Homologs of GFF108 from Xanthobacter sp. DMC5

hypothetical protein
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase B

Top 250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF108 hypothetical protein insig. 100 100
  Rhodopseudomonas palustris CGA009 TX73_005980 pseudouridine synthase insig. 71 41
  Agrobacterium fabrum C58 Atu0689 ribosomal large subunit pseudouridine synthase B strong 63 42
  Sinorhizobium meliloti 1021 SMc00904 hypothetical protein sig. 67 39
  Rhizobium sp. OAE497 ABIE40_RS03760 pseudouridine synthase sig. 66 40
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 65 38
  Caulobacter crescentus NA1000 CCNA_00230 ribosomal large subunit pseudouridine synthase B sig. 62 37
  Caulobacter crescentus NA1000 Δfur CCNA_00230 ribosomal large subunit pseudouridine synthase B cofit 62 37
  Azospirillum sp. SherDot2 MPMX19_01627 hypothetical protein insig. 64 39
  Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 62 38
  Rhodospirillum rubrum S1H Rru_A0652 Pseudouridine synthase, Rsu (NCBI) cofit 60 38
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04200 pseudouridine synthase insig. 53 42
  Phaeobacter inhibens DSM 17395 PGA1_c22020 putative ribosomal large subunit pseudouridine synthase B insig. 55 42
  Azospirillum brasilense Sp245 AZOBR_RS04495 ribosomal large subunit pseudouridine synthase B strong 65 37
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0245 pseudouridine synthase insig. 49 46
  Sphingobium sp. HT1-2 GFF1634 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) cofit 55 37
  Kangiella aquimarina DSM 16071 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) strong 45 34
  Dechlorosoma suillum PS Dsui_2725 pseudouridine synthase family protein no data 45 36
  Paraburkholderia graminis OAS925 ABIE53_001827 23S rRNA pseudouridine2605 synthase no data 39 40
  Burkholderia phytofirmans PsJN BPHYT_RS08050 pseudouridine synthase no data 39 40
  Paraburkholderia sabiae LMG 24235 QEN71_RS23115 pseudouridine synthase no data 41 37
  Rahnella sp. WP5 EX31_RS09940 23S rRNA pseudouridine(2605) synthase RluB cofit 43 36
  Cupriavidus basilensis FW507-4G11 RR42_RS12860 pseudouridine synthase strong 42 36
  Pectobacterium carotovorum WPP14 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB strong 41 46
  Herbaspirillum seropedicae SmR1 HSERO_RS18010 pseudouridine synthase strong 40 39
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05101 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) no data 40 38
  Ralstonia solanacearum PSI07 RPSI07_RS17690 23S rRNA pseudouridylate synthase B strong 38 41
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4868 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) cofit 41 46
  Pseudomonas segetis P6 ACVTMO_RS14420 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 40 37
  Pseudomonas aeruginosa MRSN321 DY961_RS01040 rluB;go_function=RNA 23S rRNA pseudouridine(2605) synthase RluB strong 37 55
  Pseudomonas aeruginosa PA14 IKLFDK_16155 23S rRNA pseudouridine(2605) synthase RluB strong 37 55
  Pseudomonas aeruginosa PUPa3 DQ20_RS34495 rluB;go_function=RNA 23S rRNA pseudouridine(2605) synthase RluB strong 37 55
  Marinobacter adhaerens HP15 HP15_1530 RNA-binding S4 domain protein sig. 42 36
  Ralstonia solanacearum GMI1000 RS_RS06445 23S rRNA pseudouridylate synthase B strong 40 38
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15665 rRNA pseudouridine synthase no data 37 42
  Ralstonia solanacearum UW163 UW163_RS13125 rRNA pseudouridine synthase no data 37 42
  Dickeya dianthicola 67-19 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB sig. 46 34
  Dickeya dianthicola ME23 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB sig. 46 34
  Pseudomonas sp. S08-1 OH686_20820 LSU rRNA pseudouridine(2605) synthase cofit 40 38
  Serratia liquefaciens MT49 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB insig. 45 36
  Dickeya dadantii 3937 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB strong 46 34
  Castellaniella sp019104865 MT123 ABCV34_RS02110 23S rRNA pseudouridine(2605) synthase RluB no data 46 34
  Escherichia coli ECOR27 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 44 37
  Escherichia coli ECRC100 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 44 37
  Escherichia coli ECRC101 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 44 37
  Escherichia coli ECRC102 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 44 37
  Escherichia coli ECRC62 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 44 37
  Escherichia coli ECRC98 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 44 37
  Escherichia coli ECRC99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB no data 44 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) sig. 46 34
  Escherichia coli BL21 ECD_01245 23S rRNA pseudouridine(2605) synthase strong 44 37
  Escherichia coli ECOR38 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 44 37
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B strong 44 37
  Escherichia coli BW25113 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) strong 44 37
  Escherichia fergusonii Becca EFB2_02658 Ribosomal large subunit pseudouridine synthase B insig. 44 37
  Escherichia coli Nissle 1917 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB insig. 44 37
  Alteromonas macleodii MIT1002 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B cofit 42 36
  Enterobacter sp. TBS_079 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B sig. 43 37
  Ralstonia sp. UNC404CL21Col ABZR87_RS11195 pseudouridine synthase strong 37 41
  Enterobacter asburiae PDN3 EX28DRAFT_0940 pseudouridine synthase cofit 43 37
  Pseudomonas sp. DMC3 GFF2404 hypothetical protein insig. 39 37
  Pseudomonas fluorescens FW300-N2E3 AO353_18540 pseudouridine synthase strong 39 37
  Klebsiella pneumoniae MKP103 KDGMDA_19590 23S rRNA pseudouridine(2605) synthase RluB sig. 43 37
  Klebsiella pneumoniae MRSN742743 KFA93_RS20075 rluB;go_function=RNA 23S rRNA pseudouridine(2605) synthase RluB sig. 43 37
  Pseudomonas fluorescens FW300-N2C3 AO356_18515 pseudouridine synthase insig. 39 38
  Pseudomonas protegens RBAN4 FABNJH_08325 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 39 37
  Klebsiella michiganensis M5al BWI76_RS11880 23S rRNA pseudouridylate synthase B strong 43 37
  Pseudomonas stutzeri RCH2 Psest_1999 pseudouridine synthase insig. 40 37
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3555 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 39 36
  Pseudomonas sp. RS175 PFR28_03314 hypothetical protein no data 39 38
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5629 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 38 38
  Shewanella amazonensis SB2B Sama_2124 pseudouridine synthase, Rsu (RefSeq) strong 38 42
  Shewanella loihica PV-4 Shew_2246 pseudouridine synthase (RefSeq) sig. 41 38
  Methylophilus sp. DMC18 GFF891 hypothetical protein insig. 41 34
  Pseudomonas syringae pv. syringae B728a Psyr_3581 ribosomal large subunit pseudouridine synthase B strong 39 38
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3581 ribosomal large subunit pseudouridine synthase B strong 39 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4401 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) insig. 39 38
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04587 hypothetical protein cofit 39 36
  Pseudomonas fluorescens SBW25 PFLU_RS23890 pseudouridine synthase cofit 38 37
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23890 pseudouridine synthase sig. 38 37
  Pseudomonas orientalis W4I3 QF045_RS24380 pseudouridine synthase cofit 38 37
  Erwinia amylovora T8 OLJFJH_13510 23S rRNA pseudouridine(2605) synthase RluB strong 42 37
  Pseudomonas sp. SVBP6 COO64_RS21735 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 40 38
  Pseudomonas simiae WCS417 PS417_22250 pseudouridine synthase sig. 38 37
  Pseudomonas sp. BP01 JOY50_RS01055 rluB 23S rRNA pseudouridine(2605) synthase RluB insig. 40 36
  Pseudomonas putida KT2440 PP_4496 23S rRNA pseudouridine 2605 synthase no data 37 43
  Variovorax sp. OAS795 ABID97_RS14200 pseudouridine synthase strong 41 36
  Acidovorax sp. GW101-3H11 Ac3H11_1789 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 41 35
  Variovorax sp. SCN45 GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) cofit 39 41
  Rhodanobacter denitrificans MT42 LRK55_RS00590 pseudouridine synthase no data 39 42
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00815 pseudouridine synthase strong 39 42
  Shewanella sp. ANA-3 Shewana3_1525 ribosomal large subunit pseudouridine synthase B (RefSeq) strong 42 34
  Acinetobacter radioresistens SK82 MPMX26_02450 Ribosomal large subunit pseudouridine synthase B strong 42 34
  Acinetobacter baumannii LAC-4 RR41_RS15215 23S rRNA pseudouridine(2605) synthase RluB cofit 42 34
  Rhodanobacter sp. FW510-T8 OKGIIK_06425 Pseudouridine synthase sig. 42 38
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS09340 rluB 23S rRNA pseudouridine(2605) synthase RluB strong 39 40
  Pantoea sp. MT58 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB sig. 39 40
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09315 pseudouridine synthase insig. 41 38
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23550 rluB 23S rRNA pseudouridine(2605) synthase RluB cofit 44 34
  Erwinia tracheiphila SCR3 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB sig. 44 34
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02135 pseudouridine synthase insig. 44 35
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 40 36
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase cofit 39 37
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 39 37
  Lysobacter sp. OAE881 ABIE51_RS08775 pseudouridine synthase sig. 39 40
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09485 rRNA pseudouridine synthase insig. 37 38
  Lysobacter sp. OAE881 ABIE51_RS06125 pseudouridine synthase insig. 38 36
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25065 pseudouridylate synthase no data 36 37
  Sinorhizobium meliloti 1021 SM_b20024 ribosomal large subunit pseudouridine synthase B insig. 40 35
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00420 pseudouridine synthase no data 37 33
  Phocaeicola dorei CL03T12C01 ABI39_RS08040 pseudouridine synthase no data 37 33
  Vibrio cholerae E7946 ATCC 55056 CSW01_05970 23S rRNA pseudouridylate synthase B no data 40 36
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18660 pseudouridine synthase no data 35 38
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17510 pseudouridylate synthase strong 35 38
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 40 35
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 39 35
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4091.1 Pseudouridylate synthase insig. 39 35
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 40 35
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2356.1 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) strong 37 43
  Bacteroides thetaiotaomicron VPI-5482 BT3872 ribosomal large subunit pseudouridine synthase B (NCBI ptt file) no data 36 33
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 38 35
  Bacteroides stercoris CC31F HMPREF1181_RS07005 pseudouridine synthase no data 35 33
  Dechlorosoma suillum PS Dsui_2759 pseudouridine synthase family protein insig. 31 36
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11165 pseudouridine synthase no data 32 35
  Bifidobacterium breve UCC2003 BBR_RS15700 rRNA pseudouridine synthase no data 33 38
  Synechocystis sp000284455 PCC 6803 SGL_RS12865 pseudouridine synthase strong 39 34
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 35 34
  Desulfovibrio vulgaris Hildenborough JW710 DVU1669 rluB ribosomal large subunit pseudouridine synthase B (TIGR) insig. 37 40
  Methylophilus sp. DMC18 GFF2067 hypothetical protein insig. 34 35
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 32 35
  Caulobacter crescentus NA1000 CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 34 36
  Caulobacter crescentus NA1000 Δfur CCNA_00898 ribosomal large subunit pseudouridine synthase F cofit 34 36
  Mycobacterium tuberculosis H37Rv Rv1711 Conserved hypothetical protein no data 34 37
  Shewanella sp. ANA-3 Shewana3_0916 pseudouridine synthase, Rsu (RefSeq) insig. 32 36
  Ralstonia sp. UNC404CL21Col ABZR87_RS11810 pseudouridine synthase insig. 31 35
  Cupriavidus basilensis FW507-4G11 RR42_RS11890 16S rRNA pseudouridylate synthase insig. 30 38
  Shewanella amazonensis SB2B Sama_2937 pseudouridine synthase, Rsu (RefSeq) insig. 34 36
  Paraburkholderia sabiae LMG 24235 QEN71_RS06405 pseudouridine synthase cofit 34 35
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00360 16S rRNA pseudouridylate synthase sig. 32 35
  Ralstonia solanacearum UW163 UW163_RS13690 16S rRNA pseudouridylate synthase insig. 32 35
  Ralstonia solanacearum PSI07 RPSI07_RS17115 16S rRNA uridine-516 pseudouridylate synthase sig. 31 38
  Shewanella loihica PV-4 Shew_3180 pseudouridine synthase (RefSeq) insig. 33 38
  Pseudomonas stutzeri RCH2 Psest_3049 pseudouridine synthase insig. 34 32
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 32 36
  Pseudomonas putida KT2440 PP_4778 23S rRNA pseudouridine 2457 synthase insig. 36 27
  Ralstonia solanacearum GMI1000 RS_RS07030 16S rRNA uridine-516 pseudouridylate synthase sig. 32 35
  Castellaniella sp019104865 MT123 ABCV34_RS03070 pseudouridine synthase insig. 32 36
  Dechlorosoma suillum PS Dsui_0824 pseudouridine synthase family protein insig. 30 34
  Pseudomonas aeruginosa PUPa3 DQ20_RS48340 pseudouridine synthase sig. 38 27
  Pseudomonas syringae pv. syringae B728a Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 34 27
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 34 27
  Pseudomonas stutzeri RCH2 Psest_0568 pseudouridine synthase insig. 36 26
  Pseudomonas aeruginosa PA14 IKLFDK_20470 Ribosomal large subunit pseudouridine synthase E insig. 37 27
  Rahnella sp. WP5 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE insig. 35 26
  Bacteroides ovatus ATCC 8483 BACOVA_00362 pseudouridylate synthase no data 36 29
  Pseudomonas aeruginosa MRSN321 DY961_RS13015 pseudouridine synthase strong 37 27
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01375 pseudouridine synthase insig. 32 35
  Paraburkholderia graminis OAS925 ABIE53_002509 23S rRNA pseudouridine2604 synthase insig. 32 37
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 31 39
  Pseudomonas segetis P6 ACVTMO_RS05370 pseudouridine synthase insig. 35 27
  Pseudomonas fluorescens FW300-N2C3 AO356_15455 pseudouridine synthase insig. 34 27
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 33 35
  Shewanella sp. ANA-3 Shewana3_1749 ribosomal large subunit pseudouridine synthase E (RefSeq) insig. 31 28
  Pseudomonas sp. RS175 PFR28_03839 Ribosomal large subunit pseudouridine synthase E insig. 34 27
  Pseudomonas fluorescens SBW25 PFLU_RS26510 pseudouridine synthase insig. 33 27
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26510 pseudouridine synthase insig. 33 27
  Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 30 36
  Castellaniella sp019104865 MT123 ABCV34_RS13900 pseudouridine synthase insig. 36 24
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 35 27
  Pseudomonas protegens RBAN4 FABNJH_27385 Pseudouridine synthase insig. 34 27
  Pseudomonas simiae WCS417 PS417_24580 pseudouridine synthase sig. 33 27
  Pseudomonas protegens RBAN4 FABNJH_07460 Pseudouridine synthase insig. 29 34
  Serratia liquefaciens MT49 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE insig. 37 25
  Rhodospirillum rubrum S1H Rru_A1939 Pseudouridine synthase, Rsu (NCBI) insig. 36 26
  Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 35 35
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 34 27
  Pseudomonas sp. SVBP6 COO64_RS15465 pseudouridine synthase insig. 34 26
  Pseudomonas sp. BP01 JOY50_RS21765 pseudouridine synthase insig. 35 26
  Herbaspirillum seropedicae SmR1 HSERO_RS10860 RNA pseudouridylate synthase insig. 34 36
  Shewanella amazonensis SB2B Sama_2060 pseudouridylate synthase (RefSeq) insig. 32 28
  Vibrio cholerae E7946 ATCC 55056 CSW01_05785 23S rRNA pseudouridine synthase E insig. 31 27
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1070 pseudouridine synthase insig. 35 26
  Shewanella loihica PV-4 Shew_0916 pseudouridine synthase (RefSeq) insig. 32 32
  Pseudomonas sp. SVBP6 COO64_RS16420 pseudouridine synthase insig. 30 34
  Lysobacter sp. OAE881 ABIE51_RS18480 pseudouridine synthase cofit 33 35
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 31 36
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1389 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 34 27
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05064 Ribosomal large subunit pseudouridine synthase E insig. 33 27
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02720 pseudouridine synthase insig. 33 26
  Pseudomonas sp. S08-1 OH686_08840 LSU rRNA pseudouridine(2457) synthase insig. 36 24
  Pseudomonas fluorescens FW300-N2E3 AO353_06330 pseudouridine synthase insig. 33 27
  Rhodanobacter sp. FW510-T8 OKGIIK_16610 Pseudouridine synthase insig. 32 35
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) insig. 30 31
  Methylophilus sp. DMC18 GFF278 Ribosomal large subunit pseudouridine synthase E insig. 32 26
  Burkholderia phytofirmans PsJN BPHYT_RS12155 RNA-binding protein S4 insig. 33 35
  Escherichia coli ECOR27 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 34 27
  Escherichia coli ECRC62 BNILDI_19055 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 34 27
  Escherichia coli BW25113 b1135 ymfC orf, hypothetical protein (VIMSS) sig. 34 27
  Pseudomonas aeruginosa PA14 IKLFDK_03105 Ribosomal small subunit pseudouridine synthase A insig. 31 35
  Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 29 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E insig. 34 27
  Pseudomonas sp. DMC3 GFF3909 Ribosomal large subunit pseudouridine synthase E insig. 34 27
  Pseudomonas sp. DMC3 GFF2251 Ribosomal small subunit pseudouridine synthase A cofit 29 34
  Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 29 35
  Variovorax sp. SCN45 GFF7619 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no data 42 20
  Paraburkholderia graminis OAS925 ABIE53_003276 16S rRNA pseudouridine516 synthase insig. 30 31
  Enterobacter sp. TBS_079 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E insig. 33 26
  Pseudomonas orientalis W4I3 QF045_RS26865 pseudouridine synthase insig. 33 27
  Pseudomonas aeruginosa PUPa3 DQ20_RS44005 16S rRNA pseudouridine(516) synthase insig. 30 35
  Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 27 33
  Escherichia coli ECRC100 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 34 27
  Escherichia coli ECRC101 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 34 27
  Escherichia coli ECRC102 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 34 27
  Escherichia coli ECRC98 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 34 27
  Escherichia coli ECRC99 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE no data 34 27
  Rhodanobacter sp. FW510-T8 OKGIIK_09050 Pseudouridine synthase insig. 33 35
  Azospirillum sp. SherDot2 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E insig. 33 26
  Kangiella aquimarina DSM 16071 B158DRAFT_1837 ribosomal large subunit pseudouridine synthase E (EC 5.4.99.-) insig. 31 26
  Escherichia fergusonii Becca EFB2_02840 Ribosomal large subunit pseudouridine synthase E insig. 33 26
  Escherichia coli BL21 ECD_01133 23S rRNA pseudouridine(2457) synthase insig. 33 27
  Pseudomonas fluorescens FW300-N2C3 AO356_04690 16S rRNA pseudouridine(516) synthase insig. 29 34
  Pseudomonas fluorescens FW300-N2E3 AO353_17535 16S rRNA pseudouridine(516) synthase insig. 29 34
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08260 pseudouridine synthase insig. 35 26
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.351.1 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 34 25
  Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 30 35
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16400 pseudouridine synthase cofit 31 35
  Variovorax sp. SCN45 GFF3530 Pseudouridine synthase insig. 31 36
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15935 rRNA pseudouridine synthase strong 32 35
  Enterobacter asburiae PDN3 EX28DRAFT_0378 pseudouridine synthase insig. 28 32
  Azospirillum brasilense Sp245 AZOBR_RS03795 Pseudouridine synthase insig. 35 26
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01553 Ribosomal small subunit pseudouridine synthase A insig. 30 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 28 34
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12840 rRNA pseudouridine synthase insig. 32 35
  Rhodanobacter denitrificans MT42 LRK55_RS06765 pseudouridine synthase insig. 32 35
  Enterobacter sp. TBS_079 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A insig. 28 34
  Enterobacter asburiae PDN3 EX28DRAFT_1795 pseudouridine synthase insig. 33 26
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF343 tRNA pseudouridine synthase A (EC 4.2.1.70) cofit 30 35
  Paraburkholderia graminis OAS925 ABIE53_003318 23S rRNA pseudouridine2457 synthase insig. 35 26
  Rhodanobacter denitrificans MT42 LRK55_RS15690 pseudouridine synthase cofit 33 35
  Escherichia coli ECOR38 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 32 27
  Variovorax sp. OAS795 ABID97_RS00980 pseudouridine synthase strong 32 35
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07025 pseudouridine synthase insig. 32 35
  Sphingobium sp. HT1-2 GFF872 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) cofit 34 26
  Pseudomonas orientalis W4I3 QF045_RS09740 16S rRNA pseudouridine(516) synthase cofit 30 34
  Pantoea sp. MT58 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE insig. 32 26
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09950 pseudouridine synthase insig. 34 27
  Pseudomonas sp. RS175 PFR28_00665 Ribosomal small subunit pseudouridine synthase A insig. 32 30
  Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 29 35
  Lysobacter sp. OAE881 ABIE51_RS00615 pseudouridine synthase insig. 34 26
  Erwinia tracheiphila SCR3 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 33 26