Homologs of SO3934 from Shewanella oneidensis MR-1

RNA methyltransferase, TrmH family, group 3 (NCBI ptt file)
SEED: 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)
KEGG: RNA methyltransferase, TrmH family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3934 RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_0698 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) strong 98 100
o Shewanella amazonensis SB2B Sama_3066 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) strong 77 97
o Shewanella loihica PV-4 Shew_3288 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) sig. 77 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_13150 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 67 98
o Dickeya dadantii 3937 DDA3937_RS17255 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 67 98
o Dickeya dianthicola 67-19 HGI48_RS17310 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 68 98
o Escherichia coli BL21 ECD_04047 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent strong 66 98
o Escherichia fergusonii Becca EFB2_04355 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB insig. 66 98
o Escherichia coli ECOR27 NOLOHH_04480 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB cofit 66 98
o Escherichia coli ECOR38 HEPCGN_10445 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB cofit 66 98
o Escherichia coli ECRC101 OKFHMN_12215 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 66 98
o Escherichia coli ECRC101 MCAODC_02730 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 66 98
o Escherichia coli ECRC102 NIAGMN_10065 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 66 98
o Escherichia coli ECRC62 BNILDI_07010 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 66 98
o Escherichia coli ECRC98 JDDGAC_15855 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 66 98
o Escherichia coli ECRC99 KEDOAH_15940 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 66 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03862 '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 sig. 66 98
o Escherichia coli Nissle 1917 ECOLIN_RS24270 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 66 98
o Escherichia coli BW25113 b4180 rlmB 23S rRNA (Gm2251)-methyltransferase (NCBI) sig. 66 98
o Dickeya dianthicola ME23 DZA65_RS18400 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 67 98
o Klebsiella michiganensis M5al BWI76_RS02580 23S rRNA (guanosine(2251)-2'-O)-methyltransferase insig. 67 98
o Enterobacter asburiae PDN3 EX28DRAFT_3377 rRNA methylase, putative, group 3 insig. 66 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF833 '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11 insig. 66 98
o Pectobacterium carotovorum WPP14 HER17_RS03840 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 66 98
o Alteromonas macleodii MIT1002 MIT1002_03605 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB sig. 61 99
o Enterobacter sp. TBS_079 MPMX20_00461 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB insig. 66 98
o Serratia liquefaciens MT49 IAI46_01665 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 65 98
o Rahnella sp. WP5 EX31_RS08780 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 65 98
o Erwinia tracheiphila SCR3 LU632_RS21745 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 65 98
o Pantoea sp. MT58 IAI47_02630 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 63 98
o Pseudomonas sp. S08-1 OH686_15915 23S rRNA (guanosine(2251)-2'-O)-methyltransferase cofit 60 100
o Marinobacter adhaerens HP15 HP15_623 RNA methyltransferase, TrmH family, group 3 insig. 61 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_143 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) insig. 59 99
o Pseudomonas syringae pv. syringae B728a Psyr_0580 23S rRNA Gm-2251 2'-O-methyltransferase insig. 59 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0580 23S rRNA Gm-2251 2'-O-methyltransferase sig. 59 99
o Pseudomonas sp. RS175 PFR28_05131 '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 insig. 59 99
o Pseudomonas fluorescens FW300-N2E3 AO353_13205 23S rRNA methyltransferase sig. 58 99
o Pseudomonas fluorescens FW300-N2C3 AO356_08605 23S rRNA methyltransferase insig. 59 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1402 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) insig. 58 99
o Pseudomonas fluorescens SBW25 PFLU_RS02630 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 59 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02630 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 59 97
o Pseudomonas simiae WCS417 PS417_02560 23S rRNA methyltransferase sig. 59 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3606 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) sig. 59 97
o Pseudomonas stutzeri RCH2 Psest_0692 rRNA methylase, putative, group 3 strong 57 100
o Pseudomonas putida KT2440 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB insig. 58 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15350 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 57 99
o Ralstonia solanacearum UW163 UW163_RS12815 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 57 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1990 23S rRNA Gm-2251 2'-O-methyltransferase (EC 2.1.1.185) insig. 58 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS10990 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB strong 57 99
o Ralstonia solanacearum PSI07 RPSI07_RS18025 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB cofit 56 99
o Ralstonia solanacearum GMI1000 RS_RS06160 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB strong 56 99
o Cupriavidus basilensis FW507-4G11 RR42_RS13060 23S rRNA methyltransferase sig. 53 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS22920 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB strong 52 99
o Paraburkholderia graminis OAS925 ABIE53_001941 23S rRNA (guanosine2251-2'-O)-methyltransferase sig. 51 99
o Acidovorax sp. GW101-3H11 Ac3H11_4141 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) strong 51 99
o Burkholderia phytofirmans PsJN BPHYT_RS08460 23S rRNA (guanosine-2'-O-)-methyltransferase no data 51 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00713 23S rRNA Gm-2251 2'-O-methyltransferase insig. 50 99
o Castellaniella sp019104865 MT123 ABCV34_RS06630 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 52 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4838 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) cofit 50 99
o Herbaspirillum seropedicae SmR1 HSERO_RS09295 23S rRNA (guanosine-2'-O-)-methyltransferase insig. 52 98
o Variovorax sp. SCN45 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) sig. 51 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08265 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 52 97
o Variovorax sp. OAS795 ABID97_RS14320 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 50 99
o Rhodanobacter denitrificans MT42 LRK55_RS00230 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 51 97
o Acinetobacter radioresistens SK82 MPMX26_00241 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB cofit 50 100
o Dechlorosoma suillum PS Dsui_1899 rRNA methylase, putative, group 3 cofit 55 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00490 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 51 97
o Rhodanobacter sp. FW510-T8 OKGIIK_06760 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 51 97
o Lysobacter sp. OAE881 ABIE51_RS07480 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 50 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3368.1 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) sig. 48 99
o Azospirillum brasilense Sp245 AZOBR_RS11565 ribosomal large subunit pseudouridine synthase insig. 40 97
  Synechococcus elongatus PCC 7942 Synpcc7942_2119 RNA methyltransferase TrmH, group 3 strong 39 98
o Magnetospirillum magneticum AMB-1 AMB_RS15870 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 36 96
  Bifidobacterium breve UCC2003 BBR_RS20270 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB no data 35 98
o Fusobacterium nucleatum SB010 HUW76_09335 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB cofit 35 96
o Azospirillum sp. SherDot2 MPMX19_00374 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB no data 44 72
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09355 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 35 99
o Rhodopseudomonas palustris CGA009 TX73_017390 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 36 95
  Bacteroides stercoris CC31F HMPREF1181_RS10895 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 40 73
  Mycobacterium tuberculosis H37Rv Rv3579c Possible tRNA/rRNA methyltransferase no data 38 87
o Bacteroides ovatus ATCC 8483 BACOVA_00199 RNA methyltransferase, TrmH family, group 3 sig. 34 100
o Bacteroides thetaiotaomicron VPI-5482 BT1360 tRNA/rRNA methyltransferase (NCBI ptt file) no data 33 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18220 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB strong 38 72
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2186 rRNA methylase, putative, group 3 sig. 32 98
  Phocaeicola dorei CL03T12C01 ABI39_RS14495 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 37 72
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08890 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB strong 34 99
o Caulobacter crescentus NA1000 CCNA_01297 23S rRNA Gm2251 methyltransferase strong 35 98
o Caulobacter crescentus NA1000 Δfur CCNA_01297 23S rRNA Gm2251 methyltransferase cofit 35 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1266.1 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] insig. 34 98
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS02015 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 34 99
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20095 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB sig. 33 98
o Phaeobacter inhibens DSM 17395 PGA1_c09200 putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB sig. 37 94
  Agrobacterium fabrum C58 Atu1993 tRNA/rRNA metyltransferase insig. 33 94
  Rhodospirillum rubrum S1H Rru_A2703 RNA methyltransferase TrmH, group 3 (NCBI) insig. 33 95
  Bosea sp. OAE506 ABIE41_RS14185 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 41 72
o Desulfovibrio vulgaris Hildenborough JW710 DVU0042 RNA methyltransferase, TrmH family, group 3 (TIGR) insig. 34 95
  Rhizobium sp. OAE497 ABIE40_RS07725 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB insig. 32 93
  Sinorhizobium meliloti 1021 SMc01327 tRNA/rRNA methyltransferase insig. 34 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1814 rRNA methylase, putative, group 3 sig. 41 66