Homologs of Atu1305 from Agrobacterium fabrum C58

DNA processing chain A
SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
KEGG: DNA processing protein

139 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu1305 DNA processing chain A insig. 100 100
o Sinorhizobium meliloti 1021 SMc01363 hypothetical protein insig. 65 100
o Rhizobium sp. OAE497 ABIE40_RS07365 DNA-processing protein DprA insig. 70 100
o Xanthobacter sp. DMC5 GFF932 hypothetical protein insig. 57 96
o Azospirillum sp. SherDot2 MPMX19_01508 hypothetical protein insig. 51 96
o Bosea sp. OAE506 ABIE41_RS17215 DNA-processing protein DprA insig. 50 96
o Magnetospirillum magneticum AMB-1 AMB_RS03500 DNA-protecting protein DprA cofit 52 97
o Rhodopseudomonas palustris CGA009 TX73_016135 DNA-processing protein DprA insig. 55 93
o Azospirillum brasilense Sp245 AZOBR_RS15885 DNA processing protein DprA insig. 50 96
o Rhodospirillum rubrum S1H Rru_A3194 SMF protein (NCBI) insig. 47 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2448 DNA protecting protein DprA insig. 52 94
o Sphingobium sp. HT1-2 GFF113 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake cofit 49 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04240 DNA-processing protein DprA insig. 46 96
o Caulobacter crescentus NA1000 CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 46 96
o Caulobacter crescentus NA1000 Δfur CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 46 96
o Phaeobacter inhibens DSM 17395 PGA1_c06230 putative protein Smf insig. 43 93
o Dinoroseobacter shibae DFL-12 Dshi_1138 DNA protecting protein DprA (RefSeq) insig. 44 94
o Dechlorosoma suillum PS Dsui_0819 DNA protecting protein DprA cofit 39 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09755 DNA-protecting protein DprA insig. 38 97
o Ralstonia solanacearum UW163 UW163_RS03825 DNA-protecting protein DprA insig. 38 97
o Pseudomonas fluorescens SBW25 PFLU_RS00100 DNA-protecting protein DprA cofit 40 84
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00100 DNA-protecting protein DprA insig. 40 84
o Pseudomonas orientalis W4I3 QF045_RS03040 DNA-processing protein DprA insig. 39 84
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00227 hypothetical protein insig. 40 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4125 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 77
o Acidovorax sp. GW101-3H11 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 38 93
o Ralstonia solanacearum GMI1000 RS_RS00340 DNA-protecting protein DprA insig. 38 97
o Pseudomonas fluorescens FW300-N2C3 AO356_11295 DNA processing protein DprA insig. 39 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS00150 DNA-processing protein DprA insig. 36 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_648 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 75
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 38 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS04985 DNA-processing protein DprA insig. 37 93
  Ralstonia solanacearum PSI07 RPSI07_RS23610 DNA-protecting protein DprA sig. 38 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1910 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 42 75
  Pseudomonas protegens RBAN4 FABNJH_00130 dprA DNA-processing protein DprA insig. 41 74
  Shewanella sp. ANA-3 Shewana3_0037 DNA protecting protein DprA (RefSeq) insig. 40 76
  Pseudomonas sp. DMC3 GFF594 hypothetical protein cofit 42 77
  Shewanella oneidensis MR-1 SO0034 DNA processing protein DprA, putative (NCBI ptt file) insig. 40 76
  Pseudomonas sp. S08-1 OH686_12505 DNA protecting protein DprA insig. 43 75
  Pseudomonas fluorescens FW300-N2E3 AO353_10650 DNA processing protein DprA insig. 41 75
  Rhodanobacter denitrificans MT42 LRK55_RS09785 DNA-processing protein DprA insig. 37 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10145 DNA-processing protein DprA sig. 37 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_00245 DNA-protecting protein DprA insig. 39 79
  Enterobacter asburiae PDN3 EX28DRAFT_0042 DNA protecting protein DprA insig. 34 94
  Castellaniella sp019104865 MT123 ABCV34_RS14195 DNA-processing protein DprA insig. 35 93
  Pseudomonas stutzeri RCH2 Psest_0025 DNA protecting protein DprA sig. 48 54
  Pseudomonas sp. BP01 JOY50_RS08235 dprA DNA-processing protein DprA insig. 41 75
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13870 DNA-processing protein DprA insig. 37 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02242 DNA protecting protein DprA insig. 42 72
  Variovorax sp. SCN45 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 39 76
  Lysobacter sp. OAE881 ABIE51_RS02235 DNA-processing protein DprA insig. 38 88
  Paraburkholderia graminis OAS925 ABIE53_000387 DNA processing protein insig. 42 72
  Herbaspirillum seropedicae SmR1 HSERO_RS23400 DNA processing protein DprA insig. 36 87
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12485 dprA DNA-protecting protein DprA cofit 38 74
  Rhodanobacter sp. FW510-T8 OKGIIK_13770 dprA DNA-processing protein DprA insig. 38 88
  Burkholderia phytofirmans PsJN BPHYT_RS01450 DNA-binding protein insig. 37 77
  Pseudomonas sp. RS175 PFR28_04659 hypothetical protein insig. 42 75
  Acinetobacter baumannii LAC-4 RR41_RS18085 DNA-processing protein DprA insig. 34 89
  Erwinia tracheiphila SCR3 LU632_RS22465 dprA DNA-protecting protein DprA insig. 38 74
  Pseudomonas segetis P6 ACVTMO_RS01365 dprA DNA-processing protein DprA insig. 39 78
  Variovorax sp. OAS795 ABID97_RS01830 DNA-processing protein DprA insig. 34 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS02310 dprA DNA-protecting protein DprA cofit 38 74
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 38 74
  Pantoea sp. MT58 IAI47_02295 DNA-protecting protein DprA insig. 38 74
  Shewanella amazonensis SB2B Sama_0045 DNA processing protein DprA, putative (RefSeq) insig. 38 76
  Synechococcus elongatus PCC 7942 Synpcc7942_0703 smf DNA processing protein DprA, putative insig. 34 90
  Pseudomonas putida KT2440 PP_0069 putative Rossmann fold nucleotide-binding protein sig. 40 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02925 DNA-processing protein DprA insig. 37 88
  Pseudomonas sp. SVBP6 COO64_RS02230 dprA DNA-processing protein DprA insig. 35 95
  Serratia liquefaciens MT49 IAI46_23260 DNA-protecting protein DprA insig. 39 77
  Acinetobacter radioresistens SK82 MPMX26_00114 hypothetical protein insig. 33 89
  Methylophilus sp. DMC18 GFF1494 hypothetical protein insig. 32 96
  Pseudomonas aeruginosa PA14 IKLFDK_25455 DNA-processing protein DprA insig. 47 54
  Pseudomonas aeruginosa MRSN321 DY961_RS26305 dprA;go_process=DNA-mediated DNA-processing protein DprA insig. 47 54
  Pseudomonas aeruginosa PUPa3 DQ20_RS58710 dprA;go_process=DNA-mediated DNA-processing protein DprA sig. 47 54
  Alteromonas macleodii MIT1002 MIT1002_00022 DNA protecting protein DprA insig. 35 77
  Enterobacter sp. TBS_079 MPMX20_04193 hypothetical protein insig. 38 77
  Kangiella aquimarina DSM 16071 B158DRAFT_0400 DNA protecting protein DprA insig. 37 81
  Pseudomonas syringae pv. syringae B728a Psyr_0021 DNA protecting protein DprA insig. 42 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0021 DNA protecting protein DprA insig. 42 75
  Dickeya dianthicola 67-19 HGI48_RS19210 DNA-protecting protein DprA insig. 32 96
  Dickeya dianthicola ME23 DZA65_RS20335 DNA-protecting protein DprA insig. 32 96
  Klebsiella michiganensis M5al BWI76_RS25665 DNA-processing protein DprA insig. 32 94
  Pectobacterium carotovorum WPP14 HER17_RS02230 DNA-protecting protein DprA insig. 37 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 39 74
  Dickeya dadantii 3937 DDA3937_RS19120 DNA-protecting protein DprA insig. 41 57
  Escherichia coli ECOR38 HEPCGN_16365 dprA DNA-protecting protein DprA insig. 34 94
  Escherichia coli Nissle 1917 ECOLIN_RS18860 DNA-protecting protein DprA insig. 34 94
  Escherichia coli ECRC102 NIAGMN_15305 dprA DNA-protecting protein DprA insig. 34 94
  Escherichia coli ECRC98 JDDGAC_21165 dprA DNA-protecting protein DprA insig. 34 94
  Escherichia coli BL21 ECD_03136 DNA recombination-mediator A family protein insig. 34 94
  Escherichia coli ECRC101 MCAODC_08065 dprA DNA-protecting protein DprA insig. 34 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00418 hypothetical protein insig. 34 94
  Escherichia coli BW25113 b4473 smf hypothetical protein (NCBI) insig. 34 94
  Escherichia fergusonii Becca EFB2_00538 hypothetical protein insig. 34 94
  Escherichia coli ECOR27 NOLOHH_09335 dprA DNA-protecting protein DprA insig. 34 94
  Rahnella sp. WP5 EX31_RS15970 DNA-protecting protein DprA cofit 34 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11685 DNA-protecting protein DprA insig. 33 96
  Escherichia coli ECRC62 BNILDI_02185 dprA DNA-protecting protein DprA cofit 33 94
  Escherichia coli ECRC99 KEDOAH_10605 dprA DNA-protecting protein DprA no data 33 94
  Cupriavidus basilensis FW507-4G11 RR42_RS20480 DNA processing protein DprA insig. 34 97
  Phocaeicola dorei CL03T12C01 ABI39_RS05220 DNA-processing protein DprA insig. 32 96
  Escherichia coli ECRC100 OKFHMN_17535 dprA DNA-protecting protein DprA insig. 37 72
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04370 DNA protecting protein DprA insig. 31 93
  Synechocystis sp000284455 PCC 6803 SGL_RS05985 DNA-processing protein DprA insig. 30 95
  Shewanella loihica PV-4 Shew_3734 DNA protecting protein DprA (RefSeq) insig. 43 55
  Klebsiella pneumoniae MKP103 KDGMDA_06535 DNA-protecting protein DprA insig. 35 75
  Klebsiella pneumoniae MRSN742743 KFA93_RS24750 dprA;go_process=DNA-mediated DNA-protecting protein DprA insig. 35 75
  Marinobacter adhaerens HP15 HP15_3746 DNA protecting protein DprA insig. 34 87
  Erwinia amylovora T8 OLJFJH_03705 DNA-protecting protein DprA insig. 33 85
  Fusobacterium nucleatum SB010 HUW76_06810 DNA-protecting protein DprA strong 33 77
  Desulfovibrio vulgaris Hildenborough JW710 DVU2069 dprA DNA processing protein DprA, putative (TIGR) insig. 39 73
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3854 DNA protecting protein DprA insig. 30 91
  Cellulophaga baltica 18 M666_RS05300 DNA-processing protein DprA insig. 32 74
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05335 DNA-processing protein DprA insig. 35 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13955 DNA-processing protein DprA insig. 31 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06145 DNA protecting protein DprA insig. 30 95
  Bacteroides thetaiotaomicron VPI-5482 BT3070 Smf protein DNA processing chain A (NCBI ptt file) insig. 31 80
  Desulfovibrio vulgaris Miyazaki F DvMF_0771 DNA protecting protein DprA (RefSeq) insig. 38 73
  Bacteroides ovatus ATCC 8483 BACOVA_02721 DNA protecting protein DprA insig. 32 80
  Bacteroides stercoris CC31F HMPREF1181_RS01510 DNA-protecting protein DprA insig. 34 74
  Bifidobacterium breve UCC2003 BBR_RS14565 DNA-processing protein DprA insig. 39 56
  Bifidobacterium breve UCC2003 BBR_RS18365 DNA-processing protein DprA no data 34 49
  Mycobacterium tuberculosis H37Rv Rv2896c Conserved hypothetical protein insig. 34 82
  Pseudomonas aeruginosa PUPa3 DQ20_RS60845 DNA-processing protein DprA no data 29 52
  Bacteroides ovatus ATCC 8483 BACOVA_02336 putative DNA protecting protein DprA strong 30 51
  Fusobacterium nucleatum SB010 HUW76_07255 DNA-protecting protein DprA cofit 28 65
  Acinetobacter baumannii LAC-4 RR41_RS09535 DNA-processing protein DprA no data 30 54
  Pseudomonas syringae pv. syringae B728a Psyr_3805 hypothetical protein sig. 26 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3805 hypothetical protein insig. 26 65
  Escherichia coli Nissle 1917 ECOLIN_RS19655 DNA-processing protein DprA insig. 26 60
  Escherichia coli ECOR27 NOLOHH_08655 smf DNA processing protein DprA insig. 31 27
  Escherichia coli ECRC100 OKFHMN_16865 smf DNA processing protein DprA insig. 26 68
  Escherichia coli ECRC101 MCAODC_07395 smf DNA processing protein DprA insig. 26 68
  Escherichia coli ECRC102 NIAGMN_14635 smf DNA processing protein DprA insig. 26 68
  Escherichia coli ECRC98 JDDGAC_20495 smf DNA processing protein DprA insig. 26 68
  Escherichia coli ECRC99 KEDOAH_11275 smf DNA processing protein DprA no data 26 68
  Klebsiella michiganensis M5al BWI76_RS26225 DNA processing protein DprA insig. 25 46
  Escherichia coli ECOR38 HEPCGN_15680 smf DNA processing protein DprA insig. 26 60