Homologs of Psest_1639 from Pseudomonas stutzeri RCH2

23S rRNA (uracil-5-)-methyltransferase RumA
KEGG: RNA methyltransferase, TrmA family

244 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA insig. 100 100
o Pseudomonas sp. DMC3 GFF4819 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 67 100
o Pseudomonas segetis P6 ACVTMO_RS08190 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 69 100
o Pseudomonas aeruginosa MRSN321 DY961_RS07780 rlmD;go_function=RNA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 68 100
o Pseudomonas aeruginosa PA14 IKLFDK_04195 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 68 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS45015 rlmD;go_function=RNA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 68 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 strong 69 100
o Pseudomonas fluorescens SBW25 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 68 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 68 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 strong 69 100
o Pseudomonas fluorescens FW300-N2C3 AO356_19055 23S rRNA methyltransferase insig. 68 100
o Pseudomonas sp. S08-1 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA cofit 68 99
o Pseudomonas fluorescens FW300-N2E3 AO353_02715 23S rRNA methyltransferase sig. 69 100
o Pseudomonas simiae WCS417 PS417_20155 23S rRNA methyltransferase insig. 67 100
o Pseudomonas putida KT2440 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 69 100
o Pseudomonas sp. SVBP6 COO64_RS07330 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 67 100
o Pseudomonas sp. BP01 JOY50_RS23905 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 69 100
o Pseudomonas sp. RS175 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 67 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 sig. 67 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 66 100
o Pseudomonas syringae pv. syringae B728a Psyr_3696 23S rRNA m(5)U-1939 methyltransferase insig. 65 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3696 23S rRNA m(5)U-1939 methyltransferase insig. 65 100
o Marinobacter adhaerens HP15 HP15_790 23S rRNA 5-methyluridine methyltransferase insig. 46 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_12410 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 46 97
o Acinetobacter baumannii LAC-4 RR41_RS16085 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 45 96
o Acinetobacter radioresistens SK82 MPMX26_00538 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 43 94
o Shewanella oneidensis MR-1 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) strong 44 95
o Shewanella loihica PV-4 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) cofit 43 94
o Shewanella amazonensis SB2B Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) sig. 45 95
o Shewanella sp. ANA-3 Shewana3_1110 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) cofit 44 95
o Serratia liquefaciens MT49 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 43 94
o Kangiella aquimarina DSM 16071 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA insig. 40 94
o Escherichia fergusonii Becca EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Escherichia coli Nissle 1917 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Escherichia coli ECOR27 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Escherichia coli ECRC100 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 42 94
o Escherichia coli ECRC101 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Escherichia coli ECRC102 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Escherichia coli ECRC98 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Escherichia coli ECRC99 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no data 42 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3669.1 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) insig. 43 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Escherichia coli BW25113 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) insig. 42 94
o Escherichia coli ECOR38 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 94
o Pectobacterium carotovorum WPP14 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 43 94
o Escherichia coli ECRC62 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 42 94
o Klebsiella michiganensis M5al BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase sig. 43 92
o Klebsiella pneumoniae MKP103 KDGMDA_03340 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 43 92
o Klebsiella pneumoniae MRSN742743 KFA93_RS18420 rlmD;go_function=RNA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 43 92
o Escherichia coli BL21 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent insig. 42 94
o Enterobacter asburiae PDN3 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA insig. 41 95
o Pantoea sp. MT58 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 41 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16855 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 41 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) insig. 42 94
o Enterobacter sp. TBS_079 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 41 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_17370 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 39 94
o Erwinia tracheiphila SCR3 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 39 94
o Dickeya dadantii 3937 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 42 96
o Rahnella sp. WP5 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 91
o Erwinia amylovora T8 OLJFJH_09240 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 40 96
o Dickeya dianthicola ME23 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07120 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 44 95
o Methylophilus sp. DMC18 GFF916 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 40 94
o Castellaniella sp019104865 MT123 ABCV34_RS03050 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 44 93
o Dickeya dianthicola 67-19 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 40 96
o Lysobacter sp. OAE881 ABIE51_RS13830 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 40 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00846 23S rRNA m(5)U-1939 methyltransferase insig. 39 95
o Rhodanobacter denitrificans MT42 LRK55_RS16715 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 93
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS11940 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 41 93
o Burkholderia phytofirmans PsJN BPHYT_RS09125 23S rRNA methyltransferase insig. 38 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS17000 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 41 93
o Dechlorosoma suillum PS Dsui_1981 23S rRNA (uracil-5-)-methyltransferase RumA cofit 40 95
o Rhodanobacter sp. FW510-T8 OKGIIK_07840 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 42 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS22225 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 39 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15245 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 38 97
o Ralstonia solanacearum UW163 UW163_RS12710 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 38 97
o Cupriavidus basilensis FW507-4G11 RR42_RS13170 23S rRNA methyltransferase insig. 39 90
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3883 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) insig. 38 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS10885 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 38 94
o Ralstonia solanacearum GMI1000 RS_RS06055 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 39 94
o Ralstonia solanacearum PSI07 RPSI07_RS18130 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 38 94
o Alteromonas macleodii MIT1002 MIT1002_00793 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 36 94
o Variovorax sp. SCN45 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) cofit 37 93
o Herbaspirillum seropedicae SmR1 HSERO_RS14825 23S rRNA methyltransferase insig. 37 93
o Acidovorax sp. GW101-3H11 Ac3H11_2847 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) insig. 36 94
  Paraburkholderia graminis OAS925 ABIE53_002060 tRNA/tmRNA/rRNA uracil-C5-methylase (TrmA/RlmC/RlmD family) sig. 39 64
  Synechococcus elongatus PCC 7942 Synpcc7942_0241 rumA 23S rRNA (uracil-5-)-methyltransferase RumA cofit 33 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0172 23S rRNA (uracil-5-)-methyltransferase RumA insig. 28 93
  Magnetospirillum magneticum AMB-1 AMB_RS01660 class I SAM-dependent RNA methyltransferase insig. 34 94
  Synechocystis sp000284455 PCC 6803 SGL_RS06135 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 28 94
  Desulfovibrio vulgaris Hildenborough JW710 DVU0924 rumA 23S rRNA (uracil-5-)-methyltransferase RumA (TIGR) insig. 28 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02005 23S rRNA (uracil-5-)-methyltransferase RumA insig. 27 94
  Fusobacterium nucleatum SB010 HUW76_01255 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 22 92
  Rhizobium sp. OAE497 ABIE40_RS03880 class I SAM-dependent RNA methyltransferase insig. 33 94
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25340 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 27 93
  Bacteroides ovatus ATCC 8483 BACOVA_02267 23S rRNA (uracil-5-)-methyltransferase RumA cofit 26 96
  Agrobacterium fabrum C58 Atu0735 RNA methyltransferase insig. 32 94
  Azospirillum sp. SherDot2 MPMX19_02196 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 33 100
  Cellulophaga baltica 18 M666_RS10255 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 26 90
  Sinorhizobium meliloti 1021 SMc00974 RNA methyltransferase insig. 32 94
  Bacteroides thetaiotaomicron VPI-5482 BT0643 RNA methyltransferase (NCBI ptt file) sig. 27 92
  Rhodopseudomonas palustris CGA009 TX73_004885 methyltransferase insig. 31 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21250 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 27 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03720 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD strong 26 96
  Phocaeicola dorei CL03T12C01 ABI39_RS17490 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 24 96
  Rhodospirillum rubrum S1H Rru_A2107 23S rRNA (uracil-5-)-methyltransferase RumA (NCBI) no data 32 90
  Azospirillum brasilense Sp245 AZOBR_RS01195 RNA methyltransferase insig. 31 94
  Bacteroides stercoris CC31F HMPREF1181_RS16525 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD sig. 25 94
  Xanthobacter sp. DMC5 GFF893 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD insig. 32 94
  Phaeobacter inhibens DSM 17395 PGA1_c34810 putative RNA methyltransferase insig. 31 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC cofit 28 78
  Caulobacter crescentus NA1000 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein sig. 29 94
  Caulobacter crescentus NA1000 Δfur CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein cofit 29 94
  Shewanella amazonensis SB2B Sama_0630 rumB 23S rRNA methyluridine methyltransferase (RefSeq) insig. 28 78
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0648 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase insig. 32 82
  Escherichia coli BL21 ECD_00864 23S rRNA m(5)U747 methyltransferase, SAM-dependent insig. 28 78
  Escherichia coli ECRC62 BNILDI_20560 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Escherichia coli ECRC98 JDDGAC_09570 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Escherichia coli ECOR27 NOLOHH_22305 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02809 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Escherichia coli ECRC100 OKFHMN_05935 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC cofit 28 78
  Escherichia coli ECRC101 MCAODC_25150 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Escherichia coli ECRC102 NIAGMN_03980 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC cofit 28 78
  Escherichia coli ECRC99 KEDOAH_21975 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC no data 28 78
  Escherichia coli ECOR38 HEPCGN_02095 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 27 78
  Escherichia coli Nissle 1917 ECOLIN_RS04575 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Escherichia fergusonii Becca EFB2_03202 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 27 78
  Escherichia coli BW25113 b0859 rumB 23S rRNA m(5)U747-methyltransferase (NCBI) sig. 27 78
  Rahnella sp. WP5 EX31_RS09605 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 29 78
  Bifidobacterium breve UCC2003 BBR_RS16615 class I SAM-dependent RNA methyltransferase strong 28 94
  Desulfovibrio vulgaris Miyazaki F DvMF_1383 RNA methyltransferase, TrmA family (RefSeq) insig. 39 43
  Dinoroseobacter shibae DFL-12 Dshi_3492 (Uracil-5)-methyltransferase (RefSeq) insig. 31 94
  Shewanella loihica PV-4 Shew_0801 rumB 23S rRNA methyluridine methyltransferase (RefSeq) insig. 28 79
  Klebsiella pneumoniae MKP103 KDGMDA_17730 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Klebsiella pneumoniae MRSN742743 KFA93_RS01150 rlmC;go_function=rRNA 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 78
  Enterobacter asburiae PDN3 EX28DRAFT_2094 23S rRNA (uracil-5-)-methyltransferase RumB insig. 29 78
  Klebsiella michiganensis M5al BWI76_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase insig. 26 78
  Bosea sp. OAE506 ABIE41_RS22255 RNA methyltransferase insig. 30 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08425 class I SAM-dependent RNA methyltransferase cofit 28 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF763 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) insig. 27 79
  Serratia liquefaciens MT49 IAI46_08395 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 27 78
  Enterobacter sp. TBS_079 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 26 79
  Shewanella sp. ANA-3 Shewana3_3309 rumB 23S rRNA methyluridine methyltransferase (RefSeq) insig. 28 78
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04310 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC cofit 28 79
  Pantoea sp. MT58 IAI47_13020 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 28 79
  Shewanella oneidensis MR-1 SO0980 RNA methyltransferase, TrmA family (NCBI ptt file) insig. 26 78
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02375 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 33 40
  Pectobacterium carotovorum WPP14 HER17_RS00975 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 29 76
  Acinetobacter baumannii LAC-4 RR41_RS11900 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 27 70
  Dickeya dianthicola 67-19 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 29 69
  Dickeya dianthicola ME23 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 29 69
  Sphingobium sp. HT1-2 GFF99 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) cofit 31 80
  Rahnella sp. WP5 EX31_RS14140 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 29 76
  Serratia liquefaciens MT49 IAI46_24455 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 28 74
  Pectobacterium carotovorum WPP14 HER17_RS12475 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 35 39
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18390 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 28 77
  Pantoea sp. MT58 IAI47_00950 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 28 77
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) cofit 29 75
  Alteromonas macleodii MIT1002 MIT1002_03370 tRNA (uracil(54)-C(5))-methyltransferase insig. 34 38
  Pseudomonas aeruginosa PUPa3 DQ20_RS52695 trmA;go_function=tRNA tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 29 76
  Dickeya dadantii 3937 DDA3937_RS09485 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 25 78
  Pseudomonas aeruginosa MRSN321 DY961_RS09335 trmA;go_function=S-adenosylmethionine-dependent tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 29 76
  Pseudomonas aeruginosa PA14 IKLFDK_30015 tRNA (uridine(54)-C5)-methyltransferase TrmA strong 29 76
  Pseudomonas sp. BP01 JOY50_RS27500 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 27 75
  Dickeya dadantii 3937 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 29 69
  Pseudomonas stutzeri RCH2 Psest_3451 tRNA (uracil-5-)-methyltransferase sig. 33 38
  Escherichia coli ECRC101 MCAODC_04035 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 28 75
  Klebsiella michiganensis M5al BWI76_RS00885 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 33 39
  Escherichia fergusonii Becca EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 28 75
  Escherichia coli ECRC100 OKFHMN_13535 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 28 75
  Escherichia coli ECRC102 NIAGMN_11285 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 28 75
  Escherichia coli ECRC98 JDDGAC_17160 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 28 75
  Escherichia coli ECRC99 KEDOAH_14625 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA no data 28 75
  Escherichia coli Nissle 1917 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 28 75
  Escherichia coli BL21 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase cofit 27 75
  Escherichia coli ECOR27 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 27 75
  Escherichia coli ECRC62 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 27 75
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 27 75
  Escherichia coli BW25113 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) sig. 27 75
  Pseudomonas putida KT2440 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase strong 33 38
  Pseudomonas segetis P6 ACVTMO_RS19815 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 33 38
  Pseudomonas sp. SVBP6 COO64_RS02860 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 28 74
  Dickeya dianthicola ME23 DZA65_RS09815 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 25 78
  Pseudomonas sp. S08-1 OH686_16060 tRNA (uracil(54)-C(5))-methyltransferase cofit 28 74
  Pseudomonas sp. RS175 PFR28_03809 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 27 74
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13145 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 26 76
  Erwinia tracheiphila SCR3 LU632_RS19550 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 26 76
  Pseudomonas fluorescens FW300-N2C3 AO356_15600 tRNA (uracil-5-)-methyltransferase insig. 27 74
  Escherichia coli ECOR38 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 27 75
  Dickeya dianthicola 67-19 HGI48_RS09505 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 25 78
  Pseudomonas syringae pv. syringae B728a Psyr_4287 tRNA (uracil-5-)-methyltransferase insig. 31 41
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4287 tRNA (uracil-5-)-methyltransferase insig. 31 41
  Erwinia amylovora T8 OLJFJH_06160 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 28 76
  Pseudomonas sp. DMC3 GFF3938 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 32 38
  Klebsiella pneumoniae MKP103 KDGMDA_09400 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 34 39
  Klebsiella pneumoniae MRSN742743 KFA93_RS22875 trmA;go_function=tRNA tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 34 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) strong 32 38
  Shewanella sp. ANA-3 Shewana3_0179 tRNA (uracil-5-)-methyltransferase (RefSeq) insig. 32 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) sig. 27 74
  Acinetobacter radioresistens SK82 MPMX26_01714 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 25 73
  Pseudomonas fluorescens FW300-N2E3 AO353_13905 tRNA (uracil-5-)-methyltransferase sig. 32 38
  Enterobacter sp. TBS_079 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 31 40
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05030 tRNA/tmRNA (uracil-C(5))-methyltransferase insig. 26 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) insig. 27 74
  Shewanella loihica PV-4 Shew_0138 tRNA (uracil-5-)-methyltransferase (RefSeq) insig. 31 38
  Pseudomonas simiae WCS417 PS417_24385 tRNA (uracil-5-)-methyltransferase sig. 31 41
  Pseudomonas orientalis W4I3 QF045_RS26680 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 26 74
  Pseudomonas fluorescens SBW25 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA cofit 26 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA sig. 26 74
  Desulfovibrio vulgaris Miyazaki F DvMF_1383 RNA methyltransferase, TrmA family (RefSeq) insig. 32 41
  Enterobacter asburiae PDN3 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase insig. 32 39
  Erwinia tracheiphila SCR3 LU632_RS09660 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC insig. 30 40
  Shewanella oneidensis MR-1 SO0206 trmA tRNA (uracil-5-)-methyltransferase (NCBI ptt file) sig. 30 38
  Dechlorosoma suillum PS Dsui_2239 tRNA (uracil-5-)-methyltransferase insig. 28 74
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20140 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC cofit 30 39
  Vibrio cholerae E7946 ATCC 55056 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA insig. 30 38
  Shewanella amazonensis SB2B Sama_0193 tRNA (uracil-5-)-methyltransferase (RefSeq) sig. 29 41
  Paraburkholderia graminis OAS925 ABIE53_002059 putative RNA-binding protein with TRAM domain sig. 34 25
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02375 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD cofit 25 32
  Mycobacterium tuberculosis H37Rv Rv2689c Conserved alanine and valine and glycine rich protein insig. 36 36
  Mycobacterium tuberculosis H37Rv Rv2689c Conserved alanine and valine and glycine rich protein insig. 30 34
  Paraburkholderia sabiae LMG 24235 QEN71_RS00350 class I SAM-dependent rRNA methyltransferase insig. 39 18
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5393.1 LSU m5C1962 methyltransferase RlmI insig. 38 19
  Alteromonas macleodii MIT1002 MIT1002_01515 Release factor glutamine methyltransferase strong 32 29
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09670 class I SAM-dependent rRNA methyltransferase strong 36 18
  Ralstonia solanacearum UW163 UW163_RS03910 class I SAM-dependent rRNA methyltransferase insig. 36 18
  Methylophilus sp. DMC18 GFF2056 Release factor glutamine methyltransferase no data 34 27
  Serratia liquefaciens MT49 IAI46_10285 peptide chain release factor N(5)-glutamine methyltransferase insig. 34 29
  Bacteroides ovatus ATCC 8483 BACOVA_04930 methyltransferase domain protein insig. 29 19
  Ralstonia sp. UNC404CL21Col ABZR87_RS05070 class I SAM-dependent rRNA methyltransferase insig. 35 18
  Paraburkholderia graminis OAS925 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase insig. 37 18
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02203 SAM-dependent methyltransferase /23S rRNA m(5)C-1962 methyltransferase insig. 37 18
  Burkholderia phytofirmans PsJN BPHYT_RS01650 23S rRNA methyltransferase insig. 37 18
  Ralstonia solanacearum PSI07 RPSI07_RS23695 class I SAM-dependent rRNA methyltransferase insig. 35 18
  Ralstonia solanacearum GMI1000 RS_RS00255 class I SAM-dependent rRNA methyltransferase insig. 33 18
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25680 prmC peptide chain release factor N(5)-glutamine methyltransferase no data 33 25
  Erwinia tracheiphila SCR3 LU632_RS10740 prmC peptide chain release factor N(5)-glutamine methyltransferase no data 33 25
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07045 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 35 18
  Rhodanobacter sp. FW510-T8 OKGIIK_02015 Release factor glutamine methyltransferase no data 32 32
  Shewanella sp. ANA-3 Shewana3_0977 SAM-dependent methyltransferase (RefSeq) insig. 30 22
  Vibrio cholerae E7946 ATCC 55056 CSW01_10840 protein-(glutamine-N5) methyltransferase, release factor-specific no data 33 29
  Vibrio cholerae E7946 ATCC 55056 CSW01_06820 ribosomal RNA large subunit methyltransferase I insig. 29 24
  Pectobacterium carotovorum WPP14 HER17_RS10485 peptide chain release factor N(5)-glutamine methyltransferase cofit 35 30
  Synechococcus elongatus PCC 7942 Synpcc7942_0439 chlM Mg-protoporphyrin IX methyl transferase no data 32 29