Homologs of Rru_A1676 from Rhodospirillum rubrum S1H

Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI)
SEED: tRNA dihydrouridine synthase B (EC 1.-.-.-)

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Rhodospirillum rubrum S1H	Rru_A1676		Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI)	sig.	100	100
o	Magnetospirillum magneticum AMB-1	AMB_RS11940		tRNA dihydrouridine synthase DusB	insig.	51	86
o	Azospirillum brasilense Sp245	AZOBR_RS14420		tRNA-dihydrouridine synthase	sig.	49	86
o	Azospirillum sp. SherDot2	MPMX19_01110		tRNA-dihydrouridine synthase B	insig.	46	86
o	Dechlorosoma suillum PS	Dsui_1593		putative TIM-barrel protein, nifR3 family	strong	45	91
o	Sphingomonas koreensis DSMZ 15582	Ga0059261_0140		tRNA-U20-dihydrouridine synthase	strong	47	88
o	Xanthobacter sp. DMC5	GFF850		tRNA-dihydrouridine synthase B	insig.	51	81
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04249		tRNA-U20-dihydrouridine synthase	insig.	50	80
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.4303.1		tRNA dihydrouridine synthase B (EC 1.-.-.-)	insig.	47	89
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS07650		tRNA dihydrouridine synthase DusB	insig.	47	86
o	Rhodopseudomonas palustris CGA009	TX73_013410		tRNA dihydrouridine synthase DusB	insig.	47	88
o	Sinorhizobium meliloti 1021	SMc01041		NIFR3-like protein	strong	49	84
o	Ralstonia solanacearum PSI07	RPSI07_RS21520		tRNA dihydrouridine synthase DusB	insig.	47	86
o	Agrobacterium fabrum C58	Atu1444		nitrogen regulation protein	strong	48	90
o	Ralstonia solanacearum GMI1000	RS_RS02515		tRNA dihydrouridine synthase DusB	insig.	47	86
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS11695		tRNA dihydrouridine synthase DusB	insig.	46	86
o	Ralstonia solanacearum UW163	UW163_RS01890		tRNA dihydrouridine synthase DusB	insig.	46	86
o	Variovorax sp. OAS795	ABID97_RS24735		tRNA dihydrouridine synthase DusB	insig.	48	86
o	Paraburkholderia sabiae LMG 24235	QEN71_RS26770		tRNA dihydrouridine synthase DusB	insig.	48	80
o	Variovorax sp. SCN45	GFF2144		tRNA-dihydrouridine synthase DusB	cofit	48	86
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS11525		tRNA dihydrouridine synthase DusB	insig.	48	87
o	Rhodanobacter denitrificans MT42	LRK55_RS11875		tRNA dihydrouridine synthase DusB	cofit	48	87
o	Pseudomonas sp. S08-1	OH686_07610		tRNA-dihydrouridine synthase DusB	sig.	47	81
o	Marinobacter adhaerens HP15	HP15_3225		tRNA-dihydrouridine synthase B	sig.	45	88
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS12140		tRNA dihydrouridine synthase DusB	insig.	48	87
o	Pseudomonas stutzeri RCH2	Psest_1016		putative TIM-barrel protein, nifR3 family	sig.	43	91
o	Burkholderia phytofirmans PsJN	BPHYT_RS16585		tRNA-dihydrouridine synthase B	insig.	50	80
o	Lysobacter sp. OAE881	ABIE51_RS16450		tRNA dihydrouridine synthase DusB	insig.	45	89
o	Alteromonas macleodii MIT1002	MIT1002_03957		putative tRNA-dihydrouridine synthase	sig.	43	90
o	Kangiella aquimarina DSM 16071	B158DRAFT_0164		tRNA-U20-dihydrouridine synthase	strong	41	90
o	Rhodanobacter sp. FW510-T8	OKGIIK_11770	dusB	tRNA dihydrouridine synthase DusB	insig.	47	88
o	Paraburkholderia graminis OAS925	ABIE53_003489		tRNA-dihydrouridine synthase B	insig.	48	80
o	Cupriavidus basilensis FW507-4G11	RR42_RS02730		tRNA-dihydrouridine synthase B	insig.	48	80
o	Pseudomonas putida KT2440	PP_4820		tRNA-dihydrouridine synthase B	sig.	46	83
o	Erwinia amylovora T8	OLJFJH_06855		tRNA dihydrouridine synthase DusB	strong	45	83
o	Dinoroseobacter shibae DFL-12	Dshi_1576		putative TIM-barrel protein, nifR3 family (RefSeq)	cofit	50	86
o	Herbaspirillum seropedicae SmR1	HSERO_RS02050		tRNA-dihydrouridine synthase B	sig.	44	86
o	Rhodanobacter sp000427505 FW510-R12	LRK53_RS16445		tRNA dihydrouridine synthase DusB	insig.	46	88
o	Pseudomonas sp. BP01	JOY50_RS17635	dusB	tRNA dihydrouridine synthase DusB	cofit	46	83
o	Pseudomonas aeruginosa PA14	IKLFDK_29300		tRNA dihydrouridine synthase DusB	insig.	45	87
o	Methylophilus sp. DMC18	GFF1646		tRNA-dihydrouridine synthase B	cofit	45	80
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS04810		tRNA dihydrouridine synthase DusB	cofit	50	80
o	Rhizobium sp. OAE497	ABIE40_RS09080		tRNA dihydrouridine synthase DusB	insig.	49	82
	Phaeobacter inhibens DSM 17395	PGA1_c14770		tRNA-dihydrouridine synthase DusB	strong	49	78
o	Shewanella amazonensis SB2B	Sama_3225		tRNA-dihydrouridine synthase B (RefSeq)	strong	43	89
	Castellaniella sp019104865 MT123	ABCV34_RS07960		tRNA dihydrouridine synthase DusB	cofit	47	79
o	Pectobacterium carotovorum WPP14	HER17_RS20235		tRNA dihydrouridine synthase DusB	cofit	44	88
o	Rahnella sp. WP5	EX31_RS12180		tRNA dihydrouridine synthase DusB	cofit	43	86
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF634		tRNA dihydrouridine synthase B (EC 1.-.-.-)	insig.	43	87
o	Serratia liquefaciens MT49	IAI46_22775		tRNA dihydrouridine synthase DusB	insig.	44	83
o	Pseudomonas fluorescens FW300-N2E3	AO353_13660		tRNA-dihydrouridine synthase B	sig.	46	81
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_1313		tRNA dihydrouridine synthase B (EC 1.-.-.-)	sig.	44	86
o	Pseudomonas syringae pv. syringae B728a	Psyr_4404		tRNA-U20-dihydrouridine synthase	insig.	42	92
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_4404		tRNA-U20-dihydrouridine synthase	insig.	42	92
o	Pseudomonas sp. RS175	PFR28_05216		tRNA-dihydrouridine synthase B	sig.	46	81
o	Pseudomonas sp. SVBP6	COO64_RS18315	dusB	tRNA dihydrouridine synthase DusB	insig.	44	91
o	Pseudomonas simiae WCS417	PS417_02950		tRNA-dihydrouridine synthase B	sig.	44	87
o	Pseudomonas sp. DMC3	GFF3310		tRNA-dihydrouridine synthase B	cofit	45	81
o	Escherichia coli BL21	ECD_03118		tRNA-dihydrouridine synthase B	strong	42	86
o	Escherichia fergusonii Becca	EFB2_00564		tRNA-dihydrouridine synthase B	cofit	42	86
o	Escherichia coli ECOR27	NOLOHH_09470	dusB	tRNA dihydrouridine synthase DusB	strong	42	86
o	Escherichia coli ECOR38	HEPCGN_16505	dusB	tRNA dihydrouridine synthase DusB	strong	42	86
o	Escherichia coli ECRC100	OKFHMN_17685	dusB	tRNA dihydrouridine synthase DusB	strong	42	86
o	Escherichia coli ECRC101	MCAODC_08205	dusB	tRNA dihydrouridine synthase DusB	strong	42	86
o	Escherichia coli ECRC102	NIAGMN_15445	dusB	tRNA dihydrouridine synthase DusB	strong	42	86
o	Escherichia coli ECRC62	BNILDI_02050	dusB	tRNA dihydrouridine synthase DusB	cofit	42	86
o	Escherichia coli Nissle 1917	ECOLIN_RS18725		tRNA dihydrouridine synthase DusB	strong	42	86
o	Escherichia coli BW25113	b3260	dusB	tRNA-dihydrouridine synthase B (NCBI)	strong	42	86
o	Pseudomonas fluorescens SBW25	PFLU_RS03025		tRNA dihydrouridine synthase DusB	insig.	44	87
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS03025		tRNA dihydrouridine synthase DusB	strong	44	87
o	Enterobacter sp. TBS_079	MPMX20_04169		tRNA-dihydrouridine synthase B	strong	42	86
o	Acinetobacter radioresistens SK82	MPMX26_02127		tRNA-dihydrouridine synthase B	insig.	41	86
o	Klebsiella michiganensis M5al	BWI76_RS25565		tRNA dihydrouridine synthase DusB	no data	42	86
o	Enterobacter asburiae PDN3	EX28DRAFT_3313		putative TIM-barrel protein, nifR3 family	insig.	42	86
o	Dickeya dianthicola 67-19	HGI48_RS01295		tRNA dihydrouridine synthase DusB	insig.	43	86
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_55		tRNA dihydrouridine synthase B (EC 1.-.-.-)	strong	45	81
o	Pseudomonas fluorescens FW300-N2C3	AO356_08215		tRNA-dihydrouridine synthase B	strong	45	81
o	Synechocystis sp000284455 PCC 6803	SGL_RS14330		tRNA dihydrouridine synthase DusB	insig.	40	85
o	Dickeya dianthicola ME23	DZA65_RS01355		tRNA dihydrouridine synthase DusB	cofit	43	86
o	Shewanella oneidensis MR-1	SO0394		conserved hypothetical protein (NCBI ptt file)	strong	42	88
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_3517		tRNA dihydrouridine synthase B (EC 1.-.-.-)	strong	45	81
o	Acidovorax sp. GW101-3H11	Ac3H11_3996		tRNA dihydrouridine synthase B (EC 1.-.-.-)	sig.	45	87
o	Shewanella loihica PV-4	Shew_0330		nifR3 family TIM-barrel protein (RefSeq)	strong	43	88
o	Dickeya dadantii 3937	DDA3937_RS01375		tRNA dihydrouridine synthase DusB	strong	43	86
o	Shewanella sp. ANA-3	Shewana3_0399		nifR3 family TIM-barrel protein (RefSeq)	strong	42	88
o	Pantoea sp. MT58	IAI47_02385		tRNA dihydrouridine synthase DusB	sig.	42	86
o	Vibrio cholerae E7946 ATCC 55056	CSW01_01495		tRNA dihydrouridine synthase DusB	insig.	43	83
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2124		tRNA dihydrouridine synthase B (EC 1.-.-.-)	insig.	45	70
	Caulobacter crescentus NA1000	CCNA_01813		tRNA-dihydrouridine synthase	strong	46	79
	Caulobacter crescentus NA1000 Δfur	CCNA_01813		tRNA-dihydrouridine synthase	cofit	46	79
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00445		putative tRNA-dihydrouridine synthase	sig.	45	70
o	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_17860		tRNA dihydrouridine synthase DusB	cofit	37	88
	Escherichia coli ECRC98	JDDGAC_21310	dusB	tRNA dihydrouridine synthase DusB	cofit	45	70
	Escherichia coli ECRC99	KEDOAH_10465	dusB	tRNA dihydrouridine synthase DusB	no data	45	70
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS21125		tRNA dihydrouridine synthase DusB	sig.	36	85
o	Phocaeicola dorei CL03T12C01	ABI39_RS06125		tRNA dihydrouridine synthase DusB	cofit	37	86
o	Bacteroides stercoris CC31F	HMPREF1181_RS01530		tRNA dihydrouridine synthase DusB	cofit	37	86
o	Bacteroides ovatus ATCC 8483	BACOVA_02724		TIM-barrel protein, nifR3 family	insig.	36	88
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS22340		tRNA dihydrouridine synthase DusB	insig.	35	87
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS10945		tRNA dihydrouridine synthase DusB	cofit	35	86