Homologs of LRK53_RS03050 from Rhodanobacter sp000427505 FW510-R12

ComF family protein
SEED: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

124 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03050 ComF family protein insig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS09910 ComF family protein insig. 92 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10270 ComF family protein insig. 92 98
o Rhodanobacter sp. FW510-T8 OKGIIK_13640 Competence protein ComF insig. 80 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15860 ComF family protein insig. 74 89
o Lysobacter sp. OAE881 ABIE51_RS01135 ComF family protein insig. 58 90
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.506.1 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 54 87
o Pseudomonas sp. DMC3 GFF77 hypothetical protein cofit 46 89
o Pseudomonas aeruginosa PUPa3 DQ20_RS36875 ComF family protein insig. 48 94
o Pseudomonas aeruginosa MRSN321 DY961_RS22450 ComF family protein insig. 50 94
o Pseudomonas aeruginosa PA14 IKLFDK_22980 amidophosphoribosyltransferase insig. 50 94
o Pseudomonas simiae WCS417 PS417_26010 amidophosphoribosyltransferase insig. 43 89
o Pseudomonas sp. BP01 JOY50_RS17925 ComF family protein insig. 43 91
o Pseudomonas fluorescens SBW25 PFLU_RS27655 ComF family protein insig. 42 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27655 ComF family protein insig. 42 89
o Pseudomonas stutzeri RCH2 Psest_0410 Predicted amidophosphoribosyltransferases insig. 45 89
o Pseudomonas segetis P6 ACVTMO_RS03755 ComF family protein insig. 41 89
o Pseudomonas protegens RBAN4 FABNJH_28680 gntX Protein GntX insig. 44 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1146 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 43 89
o Pseudomonas sp. S08-1 OH686_10360 Competence protein F-related, phosphoribosyltransferase domain / protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 44 88
o Pseudomonas fluorescens FW300-N2E3 AO353_07530 amidophosphoribosyltransferase insig. 42 89
o Pseudomonas syringae pv. syringae B728a Psyr_4688 Phosphoribosyltransferase insig. 42 89
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4688 Phosphoribosyltransferase insig. 42 89
o Pseudomonas sp. SVBP6 COO64_RS22730 ComF family protein insig. 44 89
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05323 hypothetical protein insig. 42 89
o Pseudomonas putida KT2440 PP_0361 putative Competence protein ComF insig. 43 91
o Pseudomonas orientalis W4I3 QF045_RS00420 ComF family protein cofit 41 89
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2485 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 43 82
o Kangiella aquimarina DSM 16071 B158DRAFT_0863 Predicted amidophosphoribosyltransferases insig. 37 88
o Pseudomonas sp. RS175 PFR28_04104 hypothetical protein insig. 42 89
o Marinobacter adhaerens HP15 HP15_2487 competence protein ComF insig. 40 88
o Methylophilus sp. DMC18 GFF1681 hypothetical protein insig. 40 85
o Ralstonia solanacearum PSI07 RPSI07_RS22380 amidophosphoribosyltransferase strong 43 96
o Herbaspirillum seropedicae SmR1 HSERO_RS20810 amidophosphoribosyltransferase strong 39 89
o Azospirillum sp. SherDot2 MPMX19_02427 hypothetical protein insig. 44 88
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4758 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 42 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10930 amidophosphoribosyltransferase no data 43 96
o Ralstonia solanacearum UW163 UW163_RS02650 amidophosphoribosyltransferase insig. 43 96
o Cupriavidus basilensis FW507-4G11 RR42_RS01860 amidophosphoribosyltransferase insig. 43 93
o Pseudomonas fluorescens FW300-N2C3 AO356_14130 amidophosphoribosyltransferase insig. 42 89
o Serratia liquefaciens MT49 IAI46_23830 DNA utilization protein GntX insig. 41 88
o Shewanella amazonensis SB2B Sama_3504 competence protein ComF (RefSeq) insig. 41 90
o Shewanella sp. ANA-3 Shewana3_4009 competence protein ComF (RefSeq) insig. 38 90
o Dechlorosoma suillum PS Dsui_1296 putative amidophosphoribosyltransferase cofit 39 92
o Erwinia amylovora T8 OLJFJH_04185 DNA utilization protein GntX insig. 42 89
o Pectobacterium carotovorum WPP14 HER17_RS01550 DNA utilization protein GntX insig. 38 88
o Paraburkholderia graminis OAS925 ABIE53_000670 ComF family protein insig. 40 90
o Dickeya dianthicola 67-19 HGI48_RS19780 DNA utilization protein GntX insig. 39 89
o Dickeya dianthicola ME23 DZA65_RS20870 DNA utilization protein GntX insig. 39 89
o Rahnella sp. WP5 EX31_RS04920 DNA utilization protein GntX insig. 38 88
o Dickeya dadantii 3937 DDA3937_RS19650 DNA utilization protein GntX insig. 41 89
o Burkholderia phytofirmans PsJN BPHYT_RS02625 competence protein ComF sig. 41 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS06780 ComF family protein insig. 42 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01997 comF family protein insig. 39 90
  Shewanella oneidensis MR-1 SO4625 comF competence protein ComF (NCBI ptt file) insig. 36 93
  Magnetospirillum magneticum AMB-1 AMB_RS08105 amidophosphoribosyltransferase insig. 40 89
  Pantoea sp. MT58 IAI47_01785 DNA utilization protein GntX insig. 38 89
  Enterobacter asburiae PDN3 EX28DRAFT_4129 Predicted amidophosphoribosyltransferases insig. 37 89
  Vibrio cholerae E7946 ATCC 55056 CSW01_13720 DNA utilization protein GntX insig. 37 84
  Ralstonia solanacearum GMI1000 RS_RS01770 amidophosphoribosyltransferase insig. 39 96
  Shewanella loihica PV-4 Shew_3629 competence protein ComF (RefSeq) insig. 37 93
  Variovorax sp. OAS795 ABID97_RS23980 ComF family protein insig. 39 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS01480 ComF family protein insig. 42 92
  Klebsiella michiganensis M5al BWI76_RS26625 gluconate transporter periplasmic gluconate-binding protein insig. 37 87
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11920 Phosphoribosyltransferase cofit 37 89
  Erwinia tracheiphila SCR3 LU632_RS22980 phosphoribosyltransferase insig. 37 89
  Klebsiella pneumoniae MKP103 KDGMDA_07020 DNA utilization protein GntX sig. 38 87
  Klebsiella pneumoniae MRSN742743 KFA93_RS10115 gntX;go_process=nucleoside DNA utilization protein GntX insig. 38 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF604 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 35 89
  Xanthobacter sp. DMC5 GFF104 hypothetical protein insig. 37 89
  Variovorax sp. SCN45 GFF2294 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 38 95
  Rhodospirillum rubrum S1H Rru_A0737 Phosphoribosyltransferase (NCBI) cofit 39 91
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS01780 gntX DNA utilization protein GntX insig. 37 89
  Bacteroides ovatus ATCC 8483 BACOVA_02030 comF family protein cofit 30 96
  Azospirillum brasilense Sp245 AZOBR_RS02910 phosphoribosyltransferase insig. 41 89
  Enterobacter sp. TBS_079 MPMX20_04300 Putative ribose-phosphate pyrophosphokinase insig. 38 89
  Escherichia coli ECRC100 OKFHMN_16995 gntX DNA utilization protein GntX cofit 34 89
  Escherichia coli ECRC101 MCAODC_07525 gntX DNA utilization protein GntX insig. 34 89
  Escherichia coli ECRC102 NIAGMN_14765 gntX DNA utilization protein GntX insig. 34 89
  Escherichia coli ECRC98 JDDGAC_20625 gntX DNA utilization protein GntX insig. 34 89
  Escherichia coli ECRC99 KEDOAH_11145 gntX DNA utilization protein GntX no data 34 89
  Bacteroides stercoris CC31F HMPREF1181_RS00975 ComF family protein insig. 31 92
  Escherichia coli BL21 ECD_03265 DNA catabolic protein insig. 34 89
  Escherichia coli ECOR27 NOLOHH_08780 gntX DNA utilization protein GntX insig. 34 89
  Escherichia coli ECRC62 BNILDI_02735 gntX DNA utilization protein GntX cofit 34 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00290 hypothetical protein sig. 34 89
  Escherichia coli BW25113 b3413 yhgH orf, hypothetical protein (VIMSS) insig. 34 89
  Escherichia coli ECOR38 HEPCGN_15805 gntX DNA utilization protein GntX insig. 34 89
  Escherichia coli Nissle 1917 ECOLIN_RS19495 DNA utilization protein GntX insig. 34 89
  Acidovorax sp. GW101-3H11 Ac3H11_3895 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 38 76
  Sphingobium sp. HT1-2 GFF2534 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy cofit 35 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09600 ComF family protein insig. 32 94
  Bacteroides thetaiotaomicron VPI-5482 BT2800 putative amidophosphoribosyl-transferase (NCBI ptt file) insig. 29 96
  Escherichia fergusonii Becca EFB2_00415 Putative ribose-phosphate pyrophosphokinase insig. 33 89
  Desulfovibrio vulgaris Miyazaki F DvMF_2857 phosphoribosyltransferase (RefSeq) insig. 43 85
  Rhizobium sp. OAE497 ABIE40_RS17355 ComF family protein insig. 35 94
  Phocaeicola dorei CL03T12C01 ABI39_RS07080 ComF family protein insig. 32 94
  Desulfovibrio vulgaris Hildenborough JW710 DVU2768 comF family protein (TIGR) insig. 38 73
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19150 amidophosphoribosyltransferase insig. 31 83
  Agrobacterium fabrum C58 Atu3512 competence protein F insig. 34 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3601 Predicted amidophosphoribosyltransferases insig. 36 95
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1053 Predicted amidophosphoribosyltransferases insig. 45 45
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11300 phosphoribosyltransferase family protein insig. 29 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00650 ComF family protein insig. 30 83
  Alteromonas macleodii MIT1002 MIT1002_04017 DNA utilization protein GntX insig. 32 65
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF685 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy insig. 37 95
  Bosea sp. OAE506 ABIE41_RS08035 ComF family protein insig. 34 93
  Castellaniella sp019104865 MT123 ABCV34_RS14240 phosphoribosyltransferase family protein insig. 34 93
  Sinorhizobium meliloti 1021 SMc02444 hypothetical protein insig. 35 90
  Dinoroseobacter shibae DFL-12 Dshi_3500 competence protein F, putative (RefSeq) insig. 34 90
  Acinetobacter baumannii LAC-4 RR41_RS02070 ComF family protein insig. 27 77
  Caulobacter crescentus NA1000 CCNA_00873 amidophosphoribosyltransferase family protein sig. 47 38
  Caulobacter crescentus NA1000 Δfur CCNA_00873 amidophosphoribosyltransferase family protein cofit 47 38
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13555 ComF family protein insig. 41 48
  Rhodopseudomonas palustris CGA009 TX73_003090 ComF family protein insig. 35 89
  Acinetobacter radioresistens SK82 MPMX26_02733 hypothetical protein insig. 30 86
  Synechococcus elongatus PCC 7942 Synpcc7942_2404 hypothetical protein insig. 35 76
  Synechocystis sp000284455 PCC 6803 SGL_RS13010 ComF family protein insig. 28 93
  Phaeobacter inhibens DSM 17395 PGA1_c34720 phosphoribosyl transferase-like protein sig. 30 89
  Fusobacterium nucleatum SB010 HUW76_08555 ComF family protein strong 26 82
  Cellulophaga baltica 18 M666_RS03640 phosphoribosyltransferase family protein cofit 26 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17250 competence protein strong 43 36
  Bifidobacterium breve UCC2003 BBR_RS14225 ComF family protein insig. 29 56
  Acinetobacter baumannii LAC-4 RR41_RS09530 RecQ family ATP-dependent DNA helicase insig. 33 44