Homologs of clpP from Shewanella loihica PV-4

clpP: ATP-dependent Clp protease proteolytic subunit (RefSeq)
SEED: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
KEGG: ATP-dependent Clp protease, protease subunit

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2508 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) insig. 100 100
o Shewanella amazonensis SB2B Sama_1224 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) strong 92 100
o Shewanella oneidensis MR-1 SO1794 clpP ATP-dependent Clp protease, proteolytic subunit (NCBI ptt file) strong 91 100
o Shewanella sp. ANA-3 Shewana3_2661 clpP ATP-dependent Clp protease proteolytic subunit (RefSeq) strong 89 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_09615 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 84 100
o Alteromonas macleodii MIT1002 MIT1002_02760 ATP-dependent Clp protease proteolytic subunit precursor strong 81 100
o Pseudomonas putida KT2440 PP_2300 ATP-dependent Clp protease proteolytic subunit no data 83 94
o Pseudomonas sp. BP01 JOY50_RS25915 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 82 94
o Pseudomonas syringae pv. syringae B728a Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP strong 79 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP sig. 79 99
o Pseudomonas sp. SVBP6 COO64_RS19195 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 82 94
o Pseudomonas sp. RS175 PFR28_01228 ATP-dependent Clp protease proteolytic subunit no data 81 94
o Pseudomonas fluorescens FW300-N2C3 AO356_01750 ATP-dependent Clp protease proteolytic subunit strong 81 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2218 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 81 94
o Pseudomonas fluorescens FW300-N2E3 AO353_20175 ATP-dependent Clp protease proteolytic subunit strong 82 94
o Dickeya dadantii 3937 DDA3937_RS05640 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 80 95
o Pseudomonas segetis P6 MPMX49_02261 ATP-dependent Clp protease proteolytic subunit no data 78 100
o Dickeya dianthicola 67-19 HGI48_RS05685 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 79 95
o Dickeya dianthicola ME23 DZA65_RS06010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 79 95
o Pectobacterium carotovorum WPP14 HER17_RS15850 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 78 95
o Enterobacter asburiae PDN3 EX28DRAFT_2534 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 79 95
o Pantoea sp. MT58 IAI47_14655 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 78 95
o Enterobacter sp. TBS_079 MPMX20_01028 ATP-dependent Clp protease proteolytic subunit cofit 79 95
o Klebsiella michiganensis M5al BWI76_RS06525 ATP-dependent Clp protease proteolytic subunit strong 78 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10540 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 78 95
o Klebsiella pneumoniae MKP103 KDGMDA_14605 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4353 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 78 95
o Marinobacter adhaerens HP15 HP15_2185 ATP-dependent Clp protease, proteolytic subunit ClpP no data 79 95
o Escherichia coli BL21 ECD_00388 proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases strong 78 95
o Escherichia fergusonii Becca EFB2_03620 ATP-dependent Clp protease proteolytic subunit sig. 78 95
o Escherichia coli ECOR27 NOLOHH_01270 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
o Escherichia coli ECOR38 HEPCGN_06950 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
o Escherichia coli ECRC100 OKFHMN_08335 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 78 95
o Escherichia coli ECRC101 MCAODC_27560 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
o Escherichia coli ECRC102 NIAGMN_06390 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
o Escherichia coli ECRC62 BNILDI_22685 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
o Escherichia coli ECRC98 JDDGAC_11990 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
o Escherichia coli ECRC99 KEDOAH_19630 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 78 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03236 ATP-dependent Clp protease proteolytic subunit strong 78 95
o Escherichia coli Nissle 1917 ECOLIN_RS02625 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 78 95
o Escherichia coli BW25113 b0437 clpP ATP-dependent Clp protease proteolytic subunit (NCBI) strong 78 95
o Erwinia amylovora T8 OLJFJH_17980 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 78 95
o Serratia liquefaciens MT49 IAI46_05010 ATP-dependent Clp endopeptidase proteolytic subunit ClpP cofit 77 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03743 ATP-dependent Clp protease proteolytic subunit no data 77 99
o Pseudomonas orientalis W4I3 QF045_RS18900 ATP-dependent Clp endopeptidase proteolytic subunit ClpP cofit 77 99
o Rahnella sp. WP5 EX31_RS22245 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 77 95
o Pseudomonas fluorescens SBW25 PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 77 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19170 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 77 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1034 ATP-dependent Clp protease, proteolytic subunit ClpP strong 74 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3945 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 76 99
o Erwinia tracheiphila SCR3 LU632_RS18345 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 76 95
o Pseudomonas sp. DMC3 GFF1443 ATP-dependent Clp protease proteolytic subunit cofit 76 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_16440 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 73 99
o Pseudomonas simiae WCS417 PS417_17235 Clp protease ClpP no data 76 99
o Pseudomonas stutzeri RCH2 Psest_2287 ATP-dependent Clp protease, proteolytic subunit ClpP no data 77 94
o Acinetobacter baumannii LAC-4 RR41_RS16565 ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 76 97
o Acinetobacter radioresistens SK82 MPMX26_00408 ATP-dependent Clp protease proteolytic subunit strong 76 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2552 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 79 93
o Lysobacter sp. OAE881 ABIE51_RS14155 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 76 94
o Methylophilus sp. DMC18 GFF1303 ATP-dependent Clp protease proteolytic subunit no data 78 94
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4048.1 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 75 94
o Dechlorosoma suillum PS Dsui_2196 ATP-dependent Clp protease, proteolytic subunit ClpP strong 74 94
o Pseudomonas aeruginosa MRSN321 DY961_RS20730 clpP;go_component=endopeptidase ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 80 94
o Pseudomonas aeruginosa PA14 IKLFDK_08750 ATP-dependent Clp endopeptidase proteolytic subunit ClpP cofit 80 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS54810 clpP;go_component=endopeptidase ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 80 94
o Pseudomonas sp. S08-1 OH686_03645 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 79 94
o Herbaspirillum seropedicae SmR1 HSERO_RS12915 Clp protease proteolytic subunit ClpP no data 72 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS21985 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 75 94
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00896 ATP-dependent Clp protease proteolytic subunit ClpP sig. 75 94
o Paraburkholderia graminis OAS925 ABIE53_002115 ATP-dependent Clp protease protease subunit strong 75 94
o Rhodanobacter sp. FW510-T8 OKGIIK_08040 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 75 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01350 ATP-dependent Clp protease proteolytic subunit no data 73 95
o Ralstonia solanacearum GMI1000 RS_RS08645 ATP-dependent Clp protease proteolytic subunit no data 73 95
o Ralstonia solanacearum PSI07 RPSI07_RS16125 ATP-dependent Clp protease proteolytic subunit insig. 73 95
o Ralstonia solanacearum UW163 UW163_RS14660 ATP-dependent Clp protease proteolytic subunit no data 73 95
o Rhodanobacter denitrificans MT42 LRK55_RS16450 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 76 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16725 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 76 95
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12145 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 75 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4042 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) strong 74 94
o Burkholderia phytofirmans PsJN BPHYT_RS09450 ATP-dependent Clp protease proteolytic subunit 2 no data 75 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS12795 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 73 94
o Acidovorax sp. GW101-3H11 Ac3H11_935 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) no data 74 94
o Cupriavidus basilensis FW507-4G11 RR42_RS09020 Clp protease ClpP no data 71 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07330 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 72 95
o Variovorax sp. SCN45 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) strong 70 95
o Variovorax sp. OAS795 ABID97_RS17600 ATP-dependent Clp endopeptidase proteolytic subunit ClpP strong 71 94
o Magnetospirillum magneticum AMB-1 AMB_RS14045 ATP-dependent Clp endopeptidase, proteolytic subunit ClpP no data 68 96
o Xanthobacter sp. DMC5 GFF1158 ATP-dependent Clp protease proteolytic subunit no data 64 100
o Rhodospirillum rubrum S1H Rru_A1550 Endopeptidase Clp (NCBI) no data 68 96
o Castellaniella sp019104865 MT123 ABCV34_RS05135 ATP-dependent Clp endopeptidase proteolytic subunit ClpP no data 72 94
o Sphingobium sp. HT1-2 GFF4054 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no data 64 100
o Azospirillum brasilense Sp245 AZOBR_RS07135 ATP-dependent Clp protease proteolytic subunit no data 67 97
o Rhizobium sp. OAE497 ABIE40_RS07090 ATP-dependent Clp endopeptidase proteolytic subunit ClpP sig. 65 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS02860 ATP-dependent Clp endopeptidase proteolytic subunit ClpP insig. 69 94
o Azospirillum sp. SherDot2 MPMX19_01548 ATP-dependent Clp protease proteolytic subunit no data 67 97
o Sinorhizobium meliloti 1021 SMc01903 ATP-dependent Clp protease proteolytic subunit no data 65 100
o Agrobacterium fabrum C58 Atu1258 ATP-dependent Clp protease, proteolytic subunit strong 63 100
  Burkholderia phytofirmans PsJN BPHYT_RS15840 Clp protease proteolytic subunit ClpP insig. 65 99
  Paraburkholderia graminis OAS925 ABIE53_003339 ATP-dependent Clp protease protease subunit insig. 67 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04105 ATP-dependent Clp protease proteolytic subunit ClpP insig. 67 95