Homologs of GFF3765 from Xanthobacter sp. DMC5

hypothetical protein
SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF3765 hypothetical protein insig. 100 100
o Bosea sp. OAE506 ABIE41_RS04835 RNA pseudouridine synthase insig. 55 81
o Azospirillum sp. SherDot2 MPMX19_03163 hypothetical protein insig. 54 83
o Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 53 82
o Azospirillum brasilense Sp245 AZOBR_RS08300 pseudouridine synthase insig. 54 84
  Magnetospirillum magneticum AMB-1 AMB_RS19265 RNA pseudouridine synthase cofit 46 85
  Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 44 84
  Azospirillum sp. SherDot2 MPMX19_05341 hypothetical protein insig. 43 91
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 43 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 43 84
  Azospirillum brasilense Sp245 AZOBR_RS06905 pseudouridine synthase strong 43 83
  Rhodopseudomonas palustris CGA009 TX73_001090 RNA pseudouridine synthase insig. 57 53
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 40 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3705 Pseudouridylate synthases, 23S RNA-specific insig. 44 80
  Azospirillum brasilense Sp245 AZOBR_RS31090 pseudouridine synthase insig. 43 83
  Xanthobacter sp. DMC5 GFF1347 Ribosomal large subunit pseudouridine synthase C insig. 41 83
  Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 36 91
  Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 38 84
  Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 40 87
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 39 83
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 39 83
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 40 83
  Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 36 83
  Magnetospirillum magneticum AMB-1 AMB_RS15620 RluA family pseudouridine synthase cofit 42 83
  Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 40 83
  Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 39 90
  Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 39 90
  Dinoroseobacter shibae DFL-12 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) insig. 37 84
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07880 RluA family pseudouridine synthase insig. 36 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 36 67
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 39 75
  Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 32 83
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 38 72
  Pseudomonas simiae WCS417 PS417_21480 23S rRNA pseudouridylate synthase strong 35 84
  Pseudomonas fluorescens SBW25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 35 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 35 84
  Pseudomonas sp. S08-1 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase cofit 33 83
  Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 37 76
  Pseudomonas stutzeri RCH2 Psest_1680 pseudouridine synthase, RluA family no data 34 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 35 95
  Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 34 83
  Pseudomonas syringae pv. syringae B728a Psyr_1639 ribosomal large subunit pseudouridine synthase C sig. 34 83
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1639 ribosomal large subunit pseudouridine synthase C insig. 34 83
  Pseudomonas fluorescens FW300-N2E3 AO353_01405 23S rRNA pseudouridylate synthase strong 34 83
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 38 77
  Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 31 83
  Pseudomonas sp. DMC3 GFF4765 Ribosomal large subunit pseudouridine synthase C cofit 35 83
  Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 35 87
  Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 34 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) no data 34 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15205 RNA pseudouridine synthase strong 35 70
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 36 73
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 36 72
  Pseudomonas putida KT2440 PP_1906 ribosomal large subunit pseudouridine synthase C strong 34 83
  Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 36 87
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20600 RNA pseudouridine synthase sig. 35 80
  Methylophilus sp. DMC18 GFF1213 Ribosomal large subunit pseudouridine synthase D insig. 37 68
  Pseudomonas sp. SVBP6 COO64_RS05845 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 83
  Pseudomonas fluorescens FW300-N2C3 AO356_20125 23S rRNA pseudouridylate synthase strong 34 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 34 83
  Pseudomonas sp. BP01 JOY50_RS16830 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 32 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 34 83
  Pseudomonas syringae pv. syringae B728a Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 31 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0726 ribosomal large subunit pseudouridine synthase D strong 31 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10060 RluA family pseudouridine synthase insig. 39 67
  Dinoroseobacter shibae DFL-12 Dshi_3106 pseudouridine synthase (RefSeq) insig. 38 78
  Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 34 83
  Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 32 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase insig. 31 90
  Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 31 89
  Bosea sp. OAE506 ABIE41_RS05635 RluA family pseudouridine synthase sig. 36 73
  Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 34 86
  Pseudomonas putida KT2440 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase no data 31 85
  Agrobacterium fabrum C58 Atu4041 ribosomal large subunit pseudouridine synthase A sig. 38 73
  Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 31 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 31 85
  Pseudomonas aeruginosa PA14 IKLFDK_00810 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 32 85
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 33 85
  Synechococcus elongatus PCC 7942 Synpcc7942_1112 ribosomal large subunit pseudouridine synthase D strong 33 83
  Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 35 75
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 35 75
  Pantoea sp. MT58 IAI47_16060 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 35 73
  Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 32 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14415 pseudouridine synthase strong 30 75
  Pseudomonas simiae WCS417 PS417_03820 ribosomal large subunit pseudouridine synthase D no data 30 85
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 37 73
  Erwinia tracheiphila SCR3 LU632_RS02800 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 37 73
  Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 36 68
  Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 34 73
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12640 RluA family pseudouridine synthase strong 33 69
  Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 32 86
  Pseudomonas fluorescens FW300-N2E3 AO353_14220 ribosomal large subunit pseudouridine synthase D strong 30 85
  Pseudomonas fluorescens SBW25 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 30 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 30 84
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 35 75
  Pseudomonas sp. RS175 PFR28_03154 Dual-specificity RNA pseudouridine synthase RluA insig. 34 72
  Pseudomonas sp. DMC3 GFF2599 Dual-specificity RNA pseudouridine synthase RluA insig. 34 72
  Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 83