Homologs of CSW01_12200 from Vibrio cholerae E7946 ATCC 55056

ribosomal RNA small subunit methyltransferase H
SEED: rRNA small subunit methyltransferase H
KEGG: S-adenosyl-methyltransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_12200 ribosomal RNA small subunit methyltransferase H cofit 100 100
o Pectobacterium carotovorum WPP14 HER17_RS03120 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 66 100
o Serratia liquefaciens MT49 IAI46_03400 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 65 100
o Enterobacter sp. TBS_079 MPMX20_00775 Ribosomal RNA small subunit methyltransferase H strong 64 100
o Enterobacter asburiae PDN3 EX28DRAFT_3677 16S rRNA (cytosine(1402)-N(4))-methyltransferase no data 64 100
o Pantoea sp. MT58 IAI47_15970 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH sig. 66 100
o Rahnella sp. WP5 EX31_RS03645 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH sig. 66 100
o Dickeya dadantii 3937 DDA3937_RS18080 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH insig. 65 100
o Escherichia coli BL21 ECD_00083 16S rRNA m(4)C1402 methyltransferase, SAM-dependent no data 62 100
o Escherichia fergusonii Becca EFB2_03965 Ribosomal RNA small subunit methyltransferase H sig. 62 100
o Escherichia coli ECOR27 NOLOHH_03020 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Escherichia coli ECRC101 OKFHMN_10675 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Escherichia coli ECRC101 MCAODC_01190 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Escherichia coli ECRC102 NIAGMN_08525 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Escherichia coli ECRC62 BNILDI_08590 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH insig. 62 100
o Escherichia coli ECRC98 JDDGAC_14270 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Escherichia coli ECRC99 KEDOAH_17480 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03577 Ribosomal RNA small subunit methyltransferase H no data 62 100
o Escherichia coli BW25113 b0082 mraW S-adenosyl-methyltransferase (NCBI) strong 62 100
o Escherichia coli Nissle 1917 ECOLIN_RS00440 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Dickeya dianthicola ME23 DZA65_RS19160 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH insig. 65 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF156 rRNA small subunit methyltransferase H insig. 63 100
o Klebsiella michiganensis M5al BWI76_RS04720 16S rRNA (cytosine(1402)-N(4))-methyltransferase no data 63 100
o Dickeya dianthicola 67-19 HGI48_RS18015 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH cofit 65 100
o Escherichia coli ECOR38 HEPCGN_08655 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 62 100
o Erwinia tracheiphila SCR3 LU632_RS02910 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH strong 63 100
o Shewanella loihica PV-4 Shew_3461 mraW S-adenosyl-methyltransferase MraW (RefSeq) no data 62 100
o Shewanella sp. ANA-3 Shewana3_3751 mraW S-adenosyl-methyltransferase MraW (RefSeq) no data 61 100
o Shewanella oneidensis MR-1 SO4227 conserved hypothetical protein TIGR00006 (NCBI ptt file) strong 61 100
o Shewanella amazonensis SB2B Sama_0346 mraW S-adenosyl-methyltransferase MraW (RefSeq) no data 61 100
o Alteromonas macleodii MIT1002 MIT1002_03033 Ribosomal RNA small subunit methyltransferase H sig. 61 99
o Kangiella aquimarina DSM 16071 B158DRAFT_2114 S-adenosyl-methyltransferase MraW strong 52 100
o Pseudomonas sp. S08-1 OH686_08330 16S rRNA (cytosine(1402)-N(4))-methyltransferase no data 51 100
o Pseudomonas stutzeri RCH2 Psest_3267 S-adenosyl-methyltransferase MraW no data 50 99
o Pseudomonas syringae pv. syringae B728a Psyr_4110 methyltransferase no data 52 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4110 methyltransferase no data 52 100
o Marinobacter adhaerens HP15 HP15_556 S-adenosyl-L-methionine-dependent methyltransferase mraW insig. 54 99
o Pseudomonas putida KT2440 PP_1329 Ribosomal RNA small subunit methyltransferase H no data 51 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1645 rRNA small subunit methyltransferase H no data 50 100
o Pseudomonas simiae WCS417 PS417_04600 16S rRNA methyltransferase no data 51 100
o Pseudomonas fluorescens SBW25 PFLU_RS04665 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 51 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS04665 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 51 100
o Pseudomonas sp. RS175 PFR28_03595 Ribosomal RNA small subunit methyltransferase H no data 49 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17120 ribosomal RNA small subunit methyltransferase H no data 50 100
o Cupriavidus basilensis FW507-4G11 RR42_RS18115 16S rRNA methyltransferase no data 52 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS27435 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 52 100
o Pseudomonas fluorescens FW300-N2E3 AO353_15300 ribosomal RNA small subunit methyltransferase H no data 49 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_951 rRNA small subunit methyltransferase H no data 49 100
o Burkholderia phytofirmans PsJN BPHYT_RS17275 16S rRNA methyltransferase no data 51 100
o Dechlorosoma suillum PS Dsui_0245 S-adenosyl-methyltransferase MraW strong 52 98
o Paraburkholderia graminis OAS925 ABIE53_003621 16S rRNA (cytosine1402-N4)-methyltransferase no data 51 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06230 16S rRNA (cytosine1402-N4)-methyltransferase no data 51 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS01980 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH sig. 50 100
o Ralstonia solanacearum GMI1000 RS_RS14265 ribosomal RNA small subunit methyltransferase H no data 49 100
o Ralstonia solanacearum PSI07 RPSI07_RS10925 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 49 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06315 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 49 100
o Ralstonia solanacearum UW163 UW163_RS07310 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 49 100
o Lysobacter sp. OAE881 ABIE51_RS04710 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH insig. 49 98
o Rhodanobacter denitrificans MT42 LRK55_RS11940 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 52 99
o Acinetobacter radioresistens SK82 MPMX26_02824 Ribosomal RNA small subunit methyltransferase H strong 48 98
o Variovorax sp. SCN45 GFF4481 16S rRNA (cytosine(1402)-N(4))-methyltransferase (EC 2.1.1.199) no data 48 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS12205 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 53 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF555 rRNA small subunit methyltransferase H no data 49 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4363.1 rRNA small subunit methyltransferase H no data 49 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11365 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 52 99
o Rhodanobacter sp. FW510-T8 OKGIIK_11720 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 51 99
o Herbaspirillum seropedicae SmR1 HSERO_RS01625 16S rRNA methyltransferase no data 52 97
o Acidovorax sp. GW101-3H11 Ac3H11_2007 rRNA small subunit methyltransferase H no data 49 100
o Variovorax sp. OAS795 ABID97_RS06195 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH sig. 48 100
o Castellaniella sp019104865 MT123 ABCV34_RS09685 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 46 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5348 rRNA small subunit methyltransferase H no data 48 87
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3455 16S rRNA (cytosine(1402)-N(4))-methyltransferase no data 44 98
o Synechococcus elongatus PCC 7942 Synpcc7942_0975 mraW S-adenosyl-methyltransferase MraW strong 41 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0317 S-adenosyl-methyltransferase MraW no data 43 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10865 16S rRNA (cytosine(1402)-N(4))-methyltransferase no data 43 98
o Desulfovibrio vulgaris Miyazaki F DvMF_0963 S-adenosyl-methyltransferase MraW (RefSeq) no data 42 99
o Agrobacterium fabrum C58 Atu2102 S-adenosyl methionine-dependent methytransferase no data 42 97
o Magnetospirillum magneticum AMB-1 AMB_RS19435 ribosomal RNA small subunit methyltransferase H no data 43 95
o Bosea sp. OAE506 ABIE41_RS12560 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH insig. 42 98
o Rhodopseudomonas palustris CGA009 TX73_018335 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH strong 42 98
o Sinorhizobium meliloti 1021 SMc01858 S-adenosyl-methyltransferase MraW strong 43 97
o Rhodospirillum rubrum S1H Rru_A0958 methyltransferase (NCBI) no data 41 100
o Bacteroides stercoris CC31F HMPREF1181_RS02780 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 40 98
o Rhizobium sp. OAE497 ABIE40_RS11875 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH insig. 40 98
o Bacteroides thetaiotaomicron VPI-5482 BT3455 S-adenosyl-methyltransferase mraW (NCBI ptt file) no data 40 98
o Phaeobacter inhibens DSM 17395 PGA1_c09490 S-adenosyl-L-methionine-dependent methyltransferase MraW no data 43 99
o Phocaeicola dorei CL03T12C01 ABI39_RS04315 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 39 98
o Fusobacterium nucleatum SB010 HUW76_01265 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH strong 40 98
o Azospirillum brasilense Sp245 AZOBR_RS12280 16S rRNA methyltransferase no data 42 94
o Bacteroides ovatus ATCC 8483 BACOVA_01850 S-adenosyl-methyltransferase MraW no data 39 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12430 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 39 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03865 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 42 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS04665 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH strong 39 97
o Azospirillum sp. SherDot2 MPMX19_01670 Ribosomal RNA small subunit methyltransferase H no data 44 82
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01965 16S rRNA (cytosine(1402)-N(4))-methyltransferase no data 40 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01485 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no data 41 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU2512 mraW S-adenosyl-methyltransferase MraW (TIGR) strong 41 98
o Caulobacter crescentus NA1000 CCNA_02645 S-adenosyl-methyltransferase MraW no data 42 97
o Caulobacter crescentus NA1000 Δfur CCNA_02645 S-adenosyl-methyltransferase MraW cofit 42 97
o Mycobacterium tuberculosis H37Rv Rv2165c Conserved protein no data 39 99