Homologs of GFF2093 from Sphingobium sp. HT1-2

RNA polymerase sigma factor RpoD
SEED: RNA polymerase sigma factor RpoD
KEGG: RNA polymerase primary sigma factor

Top 250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2093 RNA polymerase sigma factor RpoD no data 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_4238 RNA polymerase sigma factor RpoD, C-terminal domain no data 84 98
o Rhizobium sp. OAE497 ABIE40_RS12720 RNA polymerase sigma factor RpoD no data 64 97
o Agrobacterium fabrum C58 Atu2167 RNA polymerase sigma factor RpoD no data 62 100
o Rhodospirillum rubrum S1H Rru_A2882 Sigma 70 (RpoD) (NCBI) no data 61 100
o Sinorhizobium meliloti 1021 SMc01563 RNA polymerase sigma factor RpoD no data 62 97
o Dinoroseobacter shibae DFL-12 Dshi_2261 RNA polymerase, sigma 70 subunit, RpoD family (RefSeq) no data 63 97
o Azospirillum brasilense Sp245 AZOBR_RS10905 RNA polymerase sigma factor RpoD no data 63 100
o Azospirillum sp. SherDot2 MPMX19_00761 RNA polymerase sigma factor RpoD no data 62 100
o Magnetospirillum magneticum AMB-1 AMB_RS03585 RNA polymerase sigma factor RpoD no data 61 100
o Rhodopseudomonas palustris CGA009 TX73_006610 RNA polymerase sigma factor RpoD no data 60 98
o Xanthobacter sp. DMC5 GFF3244 RNA polymerase sigma factor RpoD no data 61 97
o Bosea sp. OAE506 ABIE41_RS11995 RNA polymerase sigma factor RpoD no data 59 97
o Phaeobacter inhibens DSM 17395 PGA1_c08800 RNA polymerase sigma factor RpoD no data 62 97
o Caulobacter crescentus NA1000 CCNA_03142 RNA polymerase sigma factor rpoD no data 60 97
o Caulobacter crescentus NA1000 Δfur CCNA_03142 RNA polymerase sigma factor rpoD no data 60 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10595 RNA polymerase sigma factor RpoD no data 60 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS15185 RNA polymerase sigma factor RpoD strong 48 96
o Serratia liquefaciens MT49 IAI46_22125 RNA polymerase sigma factor RpoD no data 47 96
o Pantoea sp. MT58 IAI47_03050 RNA polymerase sigma factor RpoD no data 46 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11870 RNA polymerase sigma factor RpoD no data 47 96
o Cupriavidus basilensis FW507-4G11 RR42_RS14965 hypothetical protein strong 46 97
o Erwinia amylovora T8 OLJFJH_07585 RNA polymerase sigma factor RpoD no data 47 96
o Burkholderia phytofirmans PsJN BPHYT_RS33535 RNA polymerase sigma factor RpoD strong 48 96
o Dickeya dianthicola 67-19 HGI48_RS03110 RNA polymerase sigma factor RpoD no data 47 96
o Dickeya dianthicola ME23 DZA65_RS03105 RNA polymerase sigma factor RpoD no data 47 96
o Enterobacter asburiae PDN3 EX28DRAFT_3102 RNA polymerase, sigma 70 subunit, RpoD no data 48 96
o Pectobacterium carotovorum WPP14 HER17_RS18415 RNA polymerase sigma factor RpoD no data 47 96
o Dickeya dadantii 3937 DDA3937_RS02945 RNA polymerase sigma factor RpoD no data 46 96
  Ralstonia solanacearum GMI1000 RS_RS11120 RNA polymerase sigma factor RpoD no data 47 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06008 RNA polymerase, sigma 70 subunit, RpoD strong 47 96
o Paraburkholderia graminis OAS925 ABIE53_004866 RNA polymerase primary sigma factor strong 48 96
o Pseudomonas syringae pv. syringae B728a Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 47 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 47 96
o Castellaniella sp019104865 MT123 ABCV34_RS02695 RNA polymerase sigma factor RpoD no data 46 96
o Shewanella loihica PV-4 Shew_0996 RpoD family RNA polymerase sigma factor (RefSeq) no data 47 96
  Herbaspirillum seropedicae SmR1 HSERO_RS04365 RNA polymerase sigma factor RpoD no data 46 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13945 RNA polymerase sigma factor RpoD no data 46 96
o Pseudomonas stutzeri RCH2 Psest_3682 RNA polymerase sigma factor, sigma-70 family no data 47 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3822 RNA polymerase sigma factor RpoD no data 45 96
  Variovorax sp. OAS795 ABID97_RS10535 RNA polymerase sigma factor RpoD no data 45 96
  Variovorax sp. SCN45 GFF2879 RNA polymerase sigma factor RpoD no data 44 96
  Acidovorax sp. GW101-3H11 Ac3H11_194 RNA polymerase sigma factor RpoD no data 45 96
  Cupriavidus basilensis FW507-4G11 RR42_RS10750 DNA-directed RNA polymerase sigma-70 factor no data 43 95
  Burkholderia phytofirmans PsJN BPHYT_RS32590 RNA polymerase sigma factor RpoD no data 41 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03902 RNA polymerase, sigma 70 subunit, RpoD strong 42 96
  Paraburkholderia graminis OAS925 ABIE53_004960 RNA polymerase primary sigma factor strong 41 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03675 RNA polymerase sigma factor RpoD no data 56 62
  Ralstonia solanacearum UW163 UW163_RS09995 RNA polymerase sigma factor RpoD no data 56 62
  Alteromonas macleodii MIT1002 MIT1002_00733 Sigma-70 no data 69 47
  Pseudomonas orientalis W4I3 QF045_RS00280 RNA polymerase sigma factor RpoD no data 60 57
  Ralstonia sp. UNC404CL21Col ABZR87_RS15600 RNA polymerase sigma factor RpoD no data 56 62
  Rahnella sp. WP5 EX31_RS08195 RNA polymerase sigma factor RpoD no data 57 60
  Escherichia coli BL21 ECD_02937 RNA polymerase, sigma 70 (sigma D) factor no data 63 51
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00635 RNA polymerase sigma factor RpoD no data 63 51
  Escherichia fergusonii Becca EFB2_00744 RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECOR27 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECOR38 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECRC100 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECRC101 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECRC102 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECRC62 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECRC98 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli ECRC99 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD no data 63 51
  Pseudomonas simiae WCS417 PS417_25880 RNA polymerase subunit sigma-70 no data 59 57
  Ralstonia solanacearum PSI07 RPSI07_RS13555 RNA polymerase sigma factor RpoD no data 55 62
  Vibrio cholerae E7946 ATCC 55056 CSW01_02745 RNA polymerase sigma factor RpoD no data 68 48
  Pseudomonas sp. RS175 PFR28_04078 RNA polymerase sigma factor RpoD no data 59 57
  Klebsiella michiganensis M5al BWI76_RS24555 RNA polymerase sigma factor RpoD no data 63 51
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3177 RNA polymerase sigma factor RpoD no data 63 51
  Escherichia coli BW25113 b3067 rpoD RNA polymerase sigma factor (NCBI) no data 63 51
  Pseudomonas fluorescens SBW25 PFLU_RS27535 RNA polymerase sigma factor RpoD no data 59 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27535 RNA polymerase sigma factor RpoD no data 59 57
  Klebsiella pneumoniae MRSN742743 KFA93_RS12625 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 63 51
  Klebsiella pneumoniae MKP103 KDGMDA_05365 RNA polymerase sigma factor RpoD no data 63 51
  Pseudomonas fluorescens FW300-N2C3 AO356_14265 RNA polymerase subunit sigma-70 no data 59 57
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4791 RNA polymerase sigma factor RpoD no data 59 57
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05296 RNA polymerase sigma factor RpoD no data 59 57
  Pseudomonas fluorescens FW300-N2E3 AO353_07385 RNA polymerase subunit sigma-70 no data 59 57
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14330 rpoD RNA polymerase sigma factor RpoD no data 58 57
  Erwinia tracheiphila SCR3 LU632_RS20725 rpoD RNA polymerase sigma factor RpoD no data 58 57
  Enterobacter sp. TBS_079 MPMX20_03909 RNA polymerase sigma factor RpoD no data 63 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2513 RNA polymerase sigma factor RpoD no data 63 52
  Dechlorosoma suillum PS Dsui_1209 RNA polymerase sigma factor, sigma-70 family no data 55 60
  Pseudomonas putida KT2440 PP_0387 RNA polymerase, sigma 70 (sigma D) factor no data 57 60
  Marinobacter adhaerens HP15 HP15_315 RNA polymerase, sigma 70 subunit, RpoD no data 68 47
  Pseudomonas sp. SVBP6 COO64_RS22580 rpoD RNA polymerase sigma factor RpoD no data 62 52
  Pseudomonas sp. DMC3 GFF51 RNA polymerase sigma factor RpoD no data 63 52
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1186 RNA polymerase sigma factor RpoD no data 63 52
  Pseudomonas sp. BP01 JOY50_RS18070 rpoD RNA polymerase sigma factor RpoD no data 63 52
  Shewanella amazonensis SB2B Sama_0823 RNA polymerase sigma-70 factor (RefSeq) no data 67 48
  Shewanella oneidensis MR-1 SO1284 rpoD RNA polymerase sigma-70 factor (NCBI ptt file) no data 67 48
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4729.1 RNA polymerase sigma factor RpoD no data 59 57
  Pseudomonas segetis P6 ACVTMO_RS04280 rpoD RNA polymerase sigma factor RpoD no data 59 57
  Methylophilus sp. DMC18 GFF2349 RNA polymerase sigma factor RpoD no data 58 54
  Shewanella sp. ANA-3 Shewana3_3087 RNA polymerase, sigma 70 subunit, RpoD (RefSeq) no data 66 48
  Pseudomonas aeruginosa MRSN321 DY961_RS22905 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 67 47
  Pseudomonas aeruginosa PA14 IKLFDK_22530 RNA polymerase sigma factor RpoD no data 67 47
  Pseudomonas aeruginosa PUPa3 DQ20_RS36440 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 67 47
  Kangiella aquimarina DSM 16071 B158DRAFT_0818 RNA polymerase sigma factor, sigma-70 family no data 67 47
  Pseudomonas sp. S08-1 OH686_14970 RNA polymerase sigma factor RpoD no data 68 47
  Lysobacter sp. OAE881 ABIE51_RS02310 RNA polymerase sigma factor RpoD no data 61 55
  Rhodanobacter sp. FW510-T8 OKGIIK_13865 rpoD RNA polymerase sigma factor RpoD no data 67 47
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01085 RNA polymerase sigma factor RpoD no data 67 47
  Rhodanobacter denitrificans MT42 LRK55_RS07055 RNA polymerase sigma factor RpoD no data 67 47
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07325 RNA polymerase sigma factor RpoD no data 67 47
  Acinetobacter baumannii LAC-4 RR41_RS03995 RNA polymerase sigma factor RpoD no data 60 54
  Acinetobacter radioresistens SK82 MPMX26_00713 RNA polymerase sigma factor RpoD no data 65 48
  Desulfovibrio vulgaris Miyazaki F DvMF_0494 RNA polymerase, sigma 70 subunit, RpoD subfamily (RefSeq) no data 71 38
  Desulfovibrio vulgaris Hildenborough JW710 DVU1788 rpoD RNA polymerase sigma-70 factor (TIGR) no data 69 39
  Paraburkholderia sabiae LMG 24235 QEN71_RS13555 RNA polymerase sigma factor RpoD no data 51 54
  Fusobacterium nucleatum SB010 HUW76_03650 RNA polymerase sigma factor RpoD no data 59 40
  Bifidobacterium breve UCC2003 BBR_RS16480 RNA polymerase sigma factor no data 59 36
  Mycobacterium tuberculosis H37Rv Rv2703 RNA polymerase sigma factor SigA (sigma-A) no data 56 38
  Synechococcus elongatus PCC 7942 Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD no data 59 35
  Synechocystis sp000284455 PCC 6803 SGL_RS17245 RNA polymerase sigma factor RpoD no data 59 35
  Mycobacterium tuberculosis H37Rv Rv2710 RNA polymerase sigma factor SigB no data 49 35
  Shewanella amazonensis SB2B Sama_0276 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein (RefSeq) insig. 42 52
  Synechococcus elongatus PCC 7942 Synpcc7942_1849 sigC RNA polymerase sigma factor SigC strong 44 40
  Synechococcus elongatus PCC 7942 Synpcc7942_1557 rpoD6 principal RNA polymerase sigma factor SigA strong 48 35
  Synechococcus elongatus PCC 7942 Synpcc7942_1746 rpoD2 group2 RNA polymerase sigma factor SigB strong 44 38
  Synechocystis sp000284455 PCC 6803 SGL_RS07740 RNA polymerase sigma factor, RpoD/SigA family strong 46 38
  Synechocystis sp000284455 PCC 6803 SGL_RS12540 RNA polymerase sigma factor, RpoD/SigA family strong 45 37
  Synechocystis sp000284455 PCC 6803 SGL_RS14610 RNA polymerase sigma factor SigC cofit 45 37
  Synechococcus elongatus PCC 7942 Synpcc7942_0569 rpoD4 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like strong 47 35
  Synechocystis sp000284455 PCC 6803 SGL_RS07975 RNA polymerase sigma factor, RpoD/SigA family strong 46 35
  Shewanella loihica PV-4 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) insig. 45 33
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16420 RNA polymerase sigma factor RpoD/SigA no data 41 37
  Cellulophaga baltica 18 M666_RS08520 sigma-70 family RNA polymerase sigma factor no data 41 37
  Synechococcus elongatus PCC 7942 Synpcc7942_0672 rpoD3 RNA polymerase sigma factor SigD sig. 42 38
  Vibrio cholerae E7946 ATCC 55056 CSW01_02835 RNA polymerase sigma factor RpoS cofit 41 40
  Alteromonas macleodii MIT1002 MIT1002_00625 RNA polymerase sigma factor RpoS strong 45 33
  Bacteroides ovatus ATCC 8483 BACOVA_00615 Sigma-70 region 2 no data 40 37
  Bacteroides stercoris CC31F HMPREF1181_RS10780 RNA polymerase sigma factor RpoD/SigA no data 40 37
  Bacteroides thetaiotaomicron VPI-5482 BT1311 RNA polymerase sigma factor rpoD (Sigma-A) (NCBI ptt file) no data 40 37
  Pseudomonas aeruginosa MRSN321 DY961_RS14865 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 40 39
  Pseudomonas aeruginosa PA14 IKLFDK_18495 RNA polymerase sigma factor RpoS strong 40 39
  Pseudomonas aeruginosa PUPa3 DQ20_RS42260 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 40 39
  Dickeya dadantii 3937 DDA3937_RS16875 RNA polymerase sigma factor RpoS no data 43 33
  Dickeya dianthicola 67-19 HGI48_RS16945 RNA polymerase sigma factor RpoS insig. 43 33
  Dickeya dianthicola ME23 DZA65_RS18020 RNA polymerase sigma factor RpoS sig. 43 33
  Phocaeicola dorei CL03T12C01 ABI39_RS13985 RNA polymerase sigma factor RpoD/SigA no data 40 37
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17770 RNA polymerase sigma factor RpoD/SigA no data 40 37
  Erwinia amylovora T8 OLJFJH_09380 RNA polymerase sigma factor RpoS sig. 43 33
  Serratia liquefaciens MT49 IAI46_03790 RNA polymerase sigma factor RpoS strong 43 33
  Klebsiella pneumoniae MKP103 KDGMDA_03220 RNA polymerase sigma factor RpoS strong 43 33
  Klebsiella pneumoniae MRSN742743 KFA93_RS18590 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 43 33
  Enterobacter asburiae PDN3 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS strong 43 33
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4788 RNA polymerase sigma factor RpoS strong 43 33
  Pantoea sp. MT58 IAI47_04235 RNA polymerase sigma factor RpoS strong 43 33
  Pectobacterium carotovorum WPP14 HER17_RS04350 RNA polymerase sigma factor RpoS strong 43 33
  Rahnella sp. WP5 EX31_RS07825 RNA polymerase sigma factor RpoS strong 43 33
  Pseudomonas sp. S08-1 OH686_18185 RNA polymerase sigma factor RpoS cofit 40 39
  Enterobacter sp. TBS_079 MPMX20_03627 RNA polymerase sigma factor RpoS strong 43 33
  Escherichia coli BL21 ECD_02591 RNA polymerase, sigma S (sigma 38) factor cofit 43 33
  Escherichia fergusonii Becca EFB2_01169 RNA polymerase sigma factor RpoS cofit 43 33
  Escherichia coli ECOR27 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS strong 43 33
  Escherichia coli ECOR38 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS strong 43 33
  Escherichia coli ECRC101 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS strong 43 33
  Escherichia coli ECRC102 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS strong 43 33
  Escherichia coli ECRC62 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS strong 43 33
  Escherichia coli ECRC98 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS strong 43 33
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00992 RNA polymerase sigma factor RpoS insig. 43 33
  Escherichia coli BW25113 b2741 rpoS RNA polymerase sigma factor (NCBI) strong 43 33
  Shewanella amazonensis SB2B Sama_1044 RNA polymerase sigma-38 factor (RefSeq) sig. 43 34
  Escherichia coli ECRC100 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS cofit 43 33
  Pseudomonas stutzeri RCH2 Psest_2806 RNA polymerase sigma factor RpoS strong 39 39
  Marinobacter adhaerens HP15 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family strong 41 38
  Klebsiella michiganensis M5al BWI76_RS22645 RNA polymerase sigma factor RpoS strong 41 34
  Pseudomonas segetis P6 ACVTMO_RS16960 rpoS RNA polymerase sigma factor RpoS strong 39 39
  Escherichia coli ECRC99 KEDOAH_07640 rpoS RNA polymerase sigma factor RpoS no data 43 33
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3437 RNA polymerase sigma factor, sigma-70 family no data 41 35
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17500 rpoS RNA polymerase sigma factor RpoS strong 42 33
  Erwinia tracheiphila SCR3 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS strong 42 33
  Cellulophaga baltica 18 M666_RS16995 RNA polymerase sigma factor RpoD/SigA strong 40 37
  Pseudomonas sp. BP01 JOY50_RS23755 rpoS RNA polymerase sigma factor RpoS insig. 38 39
  Pseudomonas putida KT2440 PP_1623 RNA polymerase, sigma S (sigma 38) factor strong 38 39
  Shewanella oneidensis MR-1 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) sig. 43 33
  Pseudomonas fluorescens SBW25 PFLU_RS06430 RNA polymerase sigma factor RpoS cofit 38 39
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06430 RNA polymerase sigma factor RpoS strong 38 39
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01443 RNA polymerase sigma factor RpoS cofit 38 39
  Shewanella sp. ANA-3 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) sig. 43 33
  Pseudomonas orientalis W4I3 QF045_RS09210 RNA polymerase sigma factor RpoS insig. 38 39
  Pseudomonas simiae WCS417 PS417_06365 RNA polymerase sigma factor strong 38 39
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4674 RNA polymerase sigma factor RpoS strong 38 39
  Pseudomonas sp. RS175 PFR28_00427 RNA polymerase sigma factor RpoS strong 38 39
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04885 RNA polymerase subunit sigma no data 39 37
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3115 RNA polymerase sigma factor RpoS strong 38 39
  Pseudomonas sp. DMC3 GFF2084 RNA polymerase sigma factor RpoS strong 38 39
  Pseudomonas sp. SVBP6 COO64_RS19795 rpoS RNA polymerase sigma factor RpoS insig. 38 39
  Pseudomonas fluorescens FW300-N2E3 AO353_16615 RNA polymerase sigma factor RpoS strong 38 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3037 RNA polymerase sigma factor RpoS strong 38 39
  Pseudomonas fluorescens FW300-N2C3 AO356_05885 RNA polymerase sigma factor RpoS strong 38 39
  Pseudomonas syringae pv. syringae B728a Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS sig. 38 39
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS cofit 38 39
  Herbaspirillum seropedicae SmR1 HSERO_RS14830 RNA polymerase sigma factor RpoS insig. 42 34
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA no data 39 37
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04285 RNA polymerase sigma factor RpoD no data 39 35
  Ralstonia solanacearum GMI1000 RS_RS06045 RNA polymerase sigma factor RpoS strong 39 40
  Ralstonia solanacearum PSI07 RPSI07_RS18140 RNA polymerase sigma factor RpoS strong 38 40
  Ralstonia sp. UNC404CL21Col ABZR87_RS10875 RNA polymerase sigma factor RpoS strong 39 40
  Cupriavidus basilensis FW507-4G11 RR42_RS13185 RNA polymerase sigma factor RpoS strong 38 40
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15235 RNA polymerase sigma factor RpoS strong 42 34
  Ralstonia solanacearum UW163 UW163_RS12700 RNA polymerase sigma factor RpoS sig. 42 34
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16485 RNA polymerase sigma factor RpoD/SigA insig. 35 40
  Dechlorosoma suillum PS Dsui_1971 RNA polymerase sigma factor RpoS cofit 40 33
  Cellulophaga baltica 18 M666_RS16155 RNA polymerase sigma factor RpoD/SigA insig. 37 35
  Paraburkholderia sabiae LMG 24235 QEN71_RS22240 RNA polymerase sigma factor RpoS cofit 39 38
  Burkholderia phytofirmans PsJN BPHYT_RS09115 RNA polymerase sigma factor RpoS sig. 39 38
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS no data 39 38
  Paraburkholderia graminis OAS925 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor strong 39 38
  Ralstonia solanacearum PSI07 RPSI07_RS07910 RNA polymerase sigma factor insig. 41 35
  Rhodanobacter denitrificans MT42 LRK55_RS09025 sigma-70 family RNA polymerase sigma factor insig. 45 28
  Variovorax sp. OAS795 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor insig. 38 33
  Variovorax sp. SCN45 GFF2842 RNA polymerase sigma factor RpoS insig. 38 33
  Marinobacter adhaerens HP15 HP15_3857 RNA polymerase, sigma 70 subunit, RpoD family insig. 29 38
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2597 RNA polymerase sigma factor, sigma-70 family insig. 36 35
  Desulfovibrio vulgaris Hildenborough JW710 DVU1584 rpoH sigma 70 family protein (TIGR) no data 35 33
  Desulfovibrio vulgaris Miyazaki F DvMF_0477 putative RNA polymerase, sigma 70 family subunit (RefSeq) no data 34 33
  Azospirillum brasilense Sp245 AZOBR_RS00930 RNA polymerase sigma 70 insig. 32 33
  Azospirillum sp. SherDot2 MPMX19_01046 RNA polymerase sigma factor RpoH insig. 34 33
  Azospirillum brasilense Sp245 AZOBR_RS08905 RNA polymerase sigma 70 sig. 32 33
  Desulfovibrio vulgaris Hildenborough JW710 DVU1788 rpoD RNA polymerase sigma-70 factor (TIGR) no data 36 24
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03735 RNA polymerase sigma factor RpoH no data 31 33
  Rhodospirillum rubrum S1H Rru_A1021 Sigma 32 (RpoH) (NCBI) strong 33 34
  Paraburkholderia sabiae LMG 24235 QEN71_RS01625 RNA polymerase sigma factor RpoH no data 33 33
  Azospirillum sp. SherDot2 MPMX19_05441 RNA polymerase sigma factor RpoH no data 31 33
  Herbaspirillum seropedicae SmR1 HSERO_RS20735 RNA polymerase sigma 70 no data 35 33
  Azospirillum brasilense Sp245 AZOBR_RS21830 RNA polymerase sigma 70 insig. 32 35
  Ralstonia solanacearum PSI07 RPSI07_RS22305 RNA polymerase sigma factor RpoH no data 32 33
  Pseudomonas fluorescens FW300-N2C3 AO356_14265 RNA polymerase subunit sigma-70 no data 37 24
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4791 RNA polymerase sigma factor RpoD no data 37 24
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11000 RNA polymerase sigma factor RpoH no data 32 33
  Ralstonia solanacearum UW163 UW163_RS02580 RNA polymerase sigma factor RpoH no data 32 33
  Azospirillum sp. SherDot2 MPMX19_02324 RNA polymerase sigma factor RpoH insig. 31 33
  Magnetospirillum magneticum AMB-1 AMB_RS14115 RNA polymerase sigma factor RpoH no data 34 33
  Cupriavidus basilensis FW507-4G11 RR42_RS01930 RNA polymerase factor sigma-32 no data 34 33
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0665 alternative sigma factor RpoH no data 31 33
  Ralstonia solanacearum GMI1000 RS_RS01840 RNA polymerase sigma factor RpoH no data 32 33
  Azospirillum sp. SherDot2 MPMX19_05595 RNA polymerase sigma factor RpoH insig. 31 34
  Azospirillum brasilense Sp245 AZOBR_RS21510 RNA polymerase sigma 70 insig. 31 34
  Azospirillum brasilense Sp245 AZOBR_RS10665 RNA polymerase sigma 70 strong 30 34
  Castellaniella sp019104865 MT123 ABCV34_RS13215 RNA polymerase sigma factor RpoH no data 30 33
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01975 RNA polymerase, sigma 32 subunit, RpoH no data 33 33
  Paraburkholderia graminis OAS925 ABIE53_000694 RNA polymerase sigma-32 factor no data 33 33
  Ralstonia sp. UNC404CL21Col ABZR87_RS06855 RNA polymerase sigma factor RpoH sig. 32 33
  Sinorhizobium meliloti 1021 SMc03873 RNA polymerase factor sigma-32 insig. 33 33
  Methylophilus sp. DMC18 GFF1926 RNA polymerase sigma factor RpoH no data 33 36
  Rhodospirillum rubrum S1H Rru_A1110 Sigma 32 (RpoH) (NCBI) sig. 29 33
  Dechlorosoma suillum PS Dsui_1121 alternative sigma factor RpoH no data 31 33