_01596 DNA helicase II strong 58 98
o Caulobacter crescentus NA1000 Δfur CCNA_01596 DNA helicase II cofit 58 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04960 UvrD-helicase domain-containing protein insig. 59 99
o Magnetospirillum magneticum AMB-1 AMB_RS03725 DNA helicase II strong 56 99
o Dinoroseobacter shibae DFL-12 Dshi_2483 UvrD/REP helicase (RefSeq) no data 57 98
o Rhodospirillum rubrum S1H Rru_A1536 UvrD/REP helicase (NCBI) strong 57 99
o Shewanella oneidensis MR-1 SO0467 uvrD DNA helicase II (NCBI ptt file) strong 41 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_01015 DNA helicase II strong 41 99
o Shewanella sp. ANA-3 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) strong 41 98
o Shewanella loihica PV-4 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) strong 41 98
o Shewanella amazonensis SB2B Sama_0419 uvrD DNA-dependent helicase II (RefSeq) strong 41 98
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08770 uvrD DNA helicase II no data 42 98
o Erwinia tracheiphila SCR3 LU632_RS24125 uvrD DNA helicase II no data 42 98
o Pseudomonas aeruginosa PA14 IKLFDK_26200 DNA helicase II sig. 41 97
o Pectobacterium carotovorum WPP14 HER17_RS01360 DNA helicase II cofit 42 98
o Escherichia coli ECOR38 HEPCGN_13115 uvrD DNA helicase II cofit 41 98
o Serratia liquefaciens MT49 IAI46_00735 DNA helicase II strong 42 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS57955 uvrD;go_function=DNA DNA helicase II insig. 41 97
o Pseudomonas aeruginosa MRSN321 DY961_RS25505 uvrD;go_function=DNA DNA helicase II strong 41 97
o Klebsiella pneumoniae MKP103 KDGMDA_09710 DNA helicase II sig. 41 98
o Dickeya dadantii 3937 DDA3937_RS19880 DNA helicase II strong 42 98
o Escherichia coli BL21 ECD_03689 DNA-dependent ATPase I and helicase II no data 41 98
o Escherichia fergusonii Becca EFB2_04824 DNA helicase II strong 41 98
o Escherichia coli ECOR27 NOLOHH_06540 uvrD DNA helicase II cofit 41 98
o Escherichia coli ECRC100 OKFHMN_14410 uvrD DNA helicase II sig. 41 98
o Escherichia coli ECRC101 MCAODC_04915 uvrD DNA helicase II strong 41 98
o Escherichia coli ECRC102 NIAGMN_12165 uvrD DNA helicase II strong 41 98
o Escherichia coli ECRC62 BNILDI_04995 uvrD DNA helicase II insig. 41 98
o Escherichia coli ECRC98 JDDGAC_18035 uvrD DNA helicase II sig. 41 98
o Escherichia coli ECRC99 KEDOAH_13740 uvrD DNA helicase II no data 41 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04237 DNA helicase II strong 41 98
o Escherichia coli Nissle 1917 ECOLIN_RS21885 DNA helicase II cofit 41 98
o Escherichia coli BW25113 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) strong 41 98
o Enterobacter asburiae PDN3 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) insig. 41 98
o Klebsiella michiganensis M5al BWI76_RS01220 DNA-dependent helicase II strong 41 98
o Enterobacter sp. TBS_079 MPMX20_04463 DNA helicase II strong 41 98
o Pseudomonas fluorescens FW300-N2E3 AO353_10055 DNA helicase II strong 41 97
o Pseudomonas putida KT2440 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex strong 41 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF241 ATP-dependent DNA helicase UvrD/PcrA strong 41 98
o Pseudomonas sp. BP01 JOY50_RS08735 uvrD DNA helicase II insig. 40 97
o Pseudomonas syringae pv. syringae B728a Psyr_5065 ATP-dependent DNA helicase UvrD strong 40 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5065 ATP-dependent DNA helicase UvrD strong 40 97
o Dickeya dianthicola ME23 DZA65_RS21080 DNA helicase II sig. 41 98
o Dickeya dianthicola 67-19 HGI48_RS20035 DNA helicase II sig. 41 98
o Pseudomonas sp. RS175 PFR28_04523 DNA helicase II sig. 41 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA sig. 41 97
o Pseudomonas fluorescens SBW25 PFLU_RS29900 DNA helicase II cofit 41 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29900 DNA helicase II strong 41 97
o Pseudomonas segetis P6 MPMX49_00180 DNA helicase II strong 41 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA insig. 44 82
o Pseudomonas stutzeri RCH2 Psest_4098 Superfamily I DNA and RNA helicases strong 41 97
o Pseudomonas sp. S08-1 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA insig. 41 99
o Pseudomonas orientalis W4I3 QF045_RS02600 DNA helicase II cofit 41 97
o Pseudomonas sp. SVBP6 COO64_RS01845 uvrD DNA helicase II strong 40 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA strong 40 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0238 Superfamily I DNA and RNA helicases strong 40 98
o Pseudomonas sp. DMC3 GFF512 DNA helicase II cofit 41 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00116 DNA helicase II cofit 40 97
o Pseudomonas fluorescens FW300-N2C3 AO356_11990 DNA helicase II strong 40 97
o Marinobacter adhaerens HP15 HP15_3403 UvrD/REP helicase strong 40 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15370 DNA helicase II cofit 41 98
o Rhodanobacter denitrificans MT42 LRK55_RS06595 DNA helicase II no data 41 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS06850 DNA helicase II sig. 41 98
o Pantoea sp. MT58 IAI47_18390 DNA helicase II insig. 41 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS16965 DNA helicase II strong 42 98
o Rahnella sp. WP5 EX31_RS15175 DNA helicase II insig. 41 98
o Methylophilus sp. DMC18 GFF1664 DNA helicase II cofit 39 98
o Alteromonas macleodii MIT1002 MIT1002_00153 DNA helicase II sig. 40 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0292 Superfamily I DNA and RNA helicases no data 38 98
o Lysobacter sp. OAE881 ABIE51_RS01985 DNA helicase II strong 40 98
o Erwinia amylovora T8 OLJFJH_06425 DNA helicase II sig. 41 98
o Rhodanobacter sp. FW510-T8 OKGIIK_16775 DNA helicase cofit 40 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS01560 UvrD-helicase domain-containing protein no data 38 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA sig. 40 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07840 ATP-dependent helicase no data 36 98
o Mycobacterium tuberculosis H37Rv Rv0949 Probable ATP-dependent DNA helicase II UvrD1 insig. 38 99
o Dechlorosoma suillum PS Dsui_1227 DNA/RNA helicase, superfamily I strong 39 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12980 ATP-dependent DNA helicase no data 37 98
o Burkholderia phytofirmans PsJN BPHYT_RS13840 DNA-dependent helicase no data 39 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04469 ATP-dependent DNA helicase UvrD no data 39 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS03560 3'-5' exonuclease strong 36 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS05110 3'-5' exonuclease no data 38 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07795 ATP-dependent DNA helicase no data 37 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5598 ATP-dependent DNA helicase UvrD/PcrA no data 37 98
o Variovorax sp. SCN45 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) cofit 38 97
o Cupriavidus basilensis FW507-4G11 RR42_RS15090 DNA helicase strong 37 98
o Acidovorax sp. GW101-3H11 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA insig. 37 95
o Paraburkholderia graminis OAS925 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA no data 38 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS15705 UvrD-helicase domain-containing protein sig. 38 97