Homologs of rplD from Shewanella oneidensis MR-1

rplD: ribosomal protein L4 (NCBI ptt file)
SEED: LSU ribosomal protein L4p (L1e)
KEGG: large subunit ribosomal protein L4

124 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
o Shewanella sp. ANA-3 Shewana3_0200 rplD 50S ribosomal protein L4 (RefSeq) no data 100 100
  Shewanella oneidensis MR-1 SO0232 rplD ribosomal protein L4 (NCBI ptt file) no data 100 100
o Shewanella amazonensis SB2B Sama_0214 rplD 50S ribosomal protein L4 (RefSeq) no data 94 100
o Shewanella loihica PV-4 Shew_0159 rplD 50S ribosomal protein L4 (RefSeq) no data 95 100
o Rahnella sp. WP5 EX31_RS16135 50S ribosomal protein L4 no data 89 100
o Serratia liquefaciens MT49 IAI46_23430 50S ribosomal protein L4 no data 89 100
o Pectobacterium carotovorum WPP14 HER17_RS02070 50S ribosomal protein L4 no data 88 100
o Pantoea sp. MT58 IAI47_02120 50S ribosomal protein L4 no data 88 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS02135 rplD 50S ribosomal protein L4 no data 88 100
o Dickeya dadantii 3937 DDA3937_RS19280 50S ribosomal protein L4 no data 87 100
o Klebsiella michiganensis M5al BWI76_RS25835 50S ribosomal protein L4 no data 87 100
o Erwinia amylovora T8 OLJFJH_03880 50S ribosomal protein L4 no data 87 100
o Dickeya dianthicola 67-19 HGI48_RS19380 50S ribosomal protein L4 no data 86 100
o Dickeya dianthicola ME23 DZA65_RS20500 50S ribosomal protein L4 no data 86 100
o Escherichia coli BL21 ECD_03170 50S ribosomal subunit protein L4 no data 86 100
o Escherichia fergusonii Becca EFB2_00504 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECOR27 NOLOHH_09165 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECOR38 HEPCGN_16195 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECRC100 OKFHMN_17365 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECRC101 MCAODC_07895 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECRC102 NIAGMN_15135 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECRC62 BNILDI_02355 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECRC98 JDDGAC_20995 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli ECRC99 KEDOAH_10775 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00384 50S ribosomal protein L4 no data 86 100
o Escherichia coli Nissle 1917 ECOLIN_RS19030 50S ribosomal protein L4 no data 86 100
o Enterobacter asburiae PDN3 EX28DRAFT_0007 LSU ribosomal protein L4P no data 86 100
o Enterobacter sp. TBS_079 MPMX20_04226 50S ribosomal protein L4 no data 86 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12270 rplD 50S ribosomal protein L4 no data 86 100
o Erwinia tracheiphila SCR3 LU632_RS22650 rplD 50S ribosomal protein L4 no data 86 100
o Escherichia coli BW25113 b3319 rplD 50S ribosomal protein L4 (NCBI) no data 86 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2361 LSU ribosomal protein L4p (L1e) no data 86 100
o Klebsiella pneumoniae MKP103 KDGMDA_06695 50S ribosomal protein L4 no data 86 100
o Klebsiella pneumoniae MRSN742743 GJGHJB_00397 rplD 50S ribosomal protein L4 no data 86 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_13135 50S ribosomal protein L4 no data 82 100
o Alteromonas macleodii MIT1002 MIT1002_00385 50S ribosomal protein L4 no data 80 100
o Pseudomonas sp. S08-1 OH686_15360 50S ribosomal protein L4 no data 75 100
o Pseudomonas sp. BP01 JOY50_RS20445 rplD 50S ribosomal protein L4 no data 70 100
o Pseudomonas putida KT2440 PP_0455 50S ribosomal protein L4 no data 70 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1877 LSU ribosomal protein L4P no data 70 100
o Pseudomonas sp. SVBP6 COO64_RS16215 rplD 50S ribosomal protein L4 no data 69 100
o Pseudomonas sp. RS175 PFR28_04001 50S ribosomal protein L4 no data 68 100
o Pseudomonas fluorescens FW300-N2E3 AO353_06995 50S ribosomal protein L4 no data 68 100
o Pseudomonas fluorescens FW300-N2C3 AO356_14650 50S ribosomal protein L4 no data 68 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4860 LSU ribosomal protein L4p (L1e) no data 68 100
o Pseudomonas segetis P6 ACVTMO_RS04645 rplD 50S ribosomal protein L4 no data 69 100
o Pseudomonas fluorescens SBW25 PFLU_RS27160 50S ribosomal protein L4 no data 68 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27160 50S ribosomal protein L4 no data 68 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05221 50S ribosomal protein L4 no data 68 100
o Pseudomonas orientalis W4I3 QF045_RS27555 50S ribosomal protein L4 no data 68 100
o Pseudomonas simiae WCS417 PS417_25530 50S ribosomal protein L4 no data 68 100
o Pseudomonas protegens RBAN4 FABNJH_28090 rplD 50S ribosomal protein L4 no data 68 100
o Pseudomonas syringae pv. syringae B728a Psyr_4547 LSU ribosomal protein L4P no data 68 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4547 LSU ribosomal protein L4P no data 68 100
o Pseudomonas sp. DMC3 GFF3765 50S ribosomal protein L4 no data 68 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1255 LSU ribosomal protein L4p (L1e) no data 68 100
o Pseudomonas aeruginosa MRSN321 PFGADD_00692 rplD 50S ribosomal protein L4 no data 70 100
o Pseudomonas aeruginosa PA14 IKLFDK_21935 50S ribosomal protein L4 no data 70 100
o Pseudomonas aeruginosa PUPa3 NPBIFN_00695 rplD 50S ribosomal protein L4 no data 70 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2583 LSU ribosomal protein L4p (L1e) no data 67 100
o Pseudomonas stutzeri RCH2 Psest_3605 50S ribosomal protein L4, bacterial/organelle no data 67 100
o Marinobacter adhaerens HP15 HP15_381 50S ribosomal protein L4 no data 62 100
o Acinetobacter baumannii LAC-4 RR41_RS02165 50S ribosomal protein L4 no data 68 94
o Acinetobacter radioresistens SK82 MPMX26_02720 50S ribosomal protein L4 no data 67 94
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2910 LSU ribosomal protein L4p (L1e) no data 57 97
o Dechlorosoma suillum PS Dsui_0358 50S ribosomal protein L4, bacterial/organelle no data 57 100
o Variovorax sp. SCN45 GFF3636 LSU ribosomal protein L4p (L1e) no data 56 100
o Variovorax sp. OAS795 ABID97_RS00650 50S ribosomal protein L4 no data 55 100
o Castellaniella sp019104865 MT123 ABCV34_RS11465 50S ribosomal protein L4 no data 56 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS28260 50S ribosomal protein L4 no data 56 100
o Herbaspirillum seropedicae SmR1 HSERO_RS00575 50S ribosomal protein L4 no data 56 100
o Ralstonia solanacearum GMI1000 RS_RS15120 50S ribosomal protein L4 no data 56 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07185 50S ribosomal protein L4 no data 56 100
o Ralstonia solanacearum UW163 UW163_RS06435 50S ribosomal protein L4 no data 56 100
o Ralstonia solanacearum PSI07 RPSI07_RS10060 50S ribosomal protein L4 no data 55 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS02835 50S ribosomal protein L4 no data 59 93
o Burkholderia phytofirmans PsJN BPHYT_RS18110 50S ribosomal protein L4 no data 55 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05569 LSU ribosomal protein L4P no data 55 100
o Paraburkholderia graminis OAS925 ABIE53_003785 large subunit ribosomal protein L4 no data 55 100
o Acidovorax sp. GW101-3H11 Ac3H11_2134 LSU ribosomal protein L4p (L1e) no data 54 100
o Cupriavidus basilensis FW507-4G11 RR42_RS19250 50S ribosomal protein L4 no data 57 95
o Methylophilus sp. DMC18 GFF1597 50S ribosomal protein L4 no data 55 100
o Lysobacter sp. OAE881 ABIE51_RS05845 50S ribosomal protein L4 no data 56 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4142.1 LSU ribosomal protein L4p (L1e) no data 55 100
o Rhodanobacter sp. FW510-T8 OKGIIK_10460 rplD 50S ribosomal protein L4 no data 52 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21900 50S ribosomal protein L4 no data 52 100
o Rhodanobacter denitrificans MT42 LRK55_RS03320 50S ribosomal protein L4 no data 51 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03570 50S ribosomal protein L4 no data 51 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06375 50S ribosomal protein L4 no data 50 100
o Synechocystis sp000284455 PCC 6803 SGL_RS05845 50S ribosomal protein L4 no data 44 86
o Synechococcus elongatus PCC 7942 Synpcc7942_2231 rplD 50S ribosomal protein L4 no data 42 87
o Cellulophaga baltica 18 M666_RS01010 50S ribosomal protein L4 no data 38 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19350 50S ribosomal protein L4 no data 40 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16920 50S ribosomal protein L4 no data 36 98
o Bacteroides ovatus ATCC 8483 BACOVA_01026 putative 50S ribosomal protein L4 no data 36 97
o Bacteroides thetaiotaomicron VPI-5482 BT2726 50S ribosomal protein L4 (NCBI ptt file) no data 37 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00455 50S ribosomal protein L4 no data 36 98
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0254 50S ribosomal protein L4, bacterial/organelle no data 36 95
o Phocaeicola dorei CL03T12C01 ABI39_RS03725 50S ribosomal protein L4 no data 34 98
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09340 50S ribosomal protein L4 no data 34 98
o Bacteroides stercoris CC31F HMPREF1181_RS00520 50S ribosomal protein L4 no data 35 97
o Rhodospirillum rubrum S1H Rru_A2687 Ribosomal protein L4/L1e (NCBI) no data 37 97
o Desulfovibrio vulgaris Miyazaki F DvMF_0080 rplD 50S ribosomal protein L4 (RefSeq) no data 37 94
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16975 50S ribosomal protein L4 no data 37 97
o Mycobacterium tuberculosis H37Rv Rv0702 50S ribosomal protein L4 RplD no data 40 95
o Fusobacterium nucleatum SB010 HUW76_09200 50S ribosomal protein L4 no data 38 95
  Bifidobacterium breve UCC2003 BBR_RS18930 50S ribosomal protein L4 no data 42 83
o Desulfovibrio vulgaris Hildenborough JW710 DVU1304 rplD ribosomal protein L4 (TIGR) no data 36 96
o Azospirillum sp. SherDot2 MPMX19_00393 50S ribosomal protein L4 no data 35 97
o Azospirillum brasilense Sp245 AZOBR_RS11465 50S ribosomal protein L4 no data 35 94
o Magnetospirillum magneticum AMB-1 AMB_RS15765 50S ribosomal protein L4 no data 35 94
o Xanthobacter sp. DMC5 GFF1378 50S ribosomal protein L4 no data 34 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3730 50S ribosomal protein L4, bacterial/organelle no data 35 95
  Agrobacterium fabrum C58 Atu1945 50S ribosomal protein L4 no data 32 96
  Sinorhizobium meliloti 1021 SMc01308 50S ribosomal protein L4 no data 32 96
  Bosea sp. OAE506 ABIE41_RS14555 50S ribosomal protein L4 no data 31 93
  Rhodopseudomonas palustris CGA009 TX73_016800 50S ribosomal protein L4 no data 33 94
  Rhizobium sp. OAE497 ABIE40_RS07860 50S ribosomal protein L4 no data 30 96
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03915 50S ribosomal protein L4 no data 34 95
  Phaeobacter inhibens DSM 17395 PGA1_c01560 50S ribosomal protein L4 no data 32 94
  Sphingobium sp. HT1-2 GFF3160 LSU ribosomal protein L4p (L1e) no data 31 95
  Dinoroseobacter shibae DFL-12 Dshi_0277 ribosomal protein L4/L1e (RefSeq) no data 32 97
  Caulobacter crescentus NA1000 CCNA_01307 LSU ribosomal protein L1E-L4P no data 33 95
  Caulobacter crescentus NA1000 Δfur CCNA_01307 LSU ribosomal protein L1E-L4P no data 33 95