Conservation of cofitness between CSW01_04375 and CSW01_12100 in Vibrio cholerae E7946 ATCC 55056

121 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04375 SsrA-binding protein 1.0 CSW01_12100 carbamoyl-phosphate synthase large chain 0.56 6
Escherichia coli ECRC99 0.72 KEDOAH_07095 smpB SsrA-binding protein SmpB 0.87 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli BL21 0.72 ECD_02508 tmRNA-binding trans-translation protein 0.87 ECD_00037 carbamoyl-phosphate synthase large subunit low > 61
Escherichia coli ECRC62 0.72 BNILDI_11600 smpB SsrA-binding protein SmpB 0.87 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli ECRC102 0.72 NIAGMN_18895 smpB SsrA-binding protein SmpB 0.87 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECOR38 0.72 HEPCGN_20245 smpB SsrA-binding protein SmpB 0.87 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.72 MCAODC_11650 smpB SsrA-binding protein SmpB 0.87 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit
Escherichia coli BW25113 0.72 b2620 smpB SsrA-binding protein (NCBI) 0.87 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) low > 76
Escherichia coli ECRC98 0.72 JDDGAC_24790 smpB SsrA-binding protein SmpB 0.87 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01087 SsrA-binding protein 0.87 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 74
Escherichia coli Nissle 1917 0.72 ECOLIN_RS14795 SsrA-binding protein SmpB 0.87 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC100 0.72 OKFHMN_21125 smpB SsrA-binding protein SmpB 0.87 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit
Escherichia fergusonii Becca 0.72 EFB2_01273 SsrA-binding protein 0.87 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECOR27 0.72 NOLOHH_12795 smpB SsrA-binding protein SmpB 0.87 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4158 tmRNA-binding protein SmpB 0.87 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Enterobacter sp. TBS_079 0.70 MPMX20_03490 SsrA-binding protein 0.87 MPMX20_00740 Carbamoyl-phosphate synthase large chain low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2723 SsrA-binding protein 0.87 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Dickeya dadantii 3937 0.70 DDA3937_RS04305 SsrA-binding protein SmpB 0.86 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit
Klebsiella pneumoniae MKP103 0.70 KDGMDA_02270 SsrA-binding protein SmpB 0.87 KDGMDA_12710 carbamoyl-phosphate synthase large subunit low > 95
Dickeya dianthicola 67-19 0.70 HGI48_RS04300 SsrA-binding protein SmpB 0.86 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS04215 SsrA-binding protein SmpB 0.86 DZA65_RS19380 carbamoyl-phosphate synthase large subunit low > 75
Klebsiella michiganensis M5al 0.69 BWI76_RS21580 SsrA-binding protein 0.87 BWI76_RS04470 carbamoyl phosphate synthase large subunit low > 92
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS14680 SsrA-binding protein SmpB 0.85 PagCFBP13505_RS12880 carbamoyl-phosphate synthase large subunit
Pantoea sp. MT58 0.68 IAI47_04790 SsrA-binding protein SmpB 0.86 IAI47_16115 carbamoyl-phosphate synthase large subunit
Erwinia tracheiphila SCR3 0.68 LU632_RS17025 smpB SsrA-binding protein SmpB 0.85 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit
Rahnella sp. WP5 0.68 EX31_RS21740 SsrA-binding protein SmpB 0.86 EX31_RS03830 carbamoyl-phosphate synthase large subunit
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_26965 smpB SsrA-binding protein SmpB 0.85 IJEDHG_06145 carB carbamoyl-phosphate synthase large subunit
Pectobacterium carotovorum WPP14 0.67 HER17_RS17440 SsrA-binding protein SmpB 0.87 HER17_RS02900 carbamoyl-phosphate synthase large subunit low > 75
Erwinia amylovora T8 0.67 OLJFJH_10155 SsrA-binding protein SmpB 0.84 OLJFJH_01395 carbamoyl-phosphate synthase large subunit
Serratia liquefaciens MT49 0.63 IAI46_19655 SsrA-binding protein SmpB 0.85 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 87
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_0969 SsrA-binding protein 0.73 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Alteromonas macleodii MIT1002 0.59 MIT1002_01806 Small protein B 0.81 MIT1002_01467 Carbamoyl-phosphate synthase large chain
Shewanella sp. ANA-3 0.57 Shewana3_2952 smpB SsrA-binding protein (RefSeq) 0.86 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq)
Shewanella oneidensis MR-1 0.57 SO1473 smpB SsrA-binding protein (NCBI ptt file) 0.86 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file)
Shewanella amazonensis SB2B 0.55 Sama_2388 smpB SsrA-binding protein (RefSeq) 0.87 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq)
Shewanella loihica PV-4 0.55 Shew_1268 smpB SsrA-binding protein (RefSeq) 0.87 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq)
Marinobacter adhaerens HP15 0.55 HP15_3090 SsrA-binding protein 0.75 HP15_3077 carbamoyl-phosphate synthase, large subunit
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.3437.1 tmRNA-binding protein SmpB 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Acinetobacter radioresistens SK82 0.54 MPMX26_00737 SsrA-binding protein 0.73 MPMX26_00766 Carbamoyl-phosphate synthase large chain low > 36
Acinetobacter baumannii LAC-4 0.54 RR41_RS15055 SsrA-binding protein SmpB 0.74 RR41_RS04155 carbamoyl-phosphate synthase large subunit
Lysobacter sp. OAE881 0.53 ABIE51_RS11680 SsrA-binding protein SmpB 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Pseudomonas sp. S08-1 0.53 OH686_17025 SsrA-binding protein 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS05700 SsrA-binding protein SmpB 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. SVBP6 0.52 COO64_RS15300 smpB SsrA-binding protein SmpB 0.75 COO64_RS15240 carB carbamoyl-phosphate synthase large subunit low > 93
Pseudomonas stutzeri RCH2 0.52 Psest_0957 SsrA-binding protein 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Pseudomonas sp. BP01 0.52 JOY50_RS26715 smpB SsrA-binding protein SmpB 0.75 JOY50_RS26765 carB carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_05690 SsrA-binding protein 0.76 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas segetis P6 0.51 MPMX49_01175 SsrA-binding protein 0.75 MPMX49_01187 Carbamoyl-phosphate synthase large chain
Pseudomonas aeruginosa PA14 0.51 IKLFDK_29750 SsrA-binding protein SmpB 0.76 IKLFDK_29815 carbamoyl-phosphate synthase large subunit low > 98
Pseudomonas aeruginosa MRSN321 0.51 DY961_RS09600 smpB;go_function=RNA SsrA-binding protein SmpB 0.76 DY961_RS09535 carB;go_function=ATP carbamoyl-phosphate synthase large subunit low > 100
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3378 tmRNA-binding protein SmpB 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_07540 SsrA-binding protein 0.75 AO356_07480 carbamoyl phosphate synthase large subunit low > 104
Pseudomonas aeruginosa PUPa3 0.51 DQ20_RS52440 smpB;go_function=RNA SsrA-binding protein SmpB 0.76 DQ20_RS52500 carB;go_function=ATP carbamoyl-phosphate synthase large subunit 0.38 7
Pseudomonas putida KT2440 0.51 PP_4733 SsrA-binding protein 0.75 PP_4723 Carbamoyl-phosphate synthase large chain
Dechlorosoma suillum PS 0.51 Dsui_2675 SsrA-binding protein 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Pseudomonas sp. RS175 0.50 PFR28_00065 SsrA-binding protein 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_07375 smpB SsrA-binding protein SmpB 0.69 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit low > 53
Rhodanobacter sp000427505 FW510-R12 0.50 LRK53_RS11435 SsrA-binding protein SmpB 0.69 LRK53_RS11360 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans MT42 0.50 LRK55_RS17780 SsrA-binding protein SmpB 0.69 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS17925 SsrA-binding protein SmpB 0.69 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum PSI07 0.49 RPSI07_RS17000 SsrA-binding protein SmpB 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.49 RS_RS07145 SsrA-binding protein 0.66 RS_RS07630 carbamoyl-phosphate synthase large chain
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_4203 SsrA-binding protein 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_4203 SsrA-binding protein 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS00490 SsrA-binding protein SmpB 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum UW163 0.49 UW163_RS13820 SsrA-binding protein SmpB 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1184 tmRNA-binding protein SmpB 0.76 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas sp. DMC3 0.48 GFF4965 SsrA-binding protein 0.76 GFF4977 Carbamoyl-phosphate synthase large chain
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS11940 SsrA-binding protein SmpB 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS11775 single-stranded DNA-binding protein 0.66 RR42_RS13510 carbamoyl phosphate synthase large subunit
Methylophilus sp. DMC18 0.48 GFF1142 SsrA-binding protein 0.73 GFF312 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_5112 tmRNA-binding protein SmpB 0.76 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Castellaniella sp019104865 MT123 0.47 ABCV34_RS04010 SsrA-binding protein SmpB 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_04969 SsrA-binding protein 0.76 GEMAOFIL_04958 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens SBW25 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas orientalis W4I3 0.47 QF045_RS26350 SsrA-binding protein SmpB 0.76 QF045_RS26295 carbamoyl-phosphate synthase large subunit
Pseudomonas simiae WCS417 0.47 PS417_24095 SsrA-binding protein 0.76 PS417_24040 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Variovorax sp. OAS795 0.47 ABID97_RS16435 SsrA-binding protein SmpB 0.66 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Variovorax sp. SCN45 0.46 GFF213 tmRNA-binding protein SmpB 0.66 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Paraburkholderia graminis OAS925 0.46 ABIE53_002482 SsrA-binding protein 0.66 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00630 SsrA-binding protein 0.66 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12040 single-stranded DNA-binding protein 0.66 BPHYT_RS14190 carbamoyl phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2861 tmRNA-binding protein SmpB 0.67 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS11000 single-stranded DNA-binding protein 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01254 SsrA-binding protein 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4352 tmRNA-binding protein SmpB 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Caulobacter crescentus NA1000 0.42 CCNA_01254 SsrA-binding protein 0.60 CCNA_02994 carbamoyl-phosphate synthase large chain
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS06520 SsrA-binding protein SmpB 0.66 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Dinoroseobacter shibae DFL-12 0.42 Dshi_0147 SsrA-binding protein (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq)
Rhizobium sp. OAE497 0.41 ABIE40_RS06035 SsrA-binding protein SmpB 0.59 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS05480 SsrA-binding protein SmpB 0.59 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Rhodospirillum rubrum S1H 0.41 Rru_A1864 SmpB protein (NCBI) 0.61 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI)
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29450 SsrA-binding protein SmpB 0.58 PGA1_c24560 carbamoyl-phosphate synthase large chain
Sphingobium sp. HT1-2 0.40 GFF3116 tmRNA-binding protein SmpB 0.59 GFF2087 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0212 SsrA-binding protein 0.60 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Desulfovibrio vulgaris Hildenborough JW710 0.40 DVU0828 smpB SsrA-binding protein (TIGR) 0.59 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR)
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_1795 smpB SsrA-binding protein 0.57 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit
Sinorhizobium meliloti 1021 0.39 SMc02405 SsrA-binding protein 0.59 SMc01215 carbamoyl phosphate synthase large subunit
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_2876 smpB SsrA-binding protein (RefSeq) 0.58 DvMF_2306 carbamoyl-phosphate synthase, large subunit (RefSeq)
Magnetospirillum magneticum AMB-1 0.38 AMB_RS12810 SsrA-binding protein 0.61 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Azospirillum brasilense Sp245 0.38 AZOBR_RS08425 single-stranded DNA-binding protein 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Synechocystis sp000284455 PCC 6803 0.38 SGL_RS11585 SsrA-binding protein SmpB 0.57 SGL_RS14530 carbamoyl-phosphate synthase large subunit
Azospirillum sp. SherDot2 0.38 MPMX19_01218 SsrA-binding protein 0.59 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Agrobacterium fabrum C58 0.37 Atu1025 SSRA-binding protein 0.58 Atu2178 carbamoylphosphate synthase large subunit
Rhodopseudomonas palustris CGA009 0.37 TX73_013930 SsrA-binding protein SmpB 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit
Fusobacterium nucleatum SB010 0.37 HUW76_06090 SsrA-binding protein SmpB 0.46 HUW76_08750 carbamoyl-phosphate synthase large subunit
Mycobacterium tuberculosis H37Rv 0.36 Rv3100c Probable SSRA-binding protein SmpB 0.49 Rv1384 Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain)
Echinicola vietnamensis KMM 6221, DSM 17526 0.35 Echvi_2086 SsrA-binding protein 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Bosea sp. OAE506 0.35 ABIE41_RS19950 SsrA-binding protein SmpB 0.57 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Xanthobacter sp. DMC5 0.34 GFF405 SsrA-binding protein 0.60 GFF4681 Carbamoyl-phosphate synthase large chain
Bifidobacterium breve UCC2003 0.33 BBR_RS13045 SsrA-binding protein 0.49 BBR_RS13635 carbamoyl-phosphate synthase large subunit
Cellulophaga baltica 18 0.31 M666_RS17575 SsrA-binding protein SmpB 0.42 M666_RS18155 carbamoyl-phosphate synthase large subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_04675 SsrA-binding protein 0.43 CA264_15430 carbamoyl phosphate synthase large subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS00810 SsrA-binding protein SmpB 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS12595 SsrA-binding protein 0.36 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS16680 SsrA-binding protein 0.36 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS04945 SsrA-binding protein 0.35 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit
Bacteroides ovatus ATCC 8483 0.26 BACOVA_01261 SsrA-binding protein 0.36 BACOVA_03752 carbamoyl-phosphate synthase, large subunit low > 96
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS14950 SsrA-binding protein 0.36 HMPREF1078_RS01300 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS10920 SsrA-binding protein 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Bacteroides thetaiotaomicron VPI-5482 0.25 BT0179 SsrA-binding protein (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file)

Not shown: 0 genomes with orthologs for CSW01_04375 only; 2 genomes with orthologs for CSW01_12100 only