Homologs of BT4008 from Bacteroides thetaiotaomicron VPI-5482

conserved hypothetical protein (NCBI ptt file)
KEGG: ribosome-associated protein

123 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Bacteroides thetaiotaomicron VPI-5482 BT4008 conserved hypothetical protein (NCBI ptt file) strong 100 100
o Bacteroides ovatus ATCC 8483 BACOVA_04827 iojap-like protein strong 92 100
o Phocaeicola dorei CL03T12C01 ABI39_RS09760 ribosome silencing factor insig. 82 100
o Bacteroides stercoris CC31F HMPREF1181_RS09150 ribosome silencing factor strong 82 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14110 ribosome silencing factor insig. 82 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16245 ribosome silencing factor sig. 57 100
o Cellulophaga baltica 18 M666_RS08955 ribosome silencing factor insig. 50 93
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2428 iojap-like ribosome-associated protein sig. 43 89
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20060 ribosome silencing factor RsfS strong 40 95
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21000 ribosome silencing factor strong 45 84
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20165 ribosome silencing factor strong 40 92
  Synechocystis sp000284455 PCC 6803 SGL_RS07700 ribosome silencing factor strong 36 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09060 ribosome silencing factor no data 40 88
  Acinetobacter baumannii LAC-4 RR41_RS16120 ribosome silencing factor no data 38 88
  Acinetobacter radioresistens SK82 MPMX26_00531 Ribosomal silencing factor RsfS strong 41 84
  Magnetospirillum magneticum AMB-1 AMB_RS23800 ribosome silencing factor insig. 45 79
  Rhodanobacter denitrificans MT42 LRK55_RS02455 ribosome silencing factor insig. 38 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02700 ribosome silencing factor sig. 38 87
  Rhodanobacter sp. FW510-T8 OKGIIK_09755 rsfS ribosome silencing factor cofit 38 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1874.1 Iojap protein insig. 40 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07245 ribosome silencing factor insig. 38 87
  Synechococcus elongatus PCC 7942 Synpcc7942_0164 Iojap-related protein strong 36 80
o Alteromonas macleodii MIT1002 MIT1002_01853 Ribosomal silencing factor RsfS insig. 37 89
o Pseudomonas aeruginosa MRSN321 PFGADD_00952 rsfS ribosome silencing factor sig. 34 91
o Pseudomonas aeruginosa PA14 IKLFDK_20655 ribosome silencing factor sig. 34 91
o Methylophilus sp. DMC18 GFF826 Ribosomal silencing factor RsfS cofit 33 83
o Pseudomonas aeruginosa PUPa3 NPBIFN_00957 rsfS ribosome silencing factor sig. 34 91
  Pseudomonas syringae pv. syringae B728a Psyr_4367 Iojap-related protein insig. 37 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4367 Iojap-related protein insig. 37 85
o Xanthobacter sp. DMC5 GFF3948 Ribosomal silencing factor RsfS insig. 36 91
  Sphingobium sp. HT1-2 GFF750 Ribosomal silencing factor RsfA cofit 44 65
  Lysobacter sp. OAE881 ABIE51_RS06745 ribosome silencing factor insig. 39 86
  Pseudomonas fluorescens FW300-N2E3 AO353_06485 ribosome silencing factor no data 33 87
  Caulobacter crescentus NA1000 CCNA_03545 iojap protein family no data 34 89
  Caulobacter crescentus NA1000 Δfur CCNA_03545 iojap protein family no data 34 89
o Pantoea sp. MT58 IAI47_14015 ribosome silencing factor sig. 37 87
  Cupriavidus basilensis FW507-4G11 RR42_RS04715 ribosome silencing factor RsfS insig. 34 90
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2504 ribosome silencing factor RsfS/YbeB/iojap strong 42 65
  Pseudomonas sp. DMC3 GFF3878 Ribosomal silencing factor RsfS no data 34 87
  Dechlorosoma suillum PS Dsui_0452 iojap-like ribosome-associated protein insig. 36 79
  Pseudomonas segetis P6 ACVTMO_RS05205 rsfS ribosome silencing factor insig. 35 79
  Pseudomonas putida KT2440 PP_4809 Ribosomal silencing factor RsfS no data 31 93
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS14125 rsfS ribosome silencing factor cofit 36 87
  Pseudomonas fluorescens FW300-N2C3 AO356_15300 ribosome silencing factor no data 34 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4995 Iojap protein no data 34 85
o Rhodopseudomonas palustris CGA009 TX73_000865 ribosome silencing factor insig. 33 88
  Pseudomonas sp. BP01 JOY50_RS17690 rsfS ribosome silencing factor insig. 30 87
  Rhodospirillum rubrum S1H Rru_A1236 Iojap-related protein (NCBI) insig. 33 86
  Pseudomonas fluorescens SBW25 PFLU_RS26665 ribosome silencing factor no data 33 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26665 ribosome silencing factor no data 33 87
  Pseudomonas simiae WCS417 PS417_24735 ribosome-associated protein IOJAP no data 33 87
o Shewanella sp. ANA-3 Shewana3_0997 iojap-like protein (RefSeq) no data 33 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1358 Iojap protein no data 32 87
  Agrobacterium fabrum C58 Atu2777 hypothetical protein strong 31 90
  Sinorhizobium meliloti 1021 SMc03780 hypothetical protein sig. 31 85
  Pseudomonas sp. SVBP6 COO64_RS15620 rsfS ribosome silencing factor sig. 30 93
  Mycobacterium tuberculosis H37Rv Rv2420c Conserved hypothetical protein no data 35 79
o Shewanella oneidensis MR-1 SO1170 iojap domain protein (NCBI ptt file) sig. 33 82
  Pseudomonas protegens RBAN4 FABNJH_27540 rsfS ribosome silencing factor insig. 29 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14820 ribosome silencing factor cofit 32 86
  Pseudomonas sp. RS175 PFR28_03870 Ribosomal silencing factor RsfS no data 30 93
  Bosea sp. OAE506 ABIE41_RS07570 ribosome silencing factor insig. 34 79
  Dickeya dianthicola 67-19 HGI48_RS06225 ribosome silencing factor insig. 37 76
  Dickeya dianthicola ME23 DZA65_RS06570 ribosome silencing factor insig. 37 76
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05100 Ribosomal silencing factor RsfS no data 32 87
  Pseudomonas orientalis W4I3 QF045_RS27020 ribosome silencing factor cofit 32 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2690 Iojap protein no data 31 84
  Shewanella loihica PV-4 Shew_2933 iojap-like protein (RefSeq) no data 33 80
o Azospirillum brasilense Sp245 AZOBR_RS04065 ribosome-associated protein IOJAP insig. 29 87
  Erwinia amylovora T8 OLJFJH_17215 ribosome silencing factor insig. 37 79
o Pseudomonas stutzeri RCH2 Psest_0510 iojap-like ribosome-associated protein sig. 31 91
  Escherichia coli BL21 ECD_00606 ribosomal silencing factor cofit 36 79
  Escherichia fergusonii Becca EFB2_03455 Ribosomal silencing factor RsfS insig. 36 79
  Escherichia coli ECOR27 NOLOHH_23730 rsfS ribosome silencing factor strong 36 79
  Escherichia coli ECOR38 HEPCGN_00920 rsfS ribosome silencing factor sig. 36 79
  Escherichia coli ECRC100 OKFHMN_07355 rsfS ribosome silencing factor cofit 36 79
  Escherichia coli ECRC101 MCAODC_26570 rsfS ribosome silencing factor sig. 36 79
  Escherichia coli ECRC102 NIAGMN_05410 rsfS ribosome silencing factor insig. 36 79
  Escherichia coli ECRC62 BNILDI_21740 rsfS ribosome silencing factor cofit 36 79
  Escherichia coli ECRC98 JDDGAC_11000 rsfS ribosome silencing factor insig. 36 79
  Escherichia coli ECRC99 KEDOAH_20615 rsfS ribosome silencing factor no data 36 79
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03069 Ribosomal silencing factor RsfS insig. 36 79
  Escherichia coli Nissle 1917 ECOLIN_RS03470 ribosome silencing factor no data 36 79
  Escherichia coli BW25113 b0637 ybeB orf, hypothetical protein (VIMSS) no data 36 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4550 Iojap protein insig. 36 79
  Enterobacter sp. TBS_079 MPMX20_01296 Ribosomal silencing factor RsfS insig. 37 79
o Klebsiella michiganensis M5al BWI76_RS08045 ribosome silencing factor RsfS no data 35 87
  Pectobacterium carotovorum WPP14 HER17_RS15235 ribosome silencing factor insig. 41 63
  Variovorax sp. SCN45 GFF299 Ribosomal silencing factor RsfA cofit 29 91
  Dickeya dadantii 3937 DDA3937_RS06180 ribosome silencing factor insig. 36 76
  Klebsiella pneumoniae MKP103 KDGMDA_16405 ribosome silencing factor strong 35 79
  Klebsiella pneumoniae MRSN742743 GJGHJB_03580 rsfS ribosome silencing factor sig. 35 79
  Enterobacter asburiae PDN3 EX28DRAFT_2326 ribosome silencing factor RsfS/YbeB/iojap insig. 36 87
  Shewanella amazonensis SB2B Sama_2586 iojap domain-containing protein (RefSeq) sig. 34 80
  Dinoroseobacter shibae DFL-12 Dshi_0087 iojap-like protein (RefSeq) insig. 35 78
  Variovorax sp. OAS795 ABID97_RS16720 ribosome silencing factor insig. 29 91
  Marinobacter adhaerens HP15 HP15_603 Iojap-related protein sig. 31 88
  Rhizobium sp. OAE497 ABIE40_RS18960 ribosome silencing factor insig. 30 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4528 Iojap protein cofit 28 90
  Azospirillum sp. SherDot2 MPMX19_01941 Ribosomal silencing factor RsfS insig. 33 63
  Pseudomonas sp. S08-1 OH686_09330 ribosome silencing factor insig. 30 88
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_02455 rsfS ribosome silencing factor cofit 35 79
  Erwinia tracheiphila SCR3 LU632_RS16365 rsfS ribosome silencing factor insig. 35 79
  Kangiella aquimarina DSM 16071 B158DRAFT_0086 iojap-like ribosome-associated protein strong 32 78
  Ralstonia solanacearum GMI1000 RS_RS11010 ribosome silencing factor insig. 32 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS15425 ribosome silencing factor sig. 32 90
  Ralstonia solanacearum PSI07 RPSI07_RS13665 ribosome silencing factor insig. 32 90
  Phaeobacter inhibens DSM 17395 PGA1_c29760 iojap-like ribosome-associated protein sig. 29 87
  Acidovorax sp. GW101-3H11 Ac3H11_2419 Iojap protein strong 28 91
  Bifidobacterium breve UCC2003 BBR_RS14420 ribosome silencing factor insig. 34 73
  Herbaspirillum seropedicae SmR1 HSERO_RS17775 hypothetical protein no data 30 90
  Serratia liquefaciens MT49 IAI46_05940 ribosome silencing factor no data 33 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03560 ribosome silencing factor strong 32 90
  Ralstonia solanacearum UW163 UW163_RS10110 ribosome silencing factor insig. 32 90
  Castellaniella sp019104865 MT123 ABCV34_RS02535 ribosome silencing factor insig. 38 68
  Burkholderia phytofirmans PsJN BPHYT_RS06390 ribosome-associated protein IOJAP sig. 31 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04518 ribosome-associated protein insig. 29 90
  Paraburkholderia graminis OAS925 ABIE53_001542 ribosome-associated protein sig. 29 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS24415 ribosome silencing factor insig. 29 90
  Rahnella sp. WP5 EX31_RS23130 ribosome silencing factor insig. 34 76
  Vibrio cholerae E7946 ATCC 55056 CSW01_04870 ribosome silencing factor insig. 30 76
  Desulfovibrio vulgaris Hildenborough JW710 DVU1618 iojap-related protein (TIGR) no data 27 81
  Desulfovibrio vulgaris Miyazaki F DvMF_0440 iojap-like protein (RefSeq) strong 27 81