Homologs of Shew_3734 from Shewanella loihica PV-4

DNA protecting protein DprA (RefSeq)
SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
KEGG: DNA processing protein

139 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_3734 DNA protecting protein DprA (RefSeq) insig. 100 100
o Shewanella oneidensis MR-1 SO0034 DNA processing protein DprA, putative (NCBI ptt file) insig. 67 100
o Shewanella sp. ANA-3 Shewana3_0037 DNA protecting protein DprA (RefSeq) insig. 67 100
o Shewanella amazonensis SB2B Sama_0045 DNA processing protein DprA, putative (RefSeq) insig. 60 100
o Pectobacterium carotovorum WPP14 HER17_RS02230 DNA-protecting protein DprA insig. 48 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_00245 DNA-protecting protein DprA insig. 50 89
o Enterobacter asburiae PDN3 EX28DRAFT_0042 DNA protecting protein DprA insig. 46 96
o Kangiella aquimarina DSM 16071 B158DRAFT_0400 DNA protecting protein DprA insig. 46 90
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12485 dprA DNA-protecting protein DprA cofit 46 91
o Enterobacter sp. TBS_079 MPMX20_04193 hypothetical protein insig. 46 87
o Erwinia amylovora T8 OLJFJH_03705 DNA-protecting protein DprA insig. 43 96
o Pantoea sp. MT58 IAI47_02295 DNA-protecting protein DprA insig. 45 88
o Erwinia tracheiphila SCR3 LU632_RS22465 dprA DNA-protecting protein DprA insig. 45 91
o Alteromonas macleodii MIT1002 MIT1002_00022 DNA protecting protein DprA insig. 43 97
  Dickeya dianthicola ME23 DZA65_RS20335 DNA-protecting protein DprA insig. 46 87
o Klebsiella michiganensis M5al BWI76_RS25665 DNA-processing protein DprA insig. 45 90
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS02310 dprA DNA-protecting protein DprA cofit 44 90
  Dickeya dianthicola 67-19 HGI48_RS19210 DNA-protecting protein DprA insig. 45 87
  Dickeya dadantii 3937 DDA3937_RS19120 DNA-protecting protein DprA insig. 46 87
o Escherichia coli ECOR38 HEPCGN_16365 dprA DNA-protecting protein DprA insig. 44 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 95
o Escherichia fergusonii Becca EFB2_00538 hypothetical protein insig. 44 96
o Escherichia coli Nissle 1917 ECOLIN_RS18860 DNA-protecting protein DprA insig. 44 96
o Escherichia coli BL21 ECD_03136 DNA recombination-mediator A family protein insig. 44 96
o Escherichia coli ECRC101 MCAODC_08065 dprA DNA-protecting protein DprA insig. 44 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00418 hypothetical protein insig. 44 96
o Escherichia coli BW25113 b4473 smf hypothetical protein (NCBI) insig. 44 96
o Escherichia coli ECRC102 NIAGMN_15305 dprA DNA-protecting protein DprA insig. 44 96
o Escherichia coli ECRC98 JDDGAC_21165 dprA DNA-protecting protein DprA insig. 44 96
o Escherichia coli ECRC99 KEDOAH_10605 dprA DNA-protecting protein DprA no data 44 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 43 93
o Escherichia coli ECRC62 BNILDI_02185 dprA DNA-protecting protein DprA cofit 43 96
o Escherichia coli ECOR27 NOLOHH_09335 dprA DNA-protecting protein DprA insig. 43 96
o Serratia liquefaciens MT49 IAI46_23260 DNA-protecting protein DprA insig. 45 89
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09755 DNA-protecting protein DprA insig. 42 94
o Ralstonia solanacearum UW163 UW163_RS03825 DNA-protecting protein DprA insig. 42 94
  Pseudomonas sp. RS175 PFR28_04659 hypothetical protein insig. 47 91
o Ralstonia solanacearum PSI07 RPSI07_RS23610 DNA-protecting protein DprA sig. 42 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS04985 DNA-processing protein DprA insig. 41 94
o Rahnella sp. WP5 EX31_RS15970 DNA-protecting protein DprA cofit 43 95
  Pseudomonas stutzeri RCH2 Psest_0025 DNA protecting protein DprA sig. 46 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 89
o Ralstonia solanacearum GMI1000 RS_RS00340 DNA-protecting protein DprA insig. 42 94
  Methylophilus sp. DMC18 GFF1494 hypothetical protein insig. 43 91
  Klebsiella pneumoniae MRSN742743 KFA93_RS24750 dprA;go_process=DNA-mediated DNA-protecting protein DprA insig. 44 87
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13870 DNA-processing protein DprA insig. 45 86
  Klebsiella pneumoniae MKP103 KDGMDA_06535 DNA-protecting protein DprA insig. 44 87
  Cupriavidus basilensis FW507-4G11 RR42_RS20480 DNA processing protein DprA insig. 42 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00227 hypothetical protein insig. 44 94
  Pseudomonas orientalis W4I3 QF045_RS03040 DNA-processing protein DprA insig. 44 94
o Rhodanobacter denitrificans MT42 LRK55_RS09785 DNA-processing protein DprA insig. 41 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10145 DNA-processing protein DprA sig. 41 91
  Pseudomonas fluorescens SBW25 PFLU_RS00100 DNA-protecting protein DprA cofit 46 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00100 DNA-protecting protein DprA insig. 46 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4125 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 91
o Rhodanobacter sp. FW510-T8 OKGIIK_13770 dprA DNA-processing protein DprA insig. 42 95
  Castellaniella sp019104865 MT123 ABCV34_RS14195 DNA-processing protein DprA insig. 44 90
  Herbaspirillum seropedicae SmR1 HSERO_RS23400 DNA processing protein DprA insig. 49 71
o Paraburkholderia sabiae LMG 24235 QEN71_RS00150 DNA-processing protein DprA insig. 41 92
  Pseudomonas fluorescens FW300-N2C3 AO356_11295 DNA processing protein DprA insig. 44 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1910 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 44 91
  Pseudomonas syringae pv. syringae B728a Psyr_0021 DNA protecting protein DprA insig. 45 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0021 DNA protecting protein DprA insig. 45 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_648 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 45 85
  Pseudomonas sp. S08-1 OH686_12505 DNA protecting protein DprA insig. 45 88
  Pseudomonas segetis P6 ACVTMO_RS01365 dprA DNA-processing protein DprA insig. 44 89
  Pseudomonas fluorescens FW300-N2E3 AO353_10650 DNA processing protein DprA insig. 44 91
  Pseudomonas protegens RBAN4 FABNJH_00130 dprA DNA-processing protein DprA insig. 44 91
  Pseudomonas aeruginosa MRSN321 DY961_RS26305 dprA;go_process=DNA-mediated DNA-processing protein DprA insig. 49 71
  Pseudomonas aeruginosa PA14 IKLFDK_25455 DNA-processing protein DprA insig. 49 71
  Pseudomonas aeruginosa PUPa3 DQ20_RS58710 dprA;go_process=DNA-mediated DNA-processing protein DprA sig. 49 71
o Variovorax sp. OAS795 ABID97_RS01830 DNA-processing protein DprA insig. 41 89
o Dechlorosoma suillum PS Dsui_0819 DNA protecting protein DprA cofit 43 89
  Pseudomonas sp. DMC3 GFF594 hypothetical protein cofit 44 85
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02242 DNA protecting protein DprA insig. 39 90
  Acidovorax sp. GW101-3H11 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 42 86
  Pseudomonas sp. SVBP6 COO64_RS02230 dprA DNA-processing protein DprA insig. 44 88
  Pseudomonas putida KT2440 PP_0069 putative Rossmann fold nucleotide-binding protein sig. 41 94
  Pseudomonas sp. BP01 JOY50_RS08235 dprA DNA-processing protein DprA insig. 43 88
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02925 DNA-processing protein DprA insig. 41 89
  Burkholderia phytofirmans PsJN BPHYT_RS01450 DNA-binding protein insig. 36 90
  Marinobacter adhaerens HP15 HP15_3746 DNA protecting protein DprA insig. 50 62
o Lysobacter sp. OAE881 ABIE51_RS02235 DNA-processing protein DprA insig. 40 89
  Acinetobacter radioresistens SK82 MPMX26_00114 hypothetical protein insig. 41 85
  Acinetobacter baumannii LAC-4 RR41_RS18085 DNA-processing protein DprA insig. 42 85
  Paraburkholderia graminis OAS925 ABIE53_000387 DNA processing protein insig. 46 68
o Variovorax sp. SCN45 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake insig. 40 91
  Azospirillum brasilense Sp245 AZOBR_RS15885 DNA processing protein DprA insig. 42 85
  Magnetospirillum magneticum AMB-1 AMB_RS03500 DNA-protecting protein DprA cofit 43 82
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04240 DNA-processing protein DprA insig. 41 95
  Caulobacter crescentus NA1000 CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 47 67
  Caulobacter crescentus NA1000 Δfur CCNA_02529 DNA recombination-mediator protein A, SMF family insig. 47 67
o Sphingobium sp. HT1-2 GFF113 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake cofit 41 83
  Desulfovibrio vulgaris Miyazaki F DvMF_0771 DNA protecting protein DprA (RefSeq) insig. 47 62
  Fusobacterium nucleatum SB010 HUW76_06810 DNA-protecting protein DprA strong 34 84
  Rhodopseudomonas palustris CGA009 TX73_016135 DNA-processing protein DprA insig. 42 85
  Azospirillum sp. SherDot2 MPMX19_01508 hypothetical protein insig. 42 85
  Escherichia coli ECRC100 OKFHMN_17535 dprA DNA-protecting protein DprA insig. 44 72
  Rhizobium sp. OAE497 ABIE40_RS07365 DNA-processing protein DprA insig. 41 82
  Desulfovibrio vulgaris Hildenborough JW710 DVU2069 dprA DNA processing protein DprA, putative (TIGR) insig. 49 62
  Xanthobacter sp. DMC5 GFF932 hypothetical protein insig. 41 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2448 DNA protecting protein DprA insig. 47 60
  Bosea sp. OAE506 ABIE41_RS17215 DNA-processing protein DprA insig. 36 84
  Synechocystis sp000284455 PCC 6803 SGL_RS05985 DNA-processing protein DprA insig. 34 86
  Rhodospirillum rubrum S1H Rru_A3194 SMF protein (NCBI) insig. 38 82
  Sinorhizobium meliloti 1021 SMc01363 hypothetical protein insig. 37 82
  Dinoroseobacter shibae DFL-12 Dshi_1138 DNA protecting protein DprA (RefSeq) insig. 39 83
  Agrobacterium fabrum C58 Atu1305 DNA processing chain A insig. 38 82
  Phaeobacter inhibens DSM 17395 PGA1_c06230 putative protein Smf insig. 46 65
  Synechococcus elongatus PCC 7942 Synpcc7942_0703 smf DNA processing protein DprA, putative insig. 34 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3854 DNA protecting protein DprA insig. 35 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13955 DNA-processing protein DprA insig. 32 83
  Bacteroides thetaiotaomicron VPI-5482 BT3070 Smf protein DNA processing chain A (NCBI ptt file) insig. 33 85
  Phocaeicola dorei CL03T12C01 ABI39_RS05220 DNA-processing protein DprA insig. 31 94
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06145 DNA protecting protein DprA insig. 36 62
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04370 DNA protecting protein DprA insig. 31 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11685 DNA-protecting protein DprA insig. 31 94
  Cellulophaga baltica 18 M666_RS05300 DNA-processing protein DprA insig. 31 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05335 DNA-processing protein DprA insig. 31 83
  Bacteroides ovatus ATCC 8483 BACOVA_02721 DNA protecting protein DprA insig. 29 99
  Bacteroides stercoris CC31F HMPREF1181_RS01510 DNA-protecting protein DprA insig. 36 61
  Mycobacterium tuberculosis H37Rv Rv2896c Conserved hypothetical protein insig. 41 54
  Bifidobacterium breve UCC2003 BBR_RS14565 DNA-processing protein DprA insig. 34 66
  Bifidobacterium breve UCC2003 BBR_RS18365 DNA-processing protein DprA no data 37 50
  Pseudomonas aeruginosa PUPa3 DQ20_RS60845 DNA-processing protein DprA no data 30 60
  Fusobacterium nucleatum SB010 HUW76_07255 DNA-protecting protein DprA cofit 32 49
  Bacteroides ovatus ATCC 8483 BACOVA_02336 putative DNA protecting protein DprA strong 30 47
  Pseudomonas syringae pv. syringae B728a Psyr_3805 hypothetical protein sig. 28 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3805 hypothetical protein insig. 28 61
  Escherichia coli ECOR38 HEPCGN_15680 smf DNA processing protein DprA insig. 33 52
  Escherichia coli ECRC100 OKFHMN_16865 smf DNA processing protein DprA insig. 33 52
  Escherichia coli ECRC101 MCAODC_07395 smf DNA processing protein DprA insig. 33 52
  Escherichia coli ECRC102 NIAGMN_14635 smf DNA processing protein DprA insig. 33 52
  Escherichia coli ECRC98 JDDGAC_20495 smf DNA processing protein DprA insig. 33 52
  Escherichia coli ECRC99 KEDOAH_11275 smf DNA processing protein DprA no data 33 52
  Escherichia coli Nissle 1917 ECOLIN_RS19655 DNA-processing protein DprA insig. 32 52
  Escherichia coli ECOR27 NOLOHH_08655 smf DNA processing protein DprA insig. 32 52
  Klebsiella michiganensis M5al BWI76_RS26225 DNA processing protein DprA insig. 33 52
  Acinetobacter baumannii LAC-4 RR41_RS09535 DNA-processing protein DprA no data 27 49