Homologs of PP_4496 from Pseudomonas putida KT2440

23S rRNA pseudouridine 2605 synthase
SEED: Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase B

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4496 23S rRNA pseudouridine 2605 synthase no data 100 100
o Pseudomonas sp. BP01 JOY50_RS01055 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 98 100
o Pseudomonas sp. SVBP6 COO64_RS21735 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 80 100
o Pseudomonas sp. RS175 PFR28_03314 hypothetical protein no data 74 100
o Pseudomonas syringae pv. syringae B728a Psyr_3581 ribosomal large subunit pseudouridine synthase B strong 73 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3581 ribosomal large subunit pseudouridine synthase B strong 73 100
o Pseudomonas fluorescens FW300-N2C3 AO356_18515 pseudouridine synthase insig. 71 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5629 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 71 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04587 hypothetical protein cofit 73 100
o Pseudomonas sp. DMC3 GFF2404 hypothetical protein insig. 72 100
o Pseudomonas simiae WCS417 PS417_22250 pseudouridine synthase sig. 72 100
o Pseudomonas fluorescens SBW25 PFLU_RS23890 pseudouridine synthase cofit 72 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23890 pseudouridine synthase sig. 72 100
o Pseudomonas orientalis W4I3 QF045_RS24380 pseudouridine synthase cofit 77 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3555 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 70 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4401 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 71 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18540 pseudouridine synthase strong 69 100
o Pseudomonas segetis P6 ACVTMO_RS14420 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 75 98
o Pseudomonas stutzeri RCH2 Psest_1999 pseudouridine synthase insig. 73 99
o Pseudomonas sp. S08-1 OH686_20820 LSU rRNA pseudouridine(2605) synthase cofit 73 98
o Pseudomonas aeruginosa MRSN321 DY961_RS01040 rluB;go_function=RNA 23S rRNA pseudouridine(2605) synthase RluB strong 72 96
o Pseudomonas aeruginosa PA14 IKLFDK_16155 23S rRNA pseudouridine(2605) synthase RluB strong 72 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS34495 rluB;go_function=RNA 23S rRNA pseudouridine(2605) synthase RluB strong 72 96
o Marinobacter adhaerens HP15 HP15_1530 RNA-binding S4 domain protein sig. 57 86
o Shewanella amazonensis SB2B Sama_2124 pseudouridine synthase, Rsu (RefSeq) strong 54 82
  Shewanella sp. ANA-3 Shewana3_1525 ribosomal large subunit pseudouridine synthase B (RefSeq) strong 55 76
  Shewanella loihica PV-4 Shew_2246 pseudouridine synthase (RefSeq) sig. 57 69
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_23550 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 54 80
o Erwinia tracheiphila SCR3 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 54 80
o Vibrio cholerae E7946 ATCC 55056 CSW01_05970 23S rRNA pseudouridylate synthase B no data 48 92
  Pectobacterium carotovorum WPP14 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB strong 59 69
o Dickeya dianthicola 67-19 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB sig. 52 85
  Klebsiella pneumoniae MKP103 KDGMDA_19590 23S rRNA pseudouridine(2605) synthase RluB sig. 60 69
o Dickeya dianthicola ME23 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB sig. 52 85
o Dickeya dadantii 3937 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB strong 52 85
  Enterobacter sp. TBS_079 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B sig. 60 69
  Enterobacter asburiae PDN3 EX28DRAFT_0940 pseudouridine synthase cofit 60 69
  Klebsiella michiganensis M5al BWI76_RS11880 23S rRNA pseudouridylate synthase B strong 59 69
  Acinetobacter baumannii LAC-4 RR41_RS15215 23S rRNA pseudouridine(2605) synthase RluB cofit 55 75
o Acinetobacter radioresistens SK82 MPMX26_02450 Ribosomal large subunit pseudouridine synthase B strong 52 86
  Rahnella sp. WP5 EX31_RS09940 23S rRNA pseudouridine(2605) synthase RluB cofit 59 68
  Serratia liquefaciens MT49 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB insig. 53 77
  Alteromonas macleodii MIT1002 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B cofit 58 68
  Kangiella aquimarina DSM 16071 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) strong 57 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) sig. 59 69
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06975 23S rRNA pseudouridine(2605) synthase RluB strong 59 67
  Pantoea sp. MT58 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB sig. 59 67
  Erwinia amylovora T8 OLJFJH_13510 23S rRNA pseudouridine(2605) synthase RluB strong 55 75
  Escherichia fergusonii Becca EFB2_02658 Ribosomal large subunit pseudouridine synthase B insig. 59 69
  Escherichia coli Nissle 1917 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB insig. 59 69
  Escherichia coli BL21 ECD_01245 23S rRNA pseudouridine(2605) synthase strong 59 69
  Escherichia coli ECOR27 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 59 69
  Escherichia coli ECOR38 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 59 69
  Escherichia coli ECRC100 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 59 69
  Escherichia coli ECRC101 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 59 69
  Escherichia coli ECRC102 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 59 69
  Escherichia coli ECRC62 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 59 69
  Escherichia coli ECRC98 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 59 69
  Escherichia coli ECRC99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 59 69
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B strong 59 69
  Escherichia coli BW25113 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) strong 59 69
  Dechlorosoma suillum PS Dsui_2725 pseudouridine synthase family protein no data 54 68
o Methylophilus sp. DMC18 GFF891 hypothetical protein insig. 49 87
  Paraburkholderia graminis OAS925 ABIE53_001827 23S rRNA pseudouridine2605 synthase no data 53 68
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05101 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) no data 53 68
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15665 rRNA pseudouridine synthase no data 52 68
  Ralstonia solanacearum UW163 UW163_RS13125 rRNA pseudouridine synthase no data 52 68
  Ralstonia solanacearum PSI07 RPSI07_RS17690 23S rRNA pseudouridylate synthase B strong 52 68
  Cupriavidus basilensis FW507-4G11 RR42_RS12860 pseudouridine synthase strong 52 68
  Burkholderia phytofirmans PsJN BPHYT_RS08050 pseudouridine synthase no data 53 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS23115 pseudouridine synthase no data 54 68
  Castellaniella sp019104865 MT123 ABCV34_RS02110 23S rRNA pseudouridine(2605) synthase RluB no data 49 78
  Herbaspirillum seropedicae SmR1 HSERO_RS18010 pseudouridine synthase strong 53 68
  Lysobacter sp. OAE881 ABIE51_RS08775 pseudouridine synthase sig. 55 70
  Ralstonia solanacearum GMI1000 RS_RS06445 23S rRNA pseudouridylate synthase B strong 51 68
  Ralstonia sp. UNC404CL21Col ABZR87_RS11195 pseudouridine synthase strong 51 68
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2356.1 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) strong 56 72
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4868 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) cofit 49 72
  Variovorax sp. SCN45 GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) cofit 51 68
  Variovorax sp. OAS795 ABID97_RS14200 pseudouridine synthase strong 51 68
  Acidovorax sp. GW101-3H11 Ac3H11_1789 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 51 68
  Rhodanobacter sp. FW510-T8 OKGIIK_06425 Pseudouridine synthase sig. 54 68
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09315 pseudouridine synthase insig. 50 75
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02135 pseudouridine synthase insig. 45 93
  Rhodanobacter denitrificans MT42 LRK55_RS00590 pseudouridine synthase no data 53 68
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00815 pseudouridine synthase strong 53 68
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04200 pseudouridine synthase insig. 40 73
  Rhodopseudomonas palustris CGA009 TX73_005980 pseudouridine synthase insig. 41 72
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 43 63
  Caulobacter crescentus NA1000 CCNA_00230 ribosomal large subunit pseudouridine synthase B sig. 42 62
  Caulobacter crescentus NA1000 Δfur CCNA_00230 ribosomal large subunit pseudouridine synthase B cofit 42 62
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 39 67
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0245 pseudouridine synthase insig. 36 74
  Rhodospirillum rubrum S1H Rru_A0652 Pseudouridine synthase, Rsu (NCBI) cofit 44 61
  Sinorhizobium meliloti 1021 SMc00904 hypothetical protein sig. 42 65
  Agrobacterium fabrum C58 Atu0689 ribosomal large subunit pseudouridine synthase B strong 43 65
  Rhizobium sp. OAE497 ABIE40_RS03760 pseudouridine synthase sig. 43 63
  Xanthobacter sp. DMC5 GFF108 hypothetical protein insig. 40 65
o Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 35 92
  Synechocystis sp000284455 PCC 6803 SGL_RS12865 pseudouridine synthase strong 39 69