Homologs of Rru_A3634 from Rhodospirillum rubrum S1H

Protein of unknown function UPF0001 (NCBI)
SEED: Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC

136 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A3634 Protein of unknown function UPF0001 (NCBI) insig. 100 100
o Azospirillum brasilense Sp245 AZOBR_RS01870 alanine racemase no data 62 91
o Azospirillum sp. SherDot2 MPMX19_00050 Pyridoxal phosphate homeostasis protein cofit 64 90
o Rhizobium sp. OAE497 ABIE40_RS19180 YggS family pyridoxal phosphate-dependent enzyme no data 57 90
o Rhodopseudomonas palustris CGA009 TX73_001485 YggS family pyridoxal phosphate-dependent enzyme strong 59 85
o Magnetospirillum magneticum AMB-1 AMB_RS00120 YggS family pyridoxal phosphate-dependent enzyme cofit 60 90
o Xanthobacter sp. DMC5 GFF1427 Pyridoxal phosphate homeostasis protein insig. 59 88
o Agrobacterium fabrum C58 Atu2747 hypothetical protein strong 58 90
o Sinorhizobium meliloti 1021 SMc02812 hypothetical protein sig. 56 90
o Bosea sp. OAE506 ABIE41_RS04720 YggS family pyridoxal phosphate-dependent enzyme cofit 57 90
o Ralstonia solanacearum PSI07 RPSI07_RS02580 YggS family pyridoxal phosphate-dependent enzyme insig. 57 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS20285 YggS family pyridoxal phosphate-dependent enzyme sig. 56 90
o Ralstonia solanacearum UW163 UW163_RS18890 YggS family pyridoxal phosphate-dependent enzyme insig. 56 90
o Dinoroseobacter shibae DFL-12 Dshi_0042 alanine racemase domain protein (RefSeq) strong 58 85
o Phaeobacter inhibens DSM 17395 PGA1_c33360 putative alanine racemase strong 57 88
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13760 YggS family pyridoxal phosphate-dependent enzyme insig. 56 89
o Ralstonia solanacearum GMI1000 RS_RS20395 YggS family pyridoxal phosphate-dependent enzyme insig. 56 91
o Caulobacter crescentus NA1000 CCNA_03861 pyridoxal 5'-phosphate dependent enzyme class III strong 53 81
o Caulobacter crescentus NA1000 Δfur CCNA_03861 pyridoxal 5'-phosphate dependent enzyme class III cofit 53 81
o Sphingobium sp. HT1-2 GFF4152 Pyridoxal phosphate-containing protein YggS cofit 49 88
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2216 pyridoxal phosphate enzyme, YggS family insig. 50 88
o Dickeya dianthicola ME23 DZA65_RS03335 YggS family pyridoxal phosphate-dependent enzyme insig. 41 83
  Rhodanobacter denitrificans MT42 LRK55_RS02655 YggS family pyridoxal phosphate-dependent enzyme insig. 45 88
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02905 YggS family pyridoxal phosphate-dependent enzyme insig. 44 88
  Rhodanobacter sp. FW510-T8 OKGIIK_09885 Pyridoxal phosphate homeostasis protein insig. 44 88
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07085 YggS family pyridoxal phosphate-dependent enzyme insig. 44 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04680 hypothetical protein sig. 44 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS26595 YggS family pyridoxal phosphate-dependent enzyme sig. 46 90
o Paraburkholderia graminis OAS925 ABIE53_000841 pyridoxal phosphate enzyme (YggS family) strong 43 90
o Variovorax sp. OAS795 ABID97_RS00250 YggS family pyridoxal phosphate-dependent enzyme no data 42 89
  Variovorax sp. SCN45 GFF3744 Pyridoxal phosphate-containing protein YggS no data 42 89
o Shewanella loihica PV-4 Shew_1137 alanine racemase domain-containing protein (RefSeq) insig. 41 85
  Burkholderia phytofirmans PsJN BPHYT_RS03495 hypothetical protein strong 44 90
  Pectobacterium carotovorum WPP14 HER17_RS01985 YggS family pyridoxal phosphate-dependent enzyme insig. 42 93
  Herbaspirillum seropedicae SmR1 HSERO_RS18995 hypothetical protein strong 42 90
  Pseudomonas fluorescens FW300-N2E3 AO353_10505 hypothetical protein sig. 43 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS01225 YggS family pyridoxal phosphate-dependent enzyme strong 44 90
  Dickeya dadantii 3937 DDA3937_RS17300 YggS family pyridoxal phosphate-dependent enzyme sig. 40 90
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09305 YggS family pyridoxal phosphate-dependent enzyme no data 44 88
  Castellaniella sp019104865 MT123 ABCV34_RS02955 YggS family pyridoxal phosphate-dependent enzyme strong 40 90
  Klebsiella michiganensis M5al BWI76_RS24100 YggS family pyridoxal phosphate enzyme strong 40 90
  Enterobacter asburiae PDN3 EX28DRAFT_2989 pyridoxal phosphate enzyme, YggS family cofit 38 90
  Rhodanobacter denitrificans MT42 LRK55_RS08955 YggS family pyridoxal phosphate-dependent enzyme insig. 40 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_02455 YggS family pyridoxal phosphate enzyme cofit 39 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2160 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC insig. 42 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2722 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC sig. 40 91
  Pseudomonas syringae pv. syringae B728a Psyr_0477 Protein of unknown function UPF0001 sig. 40 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0477 Protein of unknown function UPF0001 insig. 40 90
  Dickeya dianthicola 67-19 HGI48_RS17345 YggS family pyridoxal phosphate-dependent enzyme insig. 38 90
  Dechlorosoma suillum PS Dsui_0603 pyridoxal phosphate enzyme, YggS family strong 42 90
  Klebsiella pneumoniae MKP103 KDGMDA_04615 YggS family pyridoxal phosphate enzyme insig. 41 90
  Klebsiella pneumoniae MRSN742743 KFA93_RS12160 YggS family pyridoxal phosphate-dependent enzyme insig. 41 90
  Dickeya dianthicola ME23 DZA65_RS18435 YggS family pyridoxal phosphate-dependent enzyme insig. 38 90
  Pseudomonas sp. S08-1 OH686_10975 Pyridoxal phosphate-containing protein YggS cofit 39 90
  Marinobacter adhaerens HP15 HP15_288 alanine racemase domain protein insig. 41 79
  Shewanella sp. ANA-3 Shewana3_1194 hypothetical protein (RefSeq) cofit 38 90
  Pseudomonas segetis P6 ACVTMO_RS03020 YggS family pyridoxal phosphate-dependent enzyme sig. 39 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05482 Pyridoxal phosphate homeostasis protein cofit 41 90
  Pseudomonas orientalis W4I3 QF045_RS01125 YggS family pyridoxal phosphate-dependent enzyme insig. 41 90
  Shewanella oneidensis MR-1 SO3352 conserved hypothetical protein TIGR00044 (NCBI ptt file) strong 36 90
  Herbaspirillum seropedicae SmR1 HSERO_RS02515 enzyme with a TIM-barrel fold protein insig. 40 88
  Enterobacter sp. TBS_079 MPMX20_03809 Pyridoxal phosphate homeostasis protein sig. 37 90
  Escherichia fergusonii Becca EFB2_00951 Pyridoxal phosphate homeostasis protein insig. 38 90
o Alteromonas macleodii MIT1002 MIT1002_03061 pyridoxal phosphate enzyme, YggS family insig. 36 90
  Kangiella aquimarina DSM 16071 B158DRAFT_0196 pyridoxal phosphate enzyme, YggS family insig. 39 80
  Escherichia coli BL21 ECD_02781 UPF0001 family protein, PLP-binding insig. 38 90
  Escherichia coli ECOR27 NOLOHH_11125 yggS pyridoxal phosphate homeostasis protein sig. 38 90
  Escherichia coli ECOR38 HEPCGN_18560 yggS pyridoxal phosphate homeostasis protein strong 38 90
  Escherichia coli ECRC100 OKFHMN_19255 yggS pyridoxal phosphate homeostasis protein strong 38 90
  Escherichia coli ECRC101 MCAODC_09775 yggS pyridoxal phosphate homeostasis protein strong 38 90
  Escherichia coli ECRC102 NIAGMN_17020 yggS pyridoxal phosphate homeostasis protein strong 38 90
  Escherichia coli ECRC62 BNILDI_09705 yggS pyridoxal phosphate homeostasis protein insig. 38 90
  Escherichia coli ECRC98 JDDGAC_22885 yggS pyridoxal phosphate homeostasis protein strong 38 90
  Escherichia coli ECRC99 KEDOAH_08885 yggS pyridoxal phosphate homeostasis protein no data 38 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00765 Pyridoxal phosphate homeostasis protein sig. 38 90
  Escherichia coli Nissle 1917 ECOLIN_RS16415 pyridoxal phosphate homeostasis protein sig. 38 90
  Escherichia coli BW25113 b2951 yggS predicted enzyme (NCBI) strong 38 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3054 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 37 90
  Pseudomonas sp. DMC3 GFF209 Pyridoxal phosphate homeostasis protein cofit 39 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05575 YggS family pyridoxal phosphate-dependent enzyme strong 44 90
  Ralstonia solanacearum UW163 UW163_RS08050 YggS family pyridoxal phosphate-dependent enzyme insig. 44 90
  Pseudomonas putida KT2440 PP_5094 putative enzyme with PLP binding domain strong 41 90
  Pantoea sp. MT58 IAI47_03595 YggS family pyridoxal phosphate-dependent enzyme strong 37 90
  Shewanella amazonensis SB2B Sama_2477 hypothetical protein (RefSeq) strong 37 90
  Pectobacterium carotovorum WPP14 HER17_RS03810 YggS family pyridoxal phosphate-dependent enzyme cofit 36 90
  Acidovorax sp. GW101-3H11 Ac3H11_4474 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 39 85
  Rahnella sp. WP5 EX31_RS02685 YggS family pyridoxal phosphate-dependent enzyme insig. 37 90
  Pseudomonas simiae WCS417 PS417_26725 hypothetical protein sig. 39 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS03830 YggS family pyridoxal phosphate-dependent enzyme cofit 37 90
  Lysobacter sp. OAE881 ABIE51_RS16060 YggS family pyridoxal phosphate-dependent enzyme insig. 43 79
  Pseudomonas sp. BP01 JOY50_RS20910 YggS family pyridoxal phosphate-dependent enzyme insig. 42 82
  Ralstonia solanacearum GMI1000 RS_RS13435 YggS family pyridoxal phosphate-dependent enzyme strong 43 90
  Pseudomonas fluorescens FW300-N2C3 AO356_13425 hypothetical protein strong 38 90
  Pseudomonas aeruginosa PA14 IKLFDK_23450 Pyridoxal phosphate homeostasis protein strong 41 90
  Pseudomonas aeruginosa MRSN321 DY961_RS21950 YggS family pyridoxal phosphate-dependent enzyme strong 41 90
  Erwinia amylovora T8 OLJFJH_08530 YggS family pyridoxal phosphate enzyme cofit 36 93
  Ralstonia solanacearum PSI07 RPSI07_RS11725 YggS family pyridoxal phosphate-dependent enzyme strong 41 90
  Pseudomonas fluorescens SBW25 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme cofit 40 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme strong 40 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2342 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC no data 39 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS37350 YggS family pyridoxal phosphate-dependent enzyme sig. 41 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1011 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC sig. 39 90
  Pseudomonas stutzeri RCH2 Psest_0284 pyridoxal phosphate enzyme, YggS family strong 38 90
  Cupriavidus basilensis FW507-4G11 RR42_RS17355 hypothetical protein strong 43 90
  Desulfovibrio vulgaris Miyazaki F DvMF_2208 alanine racemase domain protein (RefSeq) sig. 39 94
  Pseudomonas protegens RBAN4 FABNJH_29425 Pyridoxal phosphate homeostasis protein insig. 39 90
  Erwinia tracheiphila SCR3 LU632_RS05460 YggS family pyridoxal phosphate-dependent enzyme strong 37 90
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03450 YggS family pyridoxal phosphate enzyme cofit 37 90
  Methylophilus sp. DMC18 GFF864 Pyridoxal phosphate homeostasis protein insig. 36 90
  Synechococcus elongatus PCC 7942 Synpcc7942_2060 ylmE hypothetical protein strong 42 80
  Pseudomonas sp. SVBP6 COO64_RS13000 YggS family pyridoxal phosphate-dependent enzyme cofit 39 90
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11740 YggS family pyridoxal phosphate-dependent enzyme cofit 35 86
  Rhodopseudomonas palustris CGA009 TX73_014475 YggS family pyridoxal phosphate-dependent enzyme insig. 41 88
  Cellulophaga baltica 18 M666_RS17595 YggS family pyridoxal phosphate-dependent enzyme sig. 31 90
  Rhodospirillum rubrum S1H Rru_A1141 Protein of unknown function UPF0001 (NCBI) insig. 39 91
  Pseudomonas sp. RS175 PFR28_04242 Pyridoxal phosphate homeostasis protein strong 38 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4601 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 38 90
  Bacteroides ovatus ATCC 8483 BACOVA_00593 pyridoxal phosphate enzyme, YggS family insig. 35 86
  Bacteroides thetaiotaomicron VPI-5482 BT1332 conserved hypothetical protein (NCBI ptt file) insig. 35 86
  Acinetobacter baumannii LAC-4 RR41_RS14795 YggS family pyridoxal phosphate-dependent enzyme insig. 36 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1711.1 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC strong 41 79
  Desulfovibrio vulgaris Hildenborough JW710 DVU0051 conserved hypothetical protein TIGR00044 (TIGR) sig. 41 90
  Pseudomonas fluorescens FW300-N2E3 AO353_08160 hypothetical protein sig. 38 90
  Acinetobacter radioresistens SK82 MPMX26_02404 Pyridoxal phosphate homeostasis protein strong 37 87
  Serratia liquefaciens MT49 IAI46_21410 YggS family pyridoxal phosphate-dependent enzyme cofit 37 90
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15965 YggS family pyridoxal phosphate-dependent enzyme insig. 32 90
  Fusobacterium nucleatum SB010 HUW76_07280 YggS family pyridoxal phosphate-dependent enzyme strong 34 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06410 YggS family pyridoxal phosphate enzyme sig. 36 79
  Bacteroides stercoris CC31F HMPREF1181_RS10865 YggS family pyridoxal phosphate-dependent enzyme insig. 32 90
  Synechocystis sp000284455 PCC 6803 SGL_RS16960 YggS family pyridoxal phosphate-dependent enzyme sig. 39 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06285 YggS family pyridoxal phosphate enzyme strong 33 86
  Phocaeicola dorei CL03T12C01 ABI39_RS20000 YggS family pyridoxal phosphate-dependent enzyme sig. 34 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06240 YggS family pyridoxal phosphate-dependent enzyme sig. 34 80
  Bifidobacterium breve UCC2003 BBR_RS11570 YggS family pyridoxal phosphate-dependent enzyme strong 32 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2233 pyridoxal phosphate enzyme, YggS family strong 33 80
  Mycobacterium tuberculosis H37Rv Rv2148c Conserved protein insig. 32 90