Homologs of DVU3070 from Desulfovibrio vulgaris Hildenborough JW710

conserved hypothetical protein (TIGR)
SEED: Putative Holliday junction resolvase YggF
KEGG: putative holliday junction resolvase

100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU3070 conserved hypothetical protein (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_2352 Holliday junction resolvase YqgF (RefSeq) no data 75 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04815 putative holliday junction resolvase no data 33 92
o Paraburkholderia graminis OAS925 ABIE53_001129 putative Holliday junction resolvase no data 35 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS25790 Holliday junction resolvase RuvX no data 34 92
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07050 Holliday junction resolvase RuvX no data 34 92
o Phocaeicola dorei CL03T12C01 ABI39_RS20940 Holliday junction resolvase RuvX no data 33 92
o Dechlorosoma suillum PS Dsui_0594 RNAse H-fold protein YqgF no data 32 91
o Burkholderia phytofirmans PsJN BPHYT_RS04225 Holliday junction resolvase no data 34 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18175 Holliday junction resolvase RuvX no data 34 99
o Variovorax sp. SCN45 GFF2158 Putative pre-16S rRNA nuclease YqgF no data 35 92
o Bacteroides stercoris CC31F HMPREF1181_RS04285 Holliday junction resolvase RuvX no data 32 97
o Bacteroides ovatus ATCC 8483 BACOVA_01773 Holliday junction resolvase-like protein no data 32 92
o Bacteroides thetaiotaomicron VPI-5482 BT0419 putative endonuclease (NCBI ptt file) no data 32 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS00200 Holliday junction resolvase RuvX insig. 34 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS08615 Holliday junction resolvase RuvX no data 34 92
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF649 Putative Holliday junction resolvase YggF no data 35 92
o Phaeobacter inhibens DSM 17395 PGA1_c19190 RNAse H-fold protein YqgF no data 33 90
  Bosea sp. OAE506 ABIE41_RS17195 Holliday junction resolvase RuvX no data 35 92
o Kangiella aquimarina DSM 16071 B158DRAFT_0192 RNAse H-fold protein YqgF no data 32 92
o Ralstonia solanacearum GMI1000 RS_RS03400 Holliday junction resolvase RuvX no data 32 92
  Sinorhizobium meliloti 1021 SMc01355 Holliday junction resolvase-like protein no data 33 90
o Synechococcus elongatus PCC 7942 Synpcc7942_2398 Holliday junction resolvase-like protein strong 29 91
o Ralstonia solanacearum PSI07 RPSI07_RS20645 Holliday junction resolvase RuvX no data 32 92
o Pseudomonas simiae WCS417 PS417_26690 Holliday junction resolvase no data 31 92
  Mycobacterium tuberculosis H37Rv Rv2554c Conserved protein no data 33 92
o Herbaspirillum seropedicae SmR1 HSERO_RS02320 Holliday junction resolvase no data 30 91
o Magnetospirillum magneticum AMB-1 AMB_RS08015 Holliday junction resolvase RuvX no data 33 92
o Pseudomonas fluorescens SBW25 PFLU_RS28335 Holliday junction resolvase RuvX no data 31 92
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28335 Holliday junction resolvase RuvX no data 31 92
o Pseudomonas sp. S08-1 OH686_10930 Putative pre-16S rRNA nuclease YqgF no data 33 92
o Rhodanobacter denitrificans MT42 LRK55_RS03985 Holliday junction resolvase RuvX no data 35 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04215 Holliday junction resolvase RuvX no data 35 92
o Bifidobacterium breve UCC2003 BBR_RS15065 Holliday junction resolvase RuvX no data 31 93
o Ralstonia solanacearum UW163 UW163_RS00950 Holliday junction resolvase RuvX no data 31 92
o Pseudomonas putida KT2440 PP_4996 Putative Holliday junction resolvase no data 31 92
  Rhizobium sp. OAE497 ABIE40_RS07415 Holliday junction resolvase RuvX no data 33 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12615 Holliday junction resolvase RuvX no data 31 92
o Pseudomonas fluorescens FW300-N2E3 AO353_08125 Holliday junction resolvase no data 31 92
o Acinetobacter radioresistens SK82 MPMX26_00237 Putative pre-16S rRNA nuclease no data 27 94
o Variovorax sp. OAS795 ABID97_RS24670 Holliday junction resolvase RuvX no data 35 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1018 Putative Holliday junction resolvase YggF no data 31 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2349 Putative Holliday junction resolvase YggF no data 31 92
o Pseudomonas fluorescens FW300-N2C3 AO356_13460 Holliday junction resolvase no data 31 92
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4608 Putative Holliday junction resolvase YggF no data 31 92
o Pseudomonas sp. RS175 PFR28_04235 Putative pre-16S rRNA nuclease no data 31 92
o Marinobacter adhaerens HP15 HP15_3509 Holliday junction resolvase no data 33 91
o Cupriavidus basilensis FW507-4G11 RR42_RS15870 Holliday junction DNA helicase no data 29 91
o Agrobacterium fabrum C58 Atu1316 hypothetical protein no data 35 90
o Pseudomonas syringae pv. syringae B728a Psyr_0484 Conserved hypothetical protein 250 no data 30 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0484 Conserved hypothetical protein 250 no data 30 92
o Acidovorax sp. GW101-3H11 Ac3H11_3980 Putative Holliday junction resolvase YqgF no data 35 70
o Shewanella oneidensis MR-1 SO3347 conserved hypothetical protein TIGR00250 (NCBI ptt file) no data 29 91
o Klebsiella michiganensis M5al BWI76_RS24085 Holliday junction resolvase RuvX no data 32 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1721.1 Putative Holliday junction resolvase YggF no data 31 95
  Dinoroseobacter shibae DFL-12 Dshi_1064 Holliday junction resolvase YqgF (RefSeq) no data 31 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_02480 Holliday junction resolvase RuvX no data 30 91
o Fusobacterium nucleatum SB010 HUW76_04355 Holliday junction resolvase RuvX no data 28 92
o Pseudomonas stutzeri RCH2 Psest_0293 RNAse H-fold protein YqgF no data 30 92
  Erwinia tracheiphila SCR3 LU632_RS05470 ruvX Holliday junction resolvase RuvX no data 33 93
  Lysobacter sp. OAE881 ABIE51_RS16020 Holliday junction resolvase RuvX no data 33 94
o Rahnella sp. WP5 EX31_RS02675 Holliday junction resolvase RuvX no data 32 91
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10385 Holliday junction resolvase RuvX no data 33 68
o Rhodopseudomonas palustris CGA009 TX73_016100 Holliday junction resolvase RuvX no data 31 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04270 Holliday junction resolvase RuvX no data 31 92
o Shewanella amazonensis SB2B Sama_2473 Holliday junction resolvase-like protein (RefSeq) no data 28 91
o Shewanella loihica PV-4 Shew_1143 Holliday junction resolvase-like protein (RefSeq) no data 27 91
  Escherichia coli ECOR27 NOLOHH_11135 ruvX Holliday junction resolvase RuvX no data 32 92
  Escherichia coli ECOR38 HEPCGN_18570 ruvX Holliday junction resolvase RuvX no data 32 92
  Escherichia coli ECRC62 BNILDI_09715 ruvX Holliday junction resolvase RuvX no data 32 92
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20370 Holliday junction resolvase RuvX no data 30 92
  Escherichia coli BL21 ECD_02779 putative Holliday junction resolvase no data 32 92
  Escherichia fergusonii Becca EFB2_00953 Putative pre-16S rRNA nuclease no data 32 92
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00769 Putative pre-16S rRNA nuclease no data 32 92
  Escherichia coli Nissle 1917 ECOLIN_RS16405 Holliday junction resolvase RuvX no data 32 92
  Escherichia coli BW25113 b2949 yqgF Holliday junction resolvase-like protein (NCBI) no data 32 92
  Escherichia coli ECRC101 OKFHMN_19265 ruvX Holliday junction resolvase RuvX no data 32 92
  Escherichia coli ECRC101 MCAODC_09785 ruvX Holliday junction resolvase RuvX no data 32 92
  Escherichia coli ECRC102 NIAGMN_17030 ruvX Holliday junction resolvase RuvX no data 32 92
  Escherichia coli ECRC98 JDDGAC_22895 ruvX Holliday junction resolvase RuvX no data 32 92
  Escherichia coli ECRC99 KEDOAH_08875 ruvX Holliday junction resolvase RuvX no data 32 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3051 Putative Holliday junction resolvase YggF no data 32 92
  Serratia liquefaciens MT49 IAI46_21400 Holliday junction resolvase RuvX no data 30 91
  Shewanella sp. ANA-3 Shewana3_1199 Holliday junction resolvase-like protein (RefSeq) no data 27 91
  Pantoea sp. MT58 IAI47_03605 Holliday junction resolvase RuvX no data 31 92
  Dickeya dianthicola ME23 DZA65_RS19640 Holliday junction resolvase RuvX no data 31 92
  Azospirillum sp. SherDot2 MPMX19_01571 Putative pre-16S rRNA nuclease no data 32 99
  Dickeya dianthicola 67-19 HGI48_RS18505 Holliday junction resolvase RuvX no data 31 92
  Enterobacter sp. TBS_079 MPMX20_03807 Putative pre-16S rRNA nuclease no data 32 92
  Enterobacter asburiae PDN3 EX28DRAFT_2987 RNAse H-fold protein YqgF no data 32 92
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1885 RNAse H-fold protein YqgF no data 31 92
  Dickeya dadantii 3937 DDA3937_RS18570 Holliday junction resolvase RuvX no data 31 92
  Pectobacterium carotovorum WPP14 HER17_RS02625 Holliday junction resolvase RuvX no data 34 91
  Caulobacter crescentus NA1000 CCNA_02521 endonuclease involved in recombination no data 30 91
  Caulobacter crescentus NA1000 Δfur CCNA_02521 endonuclease involved in recombination cofit 30 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22055 Holliday junction resolvase RuvX no data 27 92
  Rhodospirillum rubrum S1H Rru_A3178 Holliday junction resolvase YqgF (NCBI) no data 31 96
  Castellaniella sp019104865 MT123 ABCV34_RS10725 Holliday junction resolvase RuvX no data 29 70
  Azospirillum brasilense Sp245 AZOBR_RS20625 Holliday junction resolvase insig. 31 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0078 RNAse H-fold protein YqgF no data 29 90