Homologs of rplD from Desulfovibrio vulgaris Hildenborough JW710

rplD: ribosomal protein L4 (TIGR)
SEED: LSU ribosomal protein L4p (L1e)
KEGG: large subunit ribosomal protein L4

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1304 rplD ribosomal protein L4 (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0080 rplD 50S ribosomal protein L4 (RefSeq) no data 80 100
o Synechococcus elongatus PCC 7942 Synpcc7942_2231 rplD 50S ribosomal protein L4 no data 45 96
o Fusobacterium nucleatum SB010 HUW76_09200 50S ribosomal protein L4 no data 43 100
o Azospirillum brasilense Sp245 AZOBR_RS11465 50S ribosomal protein L4 no data 47 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00455 50S ribosomal protein L4 no data 41 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0254 50S ribosomal protein L4, bacterial/organelle no data 39 98
o Rhodospirillum rubrum S1H Rru_A2687 Ribosomal protein L4/L1e (NCBI) no data 44 96
o Bifidobacterium breve UCC2003 BBR_RS18930 50S ribosomal protein L4 no data 43 94
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16920 50S ribosomal protein L4 no data 38 97
o Azospirillum sp. SherDot2 MPMX19_00393 50S ribosomal protein L4 no data 44 98
o Mycobacterium tuberculosis H37Rv Rv0702 50S ribosomal protein L4 RplD no data 43 87
o Magnetospirillum magneticum AMB-1 AMB_RS15765 50S ribosomal protein L4 no data 43 98
o Rhizobium sp. OAE497 ABIE40_RS07860 50S ribosomal protein L4 no data 40 95
o Rhodopseudomonas palustris CGA009 TX73_016800 50S ribosomal protein L4 no data 43 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03915 50S ribosomal protein L4 no data 42 98
o Bacteroides thetaiotaomicron VPI-5482 BT2726 50S ribosomal protein L4 (NCBI ptt file) no data 39 98
o Agrobacterium fabrum C58 Atu1945 50S ribosomal protein L4 no data 40 95
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16975 50S ribosomal protein L4 no data 41 91
o Bacteroides ovatus ATCC 8483 BACOVA_01026 putative 50S ribosomal protein L4 no data 39 98
o Sinorhizobium meliloti 1021 SMc01308 50S ribosomal protein L4 no data 40 95
o Dickeya dadantii 3937 DDA3937_RS19280 50S ribosomal protein L4 no data 39 95
o Kangiella aquimarina DSM 16071 B158DRAFT_1877 LSU ribosomal protein L4P no data 41 93
o Dickeya dianthicola 67-19 HGI48_RS19380 50S ribosomal protein L4 no data 40 92
o Dickeya dianthicola ME23 DZA65_RS20500 50S ribosomal protein L4 no data 40 92
o Klebsiella michiganensis M5al BWI76_RS25835 50S ribosomal protein L4 no data 38 95
o Escherichia coli BL21 ECD_03170 50S ribosomal subunit protein L4 no data 38 95
o Escherichia fergusonii Becca EFB2_00504 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECOR27 NOLOHH_09165 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECOR38 HEPCGN_16195 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECRC101 OKFHMN_17365 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECRC101 MCAODC_07895 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECRC102 NIAGMN_15135 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECRC62 BNILDI_02355 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECRC98 JDDGAC_20995 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli ECRC99 KEDOAH_10775 rplD 50S ribosomal protein L4 no data 38 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00384 50S ribosomal protein L4 no data 38 95
o Escherichia coli Nissle 1917 ECOLIN_RS19030 50S ribosomal protein L4 no data 38 95
o Enterobacter asburiae PDN3 EX28DRAFT_0007 LSU ribosomal protein L4P no data 38 95
o Enterobacter sp. TBS_079 MPMX20_04226 50S ribosomal protein L4 no data 38 95
o Escherichia coli BW25113 b3319 rplD 50S ribosomal protein L4 (NCBI) no data 38 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2361 LSU ribosomal protein L4p (L1e) no data 38 95
o Marinobacter adhaerens HP15 HP15_381 50S ribosomal protein L4 no data 39 92
o Bacteroides stercoris CC31F HMPREF1181_RS00520 50S ribosomal protein L4 no data 37 98
o Pectobacterium carotovorum WPP14 HER17_RS02070 50S ribosomal protein L4 no data 37 95
o Phocaeicola dorei CL03T12C01 ABI39_RS03725 50S ribosomal protein L4 no data 38 92
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09340 50S ribosomal protein L4 no data 38 92
o Rahnella sp. WP5 EX31_RS16135 50S ribosomal protein L4 no data 37 95
o Pantoea sp. MT58 IAI47_02120 50S ribosomal protein L4 no data 37 95
o Serratia liquefaciens MT49 IAI46_23430 50S ribosomal protein L4 no data 37 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_13135 50S ribosomal protein L4 no data 39 93
o Erwinia tracheiphila SCR3 LU632_RS22650 rplD 50S ribosomal protein L4 no data 38 92
o Pseudomonas stutzeri RCH2 Psest_3605 50S ribosomal protein L4, bacterial/organelle no data 35 95
o Cupriavidus basilensis FW507-4G11 RR42_RS19250 50S ribosomal protein L4 no data 37 99
o Phaeobacter inhibens DSM 17395 PGA1_c01560 50S ribosomal protein L4 no data 42 94
o Alteromonas macleodii MIT1002 MIT1002_00385 50S ribosomal protein L4 no data 38 96
o Pseudomonas putida KT2440 PP_0455 50S ribosomal protein L4 no data 38 85
o Pseudomonas sp. RS175 PFR28_04001 50S ribosomal protein L4 no data 35 95
o Pseudomonas fluorescens FW300-N2E3 AO353_06995 50S ribosomal protein L4 no data 35 95
o Pseudomonas fluorescens FW300-N2C3 AO356_14650 50S ribosomal protein L4 no data 35 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4860 LSU ribosomal protein L4p (L1e) no data 35 95
o Caulobacter crescentus NA1000 CCNA_01307 LSU ribosomal protein L1E-L4P no data 40 94
o Caulobacter crescentus NA1000 Δfur CCNA_01307 LSU ribosomal protein L1E-L4P no data 40 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19350 50S ribosomal protein L4 no data 36 91
o Bosea sp. OAE506 ABIE41_RS14555 50S ribosomal protein L4 no data 39 94
o Pseudomonas sp. S08-1 OH686_15360 50S ribosomal protein L4 no data 41 80
o Pseudomonas syringae pv. syringae B728a Psyr_4547 LSU ribosomal protein L4P no data 35 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4547 LSU ribosomal protein L4P no data 35 95
o Pseudomonas fluorescens SBW25 PFLU_RS27160 50S ribosomal protein L4 no data 35 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27160 50S ribosomal protein L4 no data 35 95
o Pseudomonas simiae WCS417 PS417_25530 50S ribosomal protein L4 no data 35 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2583 LSU ribosomal protein L4p (L1e) no data 35 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1255 LSU ribosomal protein L4p (L1e) no data 34 95
o Shewanella loihica PV-4 Shew_0159 rplD 50S ribosomal protein L4 (RefSeq) no data 37 96
o Dinoroseobacter shibae DFL-12 Dshi_0277 ribosomal protein L4/L1e (RefSeq) no data 39 96
o Shewanella sp. ANA-3 Shewana3_0200 rplD 50S ribosomal protein L4 (RefSeq) no data 36 96
o Shewanella oneidensis MR-1 SO0232 rplD ribosomal protein L4 (NCBI ptt file) no data 36 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS02835 50S ribosomal protein L4 no data 35 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07185 50S ribosomal protein L4 no data 34 99
o Ralstonia solanacearum UW163 UW163_RS06435 50S ribosomal protein L4 no data 34 99
o Acinetobacter radioresistens SK82 MPMX26_02720 50S ribosomal protein L4 no data 36 94
o Dechlorosoma suillum PS Dsui_0358 50S ribosomal protein L4, bacterial/organelle no data 34 98
o Ralstonia solanacearum PSI07 RPSI07_RS10060 50S ribosomal protein L4 no data 36 92
o Burkholderia phytofirmans PsJN BPHYT_RS18110 50S ribosomal protein L4 no data 35 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05569 LSU ribosomal protein L4P no data 35 98
o Paraburkholderia graminis OAS925 ABIE53_003785 large subunit ribosomal protein L4 no data 35 98
o Shewanella amazonensis SB2B Sama_0214 rplD 50S ribosomal protein L4 (RefSeq) no data 35 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS28260 50S ribosomal protein L4 no data 34 98
o Herbaspirillum seropedicae SmR1 HSERO_RS00575 50S ribosomal protein L4 no data 34 98
o Ralstonia solanacearum GMI1000 RS_RS15120 50S ribosomal protein L4 no data 35 92
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3730 50S ribosomal protein L4, bacterial/organelle no data 37 99
o Castellaniella sp019104865 MT123 ABCV34_RS11465 50S ribosomal protein L4 no data 33 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2910 LSU ribosomal protein L4p (L1e) no data 32 99
o Acidovorax sp. GW101-3H11 Ac3H11_2134 LSU ribosomal protein L4p (L1e) no data 34 95
o Variovorax sp. OAS795 ABID97_RS00650 50S ribosomal protein L4 no data 36 91
o Variovorax sp. SCN45 GFF3636 LSU ribosomal protein L4p (L1e) no data 35 91
o Rhodanobacter sp. FW510-T8 OKGIIK_10460 rplD 50S ribosomal protein L4 no data 34 92
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21900 50S ribosomal protein L4 no data 33 92
o Rhodanobacter denitrificans MT42 LRK55_RS03320 50S ribosomal protein L4 no data 34 92
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03570 50S ribosomal protein L4 no data 34 92