Homologs of PP_4808 from Pseudomonas putida KT2440

23S rRNA m3psi1915 methyltransferase
SEED: LSU m3Psi1915 methyltransferase RlmH
KEGG: hypothetical protein

120 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pseudomonas putida KT2440	PP_4808		23S rRNA m3psi1915 methyltransferase	sig.	100	100
o	Pseudomonas sp. BP01	JOY50_RS17695	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	99	90
o	Pseudomonas sp. SVBP6	COO64_RS15615	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	95	90
o	Pseudomonas syringae pv. syringae B728a	Psyr_4366		Protein of unknown function DUF163	no data	94	90
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_4366		Protein of unknown function DUF163	sig.	94	90
o	Pseudomonas fluorescens FW300-N2C3	AO356_15305		50S rRNA methyltransferase	strong	94	90
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4996		LSU m3Psi1915 methyltransferase RlmH	strong	94	90
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_1359		LSU m3Psi1915 methyltransferase RlmH	insig.	93	90
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2691		LSU m3Psi1915 methyltransferase RlmH	no data	93	90
o	Pseudomonas fluorescens FW300-N2E3	AO353_06480		50S rRNA methyltransferase	sig.	93	90
o	Pseudomonas fluorescens SBW25	PFLU_RS26660		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	93	90
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS26660		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	93	90
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_05099		Ribosomal RNA large subunit methyltransferase H	no data	93	90
o	Pseudomonas orientalis W4I3	QF045_RS27015		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	93	90
o	Pseudomonas simiae WCS417	PS417_24730		50S rRNA methyltransferase	no data	93	90
o	Pseudomonas sp. RS175	PFR28_03869		Ribosomal RNA large subunit methyltransferase H	sig.	92	90
o	Pseudomonas aeruginosa MRSN321	DY961_RS12835	rlmH;go_function=methyltransferase	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	92	90
o	Pseudomonas aeruginosa PUPa3	DQ20_RS48165	rlmH;go_function=methyltransferase	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	92	90
o	Pseudomonas sp. DMC3	GFF3879		Ribosomal RNA large subunit methyltransferase H	insig.	92	90
o	Pseudomonas aeruginosa PA14	IKLFDK_20650		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	92	90
o	Pseudomonas sp. S08-1	OH686_09325		rRNA large subunit m3Psi methyltransferase RlmH	insig.	90	90
o	Pseudomonas stutzeri RCH2	Psest_0511		rRNA large subunit m3Psi methyltransferase RlmH	sig.	88	90
o	Pseudomonas segetis P6	ACVTMO_RS05210	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	85	90
o	Vibrio cholerae E7946 ATCC 55056	CSW01_04865		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	59	90
o	Pantoea sp. MT58	IAI47_14020		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	56	90
o	Rahnella sp. WP5	EX31_RS23125		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	55	90
o	Serratia liquefaciens MT49	IAI46_05935		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	90
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS03285		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	57	90
o	Erwinia amylovora T8	OLJFJH_17220		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	90
o	Alteromonas macleodii MIT1002	MIT1002_01852		Ribosomal RNA large subunit methyltransferase H	no data	55	90
o	Dickeya dadantii 3937	DDA3937_RS06175		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	55	90
o	Dickeya dianthicola ME23	DZA65_RS06565		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	55	90
o	Pectobacterium carotovorum WPP14	HER17_RS15240		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	55	90
o	Escherichia coli ECOR27	NOLOHH_23735	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	57	90
o	Escherichia coli ECOR38	HEPCGN_00915	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	57	90
o	Escherichia coli ECRC100	OKFHMN_07360	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	57	90
o	Escherichia coli ECRC101	MCAODC_26575	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	57	90
o	Escherichia coli ECRC102	NIAGMN_05415	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	57	90
o	Escherichia coli ECRC62	BNILDI_21745	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	57	90
o	Escherichia coli ECRC98	JDDGAC_11005	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	57	90
o	Escherichia coli ECRC99	KEDOAH_20610	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	57	90
o	Escherichia coli BL21	ECD_00605		23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent	no data	56	90
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_03070		Ribosomal RNA large subunit methyltransferase H	no data	56	90
o	Escherichia coli Nissle 1917	ECOLIN_RS03465		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	56	90
o	Escherichia coli BW25113	b0636	ybeA	hypothetical protein (NCBI)	sig.	56	90
o	Dickeya dianthicola 67-19	HGI48_RS06220		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	55	90
o	Escherichia fergusonii Becca	EFB2_03456		Ribosomal RNA large subunit methyltransferase H	sig.	56	90
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4549		LSU m3Psi1915 methyltransferase RlmH	strong	56	90
o	Marinobacter adhaerens HP15	HP15_604		conserved hypothetical protein CHP00246	sig.	55	90
o	Shewanella loihica PV-4	Shew_2934		SPOUT methyltransferase superfamily protein (RefSeq)	insig.	54	90
o	Klebsiella pneumoniae MKP103	KDGMDA_16400		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	57	90
o	Klebsiella pneumoniae MRSN742743	KFA93_RS02225	rlmH;go_function=methyltransferase	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	57	90
o	Erwinia tracheiphila HP pepo 2.2	IJEDHG_02460	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	55	90
o	Enterobacter asburiae PDN3	EX28DRAFT_2327		rRNA large subunit m3Psi methyltransferase RlmH	no data	56	90
o	Enterobacter sp. TBS_079	MPMX20_01295		Ribosomal RNA large subunit methyltransferase H	insig.	56	90
o	Klebsiella michiganensis M5al	BWI76_RS08040		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	56	90
o	Shewanella sp. ANA-3	Shewana3_0996		rRNA large subunit methyltransferase (RefSeq)	strong	55	90
o	Erwinia tracheiphila SCR3	LU632_RS16370	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	54	90
o	Shewanella oneidensis MR-1	SO1169		conserved hypothetical protein TIGR00246 (NCBI ptt file)	strong	55	90
o	Shewanella amazonensis SB2B	Sama_2587		rRNA large subunit methyltransferase (RefSeq)	insig.	54	90
o	Kangiella aquimarina DSM 16071	B158DRAFT_0085		rRNA large subunit m3Psi methyltransferase RlmH	strong	52	90
o	Rhodanobacter sp000427505 FW510-R12	LRK53_RS07250		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	57	90
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS09055		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	90
o	Rhodanobacter sp. FW510-T8	OKGIIK_09750	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	55	90
o	Rhodanobacter denitrificans MT42	LRK55_RS02450		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	90
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS02695		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	56	90
o	Lysobacter sp. OAE881	ABIE51_RS06755		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	49	90
o	Acinetobacter baumannii LAC-4	RR41_RS09070		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	42	90
o	Acinetobacter radioresistens SK82	MPMX26_02301		Ribosomal RNA large subunit methyltransferase H	insig.	42	90
o	Castellaniella sp019104865 MT123	ABCV34_RS02530		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	44	90
o	Paraburkholderia sabiae LMG 24235	QEN71_RS24420		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	47	90
o	Paraburkholderia graminis OAS925	ABIE53_001541		23S rRNA (pseudouridine1915-N3)-methyltransferase	no data	43	90
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04517		23S rRNA (pseudouridine1915-N3)-methyltransferase	insig.	43	90
o	Burkholderia phytofirmans PsJN	BPHYT_RS06385		ribosomal RNA large subunit methyltransferase H	insig.	46	90
o	Cupriavidus basilensis FW507-4G11	RR42_RS04710		50S rRNA methyltransferase	insig.	41	90
o	Ralstonia solanacearum GMI1000	RS_RS11015		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	43	90
o	Ralstonia solanacearum PSI07	RPSI07_RS13660		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	43	90
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS03565		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	42	90
o	Ralstonia solanacearum UW163	UW163_RS10105		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	42	90
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1876.1		LSU m3Psi1915 methyltransferase RlmH	no data	46	81
o	Variovorax sp. OAS795	ABID97_RS16715		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	43	90
o	Variovorax sp. SCN45	GFF298		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177)	insig.	43	90
o	Herbaspirillum seropedicae SmR1	HSERO_RS17780		50S rRNA methyltransferase	insig.	38	90
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS15430		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	39	90
o	Methylophilus sp. DMC18	GFF827		Ribosomal RNA large subunit methyltransferase H	cofit	43	90
o	Acidovorax sp. GW101-3H11	Ac3H11_2418		LSU m3Psi1915 methyltransferase RlmH	insig.	42	87
o	Dechlorosoma suillum PS	Dsui_0451		hypothetical protein	insig.	42	90
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF4529		LSU m3Psi1915 methyltransferase RlmH	insig.	43	90
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS17055		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	34	90
o	Methanococcus maripaludis JJ	MMJJ_RS09010		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	30	88
o	Methanococcus maripaludis S2	MMP_RS05365		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	30	88
o	Cellulophaga baltica 18	M666_RS17950		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	31	88
o	Bacteroides stercoris CC31F	HMPREF1181_RS10755		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	34	90
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS15935		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	32	90
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS16715		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	32	90
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS16470		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	28	90
o	Phocaeicola dorei CL03T12C01	ABI39_RS11895		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	31	90
o	Bifidobacterium breve UCC2003	BBR_RS19685		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	32	90
o	Bacteroides thetaiotaomicron VPI-5482	BT1562		conserved hypothetical protein (NCBI ptt file)	insig.	33	87
	Rhodospirillum rubrum S1H	Rru_A1235		Protein of unknown function DUF163 (NCBI)	sig.	44	59
o	Bacteroides ovatus ATCC 8483	BACOVA_04305		putative rRNA large subunit m3Psi methyltransferase RlmH	sig.	32	87
o	Azospirillum brasilense Sp245	AZOBR_RS04060		50S rRNA methyltransferase	insig.	37	90
o	Rhizobium sp. OAE497	ABIE40_RS18965		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	35	90
o	Azospirillum sp. SherDot2	MPMX19_01940		Ribosomal RNA large subunit methyltransferase H	insig.	35	90
o	Fusobacterium nucleatum SB010	HUW76_07715		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	26	90
	Sinorhizobium meliloti 1021	SMc03781		rRNA large subunit methyltransferase	insig.	37	90
	Desulfovibrio vulgaris Hildenborough JW710	DVU1254		conserved hypothetical protein (TIGR)	insig.	33	88
	Caulobacter crescentus NA1000	CCNA_03546		rRNA large subunit methyltransferase	sig.	42	52
	Caulobacter crescentus NA1000 Δfur	CCNA_03546		rRNA large subunit methyltransferase	cofit	42	52
	Desulfovibrio vulgaris Miyazaki F	DvMF_0845		protein of unknown function DUF163 (RefSeq)	insig.	33	88
	Phaeobacter inhibens DSM 17395	PGA1_c29750		putative ribosomal RNA large subunit methyltransferase	sig.	39	65
	Bosea sp. OAE506	ABIE41_RS07565		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	40	56
	Rhodopseudomonas palustris CGA009	TX73_000870		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	40	54
	Dinoroseobacter shibae DFL-12	Dshi_0088		protein of unknown function DUF163 (RefSeq)	insig.	35	70
	Agrobacterium fabrum C58	Atu2776		hypothetical protein	insig.	38	66
	Magnetospirillum magneticum AMB-1	AMB_RS20655		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	31	90
	Xanthobacter sp. DMC5	GFF3949		Ribosomal RNA large subunit methyltransferase H	no data	40	50
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS14825		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	30	90
	Sphingomonas koreensis DSMZ 15582	Ga0059261_2503		Predicted SPOUT methyltransferase	insig.	32	55
	Sphingobium sp. HT1-2	GFF751		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177)	cofit	30	55