Homologs of Atu2082 from Agrobacterium fabrum C58

DNA ligase
SEED: DNA ligase (EC 6.5.1.2)
KEGG: DNA ligase (NAD+)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu2082 DNA ligase no data 100 100
o Rhizobium sp. OAE497 ABIE40_RS11775 NAD-dependent DNA ligase LigA no data 79 99
o Sinorhizobium meliloti 1021 SMc01878 NAD-dependent DNA ligase LigA no data 78 100
o Rhodopseudomonas palustris CGA009 TX73_018230 NAD-dependent DNA ligase LigA no data 59 99
o Bosea sp. OAE506 ABIE41_RS12670 NAD-dependent DNA ligase LigA no data 59 99
o Dinoroseobacter shibae DFL-12 Dshi_1509 DNA ligase, NAD-dependent (RefSeq) no data 56 100
o Phaeobacter inhibens DSM 17395 PGA1_c14370 DNA ligase LigA no data 53 99
o Magnetospirillum magneticum AMB-1 AMB_RS19525 DNA ligase (NAD(+)) LigA no data 54 99
o Rhodospirillum rubrum S1H Rru_A0939 DNA ligase (NAD+) (NCBI) no data 53 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3775 DNA ligase, NAD-dependent no data 52 97
  Azospirillum brasilense Sp245 AZOBR_RS12375 NAD-dependent DNA ligase LigA no data 56 86
  Azospirillum sp. SherDot2 MPMX19_01688 DNA ligase no data 55 83
o Rahnella sp. WP5 EX31_RS20160 NAD-dependent DNA ligase LigA no data 47 97
o Dickeya dadantii 3937 DDA3937_RS17095 NAD-dependent DNA ligase LigA no data 46 100
o Dickeya dianthicola ME23 DZA65_RS18230 NAD-dependent DNA ligase LigA no data 47 96
o Enterobacter asburiae PDN3 EX28DRAFT_0217 DNA ligase, NAD-dependent no data 46 98
o Klebsiella michiganensis M5al BWI76_RS20625 DNA ligase (NAD(+)) LigA no data 46 98
o Enterobacter sp. TBS_079 MPMX20_03305 DNA ligase no data 46 98
o Dickeya dianthicola 67-19 HGI48_RS17145 NAD-dependent DNA ligase LigA no data 46 100
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07250 NAD-dependent DNA ligase LigA no data 55 83
o Pantoea sp. MT58 IAI47_05455 NAD-dependent DNA ligase LigA no data 46 97
o Escherichia coli ECOR27 NOLOHH_13895 ligA NAD-dependent DNA ligase LigA no data 46 98
o Escherichia coli ECRC62 BNILDI_12760 ligA NAD-dependent DNA ligase LigA no data 46 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2041 DNA ligase (EC 6.5.1.2) no data 47 98
o Escherichia coli Nissle 1917 ECOLIN_RS13855 NAD-dependent DNA ligase LigA no data 46 98
o Escherichia coli BL21 ECD_02311 DNA ligase, NAD(+)-dependent no data 46 98
o Escherichia coli ECRC101 OKFHMN_22215 ligA NAD-dependent DNA ligase LigA no data 46 98
o Escherichia coli ECRC101 MCAODC_12745 ligA NAD-dependent DNA ligase LigA no data 46 98
o Escherichia coli ECRC102 NIAGMN_19985 ligA NAD-dependent DNA ligase LigA no data 46 98
o Escherichia coli ECRC98 JDDGAC_26165 ligA NAD-dependent DNA ligase LigA no data 46 98
o Escherichia coli ECRC99 KEDOAH_06005 ligA NAD-dependent DNA ligase LigA no data 46 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01312 DNA ligase no data 46 98
o Escherichia coli BW25113 b2411 ligA NAD-dependent DNA ligase LigA (NCBI) no data 46 98
o Escherichia fergusonii Becca EFB2_01465 DNA ligase no data 46 98
o Escherichia coli ECOR38 HEPCGN_21395 ligA NAD-dependent DNA ligase LigA no data 46 98
o Shewanella sp. ANA-3 Shewana3_1569 DNA ligase, NAD-dependent (RefSeq) no data 45 97
o Shewanella loihica PV-4 Shew_2377 DNA ligase, NAD-dependent (RefSeq) no data 45 97
o Shewanella oneidensis MR-1 SO2896 ligA DNA ligase, NAD-dependent (NCBI ptt file) no data 45 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4556 DNA ligase (EC 6.5.1.2) no data 45 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_04960 DNA ligase (NAD(+)) LigA no data 45 98
o Serratia liquefaciens MT49 IAI46_18430 NAD-dependent DNA ligase LigA no data 46 97
o Marinobacter adhaerens HP15 HP15_1535 NAD-dependent DNA ligase no data 46 96
o Pectobacterium carotovorum WPP14 HER17_RS04045 NAD-dependent DNA ligase LigA no data 46 97
o Herbaspirillum seropedicae SmR1 HSERO_RS10825 NAD-dependent DNA ligase LigA no data 46 97
o Acidovorax sp. GW101-3H11 Ac3H11_2314 DNA ligase (EC 6.5.1.2) no data 45 96
o Shewanella amazonensis SB2B Sama_1516 DNA ligase (NAD(+)) (RefSeq) no data 44 98
  Caulobacter crescentus NA1000 CCNA_01590 NAD-dependent DNA ligase no data 50 85
  Caulobacter crescentus NA1000 Δfur CCNA_01590 NAD-dependent DNA ligase no data 50 85
o Burkholderia phytofirmans PsJN BPHYT_RS12165 DNA ligase no data 46 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00604 DNA ligase (NAD+) no data 45 97
o Variovorax sp. OAS795 ABID97_RS15625 NAD-dependent DNA ligase LigA no data 45 97
o Kangiella aquimarina DSM 16071 B158DRAFT_1773 DNA ligase, NAD-dependent no data 44 98
o Cupriavidus basilensis FW507-4G11 RR42_RS11905 NAD-dependent DNA ligase LigA no data 47 96
o Variovorax sp. SCN45 GFF1299 DNA ligase (NAD(+)) (EC 6.5.1.2) no data 45 97
o Paraburkholderia graminis OAS925 ABIE53_002511 DNA ligase (NAD+) no data 45 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS06395 NAD-dependent DNA ligase LigA no data 45 100
o Erwinia tracheiphila SCR3 LU632_RS06640 ligA NAD-dependent DNA ligase LigA no data 45 97
o Alteromonas macleodii MIT1002 MIT1002_01924 DNA ligase no data 44 98
o Castellaniella sp019104865 MT123 ABCV34_RS08555 NAD-dependent DNA ligase LigA no data 44 97
o Acinetobacter radioresistens SK82 MPMX26_02460 DNA ligase no data 42 98
  Pseudomonas putida KT2440 PP_4274 DNA ligase no data 43 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3306.1 DNA ligase (EC 6.5.1.2) no data 43 85
  Lysobacter sp. OAE881 ABIE51_RS08890 NAD-dependent DNA ligase LigA no data 44 87
  Ralstonia sp. UNC404CL21Col ABZR87_RS11795 NAD-dependent DNA ligase LigA no data 44 85
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4080 DNA ligase (EC 6.5.1.2) no data 39 98
  Ralstonia solanacearum GMI1000 RS_RS07015 DNA ligase (NAD(+)) LigA no data 43 89
  Pseudomonas syringae pv. syringae B728a Psyr_1819 NAD-dependent DNA ligase no data 43 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1819 NAD-dependent DNA ligase no data 43 85
  Pseudomonas sp. S08-1 OH686_02590 DNA ligase, NAD-dependent no data 42 88
  Ralstonia solanacearum PSI07 RPSI07_RS17130 NAD-dependent DNA ligase LigA no data 44 85
  Rhodanobacter denitrificans MT42 LRK55_RS17660 NAD-dependent DNA ligase LigA no data 44 86
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17440 NAD-dependent DNA ligase LigA no data 44 86
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3857 DNA ligase (EC 6.5.1.2) no data 40 95
o Pseudomonas fluorescens FW300-N2E3 AO353_00710 aromatic ring-opening dioxygenase LigA no data 41 94
o Pseudomonas sp. RS175 PFR28_01068 DNA ligase no data 40 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2332 DNA ligase (EC 6.5.1.2) no data 40 94
o Pseudomonas fluorescens SBW25 PFLU_RS22480 NAD-dependent DNA ligase LigA no data 40 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22480 NAD-dependent DNA ligase LigA no data 40 95
o Pseudomonas simiae WCS417 PS417_20865 NAD-dependent DNA ligase LigA no data 40 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00345 NAD-dependent DNA ligase LigA no data 43 85
  Ralstonia solanacearum UW163 UW163_RS13675 NAD-dependent DNA ligase LigA no data 43 85
o Desulfovibrio vulgaris Hildenborough JW710 DVU1608 ligA DNA ligase, NAD-dependent (TIGR) no data 41 98
  Pseudomonas fluorescens FW300-N2C3 AO356_02540 aromatic ring-opening dioxygenase LigA no data 40 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS01875 NAD-dependent DNA ligase LigA no data 42 87
o Desulfovibrio vulgaris Miyazaki F DvMF_0451 DNA ligase, NAD-dependent (RefSeq) insig. 41 97
  Dechlorosoma suillum PS Dsui_2701 DNA ligase, NAD-dependent no data 44 82
  Rhodanobacter sp. FW510-T8 OKGIIK_07500 ligA NAD-dependent DNA ligase LigA no data 43 86
  Pseudomonas stutzeri RCH2 Psest_2508 DNA ligase, NAD-dependent no data 42 86
o Mycobacterium tuberculosis H37Rv Rv3014c DNA ligase [NAD dependent] LigA (polydeoxyribonucleotide synthase [NAD+]) no data 39 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04510 DNA ligase (NAD(+)) LigA no data 37 97
o Synechococcus elongatus PCC 7942 Synpcc7942_0277 ligA NAD-dependent DNA ligase LigA no data 38 95
o Phocaeicola dorei CL03T12C01 ABI39_RS17240 NAD-dependent DNA ligase LigA no data 37 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03985 NAD-dependent DNA ligase LigA no data 37 98
o Bacteroides stercoris CC31F HMPREF1181_RS14170 NAD-dependent DNA ligase LigA no data 36 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02055 DNA ligase (NAD(+)) LigA no data 35 98
o Bacteroides ovatus ATCC 8483 BACOVA_02616 DNA ligase (NAD+) no data 37 97
o Bacteroides thetaiotaomicron VPI-5482 BT0894 DNA ligase (NCBI ptt file) no data 36 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01725 NAD-dependent DNA ligase LigA no data 36 96
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11720 NAD-dependent DNA ligase LigA no data 34 98
o Fusobacterium nucleatum SB010 HUW76_01225 NAD-dependent DNA ligase LigA no data 35 98