Homologs of ABZR87_RS06960 from Ralstonia sp. UNC404CL21Col

16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
SEED: Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)

143 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Ralstonia sp. UNC404CL21Col ABZR87_RS06960 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 100 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11070 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 76 100
o Ralstonia solanacearum UW163 UW163_RS02510 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD no data 76 100
o Ralstonia solanacearum GMI1000 RS_RS01920 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 77 100
o Ralstonia solanacearum PSI07 RPSI07_RS22230 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 76 100
o Cupriavidus basilensis FW507-4G11 RR42_RS01990 methyltransferase insig. 52 87
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01968 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 49 99
o Burkholderia phytofirmans PsJN BPHYT_RS02815 methyltransferase sig. 48 99
o Paraburkholderia graminis OAS925 ABIE53_000701 16S rRNA (guanine966-N2)-methyltransferase sig. 50 99
o Acidovorax sp. GW101-3H11 Ac3H11_3873 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no data 54 88
o Paraburkholderia sabiae LMG 24235 QEN71_RS01665 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 50 94
o Herbaspirillum seropedicae SmR1 HSERO_RS20695 methyltransferase sig. 49 90
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF817 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) cofit 48 94
o Dechlorosoma suillum PS Dsui_1027 RNA methyltransferase, RsmD family insig. 45 88
o Variovorax sp. SCN45 GFF2320 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 49 90
o Castellaniella sp019104865 MT123 ABCV34_RS10145 RsmD family RNA methyltransferase insig. 44 87
o Variovorax sp. OAS795 ABID97_RS23860 RsmD family RNA methyltransferase strong 49 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 40 92
o Pectobacterium carotovorum WPP14 HER17_RS00465 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 43 88
o Dickeya dadantii 3937 DDA3937_RS00630 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 41 89
o Dickeya dianthicola 67-19 HGI48_RS20760 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 42 89
o Kangiella aquimarina DSM 16071 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) sig. 34 99
o Dickeya dianthicola ME23 DZA65_RS21770 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 42 89
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12795 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase no data 39 93
o Erwinia tracheiphila SCR3 LU632_RS19285 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 39 92
o Methylophilus sp. DMC18 GFF765 Ribosomal RNA small subunit methyltransferase D insig. 43 87
  Alteromonas macleodii MIT1002 MIT1002_03683 Ribosomal RNA small subunit methyltransferase D sig. 42 82
  Lysobacter sp. OAE881 ABIE51_RS15125 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 41 95
o Shewanella amazonensis SB2B Sama_3469 hypothetical protein (RefSeq) strong 38 99
o Shewanella sp. ANA-3 Shewana3_3973 putative methyltransferase (RefSeq) strong 38 81
o Marinobacter adhaerens HP15 HP15_3491 conserved hypothetical protein sig. 37 98
  Pantoea sp. MT58 IAI47_01535 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 52 56
o Rahnella sp. WP5 EX31_RS14835 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 43 88
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS01535 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 52 56
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2153.1 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) sig. 52 56
o Acinetobacter baumannii LAC-4 RR41_RS09020 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD no data 41 86
o Pseudomonas aeruginosa MRSN321 PFGADD_00378 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 39 94
o Pseudomonas aeruginosa PA14 IKLFDK_23575 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 39 94
o Pseudomonas aeruginosa PUPa3 NPBIFN_00382 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 39 94
o Acinetobacter radioresistens SK82 MPMX26_02312 Ribosomal RNA small subunit methyltransferase D cofit 39 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00238 Ribosomal RNA small subunit methyltransferase D cofit 40 88
  Serratia liquefaciens MT49 IAI46_00920 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 46 67
o Escherichia coli BL21 ECD_03314 16S rRNA m(2)G966 methyltransferase, SAM-dependent sig. 40 88
o Erwinia amylovora T8 OLJFJH_04385 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 40 88
o Escherichia coli ECOR27 NOLOHH_08500 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase strong 40 88
o Escherichia coli ECRC62 BNILDI_03015 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 40 88
o Escherichia coli Nissle 1917 ECOLIN_RS19815 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 40 88
o Escherichia coli BW25113 b3465 yhhF predicted methyltransferase (NCBI) strong 40 88
  Shewanella loihica PV-4 Shew_3607 putative methyltransferase (RefSeq) strong 47 56
o Escherichia coli ECOR38 HEPCGN_15525 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase strong 40 88
o Escherichia coli ECRC100 OKFHMN_16695 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 39 88
o Escherichia coli ECRC101 MCAODC_07225 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 39 88
o Escherichia coli ECRC102 NIAGMN_14465 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase cofit 39 88
o Escherichia coli ECRC98 JDDGAC_20325 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 39 88
o Escherichia coli ECRC99 KEDOAH_11445 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase no data 39 88
o Escherichia fergusonii Becca EFB2_00351 Ribosomal RNA small subunit methyltransferase D cofit 40 88
  Shewanella oneidensis MR-1 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) strong 39 71
o Pseudomonas sp. SVBP6 COO64_RS12895 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 35 94
o Rhodanobacter denitrificans MT42 LRK55_RS13080 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 42 89
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13340 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 42 89
o Pseudomonas sp. RS175 PFR28_04262 Ribosomal RNA small subunit methyltransferase D strong 38 88
o Pseudomonas stutzeri RCH2 Psest_0255 RNA methyltransferase, RsmD family no data 36 88
o Pseudomonas fluorescens FW300-N2E3 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 38 88
  Klebsiella michiganensis M5al BWI76_RS26405 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 49 56
o Pseudomonas segetis P6 ACVTMO_RS21925 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 38 88
o Pseudomonas simiae WCS417 PS417_26825 16S rRNA methyltransferase no data 37 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) strong 36 99
  Enterobacter asburiae PDN3 EX28DRAFT_4299 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 48 57
  Enterobacter sp. TBS_079 MPMX20_04342 Ribosomal RNA small subunit methyltransferase D sig. 48 57
o Pseudomonas sp. DMC3 GFF229 Ribosomal RNA small subunit methyltransferase D cofit 36 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no data 37 89
  Pseudomonas fluorescens FW300-N2C3 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 36 99
  Pseudomonas sp. S08-1 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 33 95
  Klebsiella pneumoniae MKP103 KDGMDA_07265 16S rRNA (guanine(966)-N(2))-methyltransferase sig. 39 88
  Klebsiella pneumoniae MRSN742743 GJGHJB_00285 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase insig. 39 88
  Pseudomonas protegens RBAN4 FABNJH_29540 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 34 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) sig. 36 88
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF540 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 47 56
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05502 Ribosomal RNA small subunit methyltransferase D cofit 36 96
  Rhodanobacter sp. FW510-T8 OKGIIK_02580 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 43 89
  Pseudomonas syringae pv. syringae B728a Psyr_4754 16S rRNA m(2)G-966 methyltransferase insig. 36 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4754 16S rRNA m(2)G-966 methyltransferase insig. 36 88
  Pseudomonas orientalis W4I3 QF045_RS01225 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 35 96
  Pseudomonas sp. BP01 JOY50_RS20810 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 34 94
  Pseudomonas fluorescens SBW25 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 36 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 36 96
  Pseudomonas putida KT2440 PP_5114 putative adenine methyltransferase strong 34 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19990 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 39 88
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15240 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 40 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0246 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 39 74
  Sphingobium sp. HT1-2 GFF1635 16S rRNA (guanine(966)-N(2))-methyltransferase (EC 2.1.1.171) insig. 42 55
  Phaeobacter inhibens DSM 17395 PGA1_c29260 ribosomal RNA small subunit methyltransferase D sig. 35 88
  Dinoroseobacter shibae DFL-12 Dshi_0115 putative methyltransferase (RefSeq) strong 42 68
  Desulfovibrio vulgaris Hildenborough JW710 DVU1531 methyltransferase, putative (TIGR) sig. 35 78
  Rhizobium sp. OAE497 ABIE40_RS03765 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD sig. 34 67
  Desulfovibrio vulgaris Miyazaki F DvMF_0172 methyltransferase (RefSeq) sig. 36 67
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04100 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 30 67
  Sinorhizobium meliloti 1021 SMc00902 hypothetical protein no data 34 73
  Caulobacter crescentus NA1000 CCNA_00227 methyltransferase strong 34 73
  Caulobacter crescentus NA1000 Δfur CCNA_00227 methyltransferase insig. 34 73
  Azospirillum brasilense Sp245 AZOBR_RS04500 methyltransferase no data 38 67
  Xanthobacter sp. DMC5 GFF107 Ribosomal RNA small subunit methyltransferase D insig. 39 61
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 34 70
  Rhodopseudomonas palustris CGA009 TX73_005985 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 36 68
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12725 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 33 67
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07045 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 32 67
  Rhodospirillum rubrum S1H Rru_A0653 hypothetical protein (NCBI) no data 40 67
  Agrobacterium fabrum C58 Atu0690 hypothetical protein sig. 35 61
  Bosea sp. OAE506 ABIE41_RS23215 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD insig. 36 67
  Mycobacterium tuberculosis H37Rv Rv2966c Possible methyltransferase (methylase) no data 39 56
  Fusobacterium nucleatum SB010 HUW76_03595 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 29 67
  Phocaeicola dorei CL03T12C01 ABI39_RS09675 RsmD family RNA methyltransferase insig. 29 64
  Bacteroides stercoris CC31F HMPREF1181_RS09245 RsmD family RNA methyltransferase insig. 29 68
  Synechococcus elongatus PCC 7942 Synpcc7942_1480 hypothetical protein strong 31 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14025 RsmD family RNA methyltransferase strong 29 64
  Azospirillum sp. SherDot2 MPMX19_01626 Ribosomal RNA small subunit methyltransferase D no data 32 67
  Bacteroides ovatus ATCC 8483 BACOVA_04638 putative RNA methyltransferase, RsmD family cofit 29 67
  Bacteroides thetaiotaomicron VPI-5482 BT3979 putative methyltransferase (NCBI ptt file) sig. 29 68
  Magnetospirillum magneticum AMB-1 AMB_RS20860 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD cofit 42 38
  Bifidobacterium breve UCC2003 BBR_RS19290 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 37 56
  Cellulophaga baltica 18 M666_RS11520 RsmD family RNA methyltransferase insig. 30 62
  Synechocystis sp000284455 PCC 6803 SGL_RS12970 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD strong 25 89
  Rhodopseudomonas palustris CGA009 TX73_007945 magnesium protoporphyrin IX methyltransferase no data 36 37
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) insig. 32 50
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) insig. 32 50
  Bosea sp. OAE506 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 33 47
  Pseudomonas sp. SVBP6 COO64_RS02900 methyltransferase insig. 32 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) insig. 32 50
  Pseudomonas fluorescens FW300-N2E3 AO353_13950 50S rRNA methyltransferase insig. 32 50
  Pseudomonas sp. RS175 PFR28_03798 Ribosomal RNA large subunit methyltransferase G insig. 31 50
  Rhodospirillum rubrum S1H Rru_A0619 Magnesium protoporphyrin O-methyltransferase (NCBI) cofit 45 22
  Pseudomonas fluorescens FW300-N2C3 AO356_15650 50S rRNA methyltransferase insig. 32 50
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05020 Ribosomal RNA large subunit methyltransferase G insig. 32 50
  Pseudomonas sp. DMC3 GFF3948 Ribosomal RNA large subunit methyltransferase G cofit 32 50
  Pseudomonas stutzeri RCH2 Psest_3440 16S RNA G1207 methylase RsmC insig. 32 50
  Pseudomonas syringae pv. syringae B728a Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase insig. 32 50
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase insig. 32 50
  Pseudomonas orientalis W4I3 QF045_RS26630 class I SAM-dependent methyltransferase insig. 31 50
  Pseudomonas sp. BP01 JOY50_RS15705 methyltransferase insig. 29 50
  Pseudomonas fluorescens SBW25 PFLU_RS26260 class I SAM-dependent methyltransferase insig. 32 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26260 class I SAM-dependent methyltransferase insig. 32 50
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3335.1 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) insig. 30 50
  Shewanella sp. ANA-3 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) strong 30 39