Homologs of DZA65_RS06565 from Dickeya dianthicola ME23

23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
SEED: LSU m3Psi1915 methyltransferase RlmH
KEGG: hypothetical protein

121 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
o	Dickeya dadantii 3937	DDA3937_RS06175		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	100	100
	Dickeya dianthicola ME23	DZA65_RS06565		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	100	100
o	Dickeya dianthicola 67-19	HGI48_RS06220		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	99	100
o	Pectobacterium carotovorum WPP14	HER17_RS15240		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	96	100
o	Serratia liquefaciens MT49	IAI46_05935		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	94	100
o	Rahnella sp. WP5	EX31_RS23125		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	93	100
o	Pantoea sp. MT58	IAI47_14020		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	92	100
o	Enterobacter asburiae PDN3	EX28DRAFT_2327		rRNA large subunit m3Psi methyltransferase RlmH	no data	92	100
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13516_RS14130	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	91	100
o	Erwinia amylovora T8	OLJFJH_17220		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	90	100
o	Enterobacter sp. TBS_079	MPMX20_01295		Ribosomal RNA large subunit methyltransferase H	insig.	91	100
o	Klebsiella pneumoniae MKP103	KDGMDA_16400		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	90	100
o	Klebsiella pneumoniae MRSN742743	KFA93_RS02225	rlmH;go_function=methyltransferase	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	90	100
o	Erwinia tracheiphila SCR3	LU632_RS16370	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	88	100
o	Klebsiella michiganensis M5al	BWI76_RS08040		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	90	100
o	Erwinia tracheiphila HP pepo 2.2	IJEDHG_02460	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	87	100
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4549		LSU m3Psi1915 methyltransferase RlmH	strong	89	100
o	Escherichia coli BL21	ECD_00605		23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent	no data	89	100
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_03070		Ribosomal RNA large subunit methyltransferase H	no data	89	100
o	Escherichia coli Nissle 1917	ECOLIN_RS03465		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	89	100
o	Escherichia coli BW25113	b0636	ybeA	hypothetical protein (NCBI)	sig.	89	100
o	Escherichia coli ECOR27	NOLOHH_23735	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	88	100
o	Escherichia coli ECOR38	HEPCGN_00915	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	88	100
o	Escherichia coli ECRC100	OKFHMN_07360	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	88	100
o	Escherichia coli ECRC101	MCAODC_26575	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	88	100
o	Escherichia coli ECRC102	NIAGMN_05415	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	88	100
o	Escherichia coli ECRC62	BNILDI_21745	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	88	100
o	Escherichia coli ECRC98	JDDGAC_11005	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	88	100
o	Escherichia coli ECRC99	KEDOAH_20610	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	88	100
o	Escherichia fergusonii Becca	EFB2_03456		Ribosomal RNA large subunit methyltransferase H	sig.	88	100
o	Vibrio cholerae E7946 ATCC 55056	CSW01_04865		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	81	100
o	Shewanella loihica PV-4	Shew_2934		SPOUT methyltransferase superfamily protein (RefSeq)	insig.	78	100
o	Shewanella amazonensis SB2B	Sama_2587		rRNA large subunit methyltransferase (RefSeq)	insig.	77	100
o	Shewanella oneidensis MR-1	SO1169		conserved hypothetical protein TIGR00246 (NCBI ptt file)	strong	74	100
o	Shewanella sp. ANA-3	Shewana3_0996		rRNA large subunit methyltransferase (RefSeq)	strong	74	100
o	Alteromonas macleodii MIT1002	MIT1002_01852		Ribosomal RNA large subunit methyltransferase H	no data	72	100
o	Marinobacter adhaerens HP15	HP15_604		conserved hypothetical protein CHP00246	sig.	62	99
o	Pseudomonas sp. S08-1	OH686_09325		rRNA large subunit m3Psi methyltransferase RlmH	insig.	57	99
o	Kangiella aquimarina DSM 16071	B158DRAFT_0085		rRNA large subunit m3Psi methyltransferase RlmH	strong	58	100
o	Pseudomonas aeruginosa PA14	IKLFDK_20650		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	56	99
o	Pseudomonas aeruginosa MRSN321	DY961_RS12835	rlmH;go_function=methyltransferase	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	99
o	Pseudomonas aeruginosa PUPa3	DQ20_RS48165	rlmH;go_function=methyltransferase	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	99
o	Pseudomonas sp. SVBP6	COO64_RS15615	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	57	99
o	Pseudomonas protegens RBAN4	FABNJH_27535	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	99
o	Pseudomonas sp. BP01	JOY50_RS17695	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	56	99
o	Pseudomonas syringae pv. syringae B728a	Psyr_4366		Protein of unknown function DUF163	no data	56	99
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_4366		Protein of unknown function DUF163	sig.	56	99
o	Pseudomonas sp. RS175	PFR28_03869		Ribosomal RNA large subunit methyltransferase H	sig.	56	99
o	Pseudomonas putida KT2440	PP_4808		23S rRNA m3psi1915 methyltransferase	sig.	55	99
o	Pseudomonas sp. DMC3	GFF3879		Ribosomal RNA large subunit methyltransferase H	insig.	55	99
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2691		LSU m3Psi1915 methyltransferase RlmH	no data	55	99
o	Pseudomonas fluorescens FW300-N2E3	AO353_06480		50S rRNA methyltransferase	sig.	55	99
o	Pseudomonas fluorescens FW300-N2C3	AO356_15305		50S rRNA methyltransferase	strong	55	99
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4996		LSU m3Psi1915 methyltransferase RlmH	strong	55	99
o	Pseudomonas stutzeri RCH2	Psest_0511		rRNA large subunit m3Psi methyltransferase RlmH	sig.	55	99
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_1359		LSU m3Psi1915 methyltransferase RlmH	insig.	55	99
o	Pseudomonas segetis P6	ACVTMO_RS05210	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	54	99
o	Pseudomonas fluorescens SBW25	PFLU_RS26660		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	55	99
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS26660		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	55	99
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_05099		Ribosomal RNA large subunit methyltransferase H	no data	55	99
o	Pseudomonas orientalis W4I3	QF045_RS27015		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	55	99
o	Pseudomonas simiae WCS417	PS417_24730		50S rRNA methyltransferase	no data	55	99
o	Rhodanobacter sp. FW510-T8	OKGIIK_09750	rlmH	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	50	99
o	Rhodanobacter sp000427505 FW510-R12	LRK53_RS07250		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	50	99
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS09055		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	49	99
o	Rhodanobacter denitrificans MT42	LRK55_RS02450		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	49	99
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS02695		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	49	99
o	Lysobacter sp. OAE881	ABIE51_RS06755		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	51	99
o	Paraburkholderia sabiae LMG 24235	QEN71_RS24420		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	51	99
o	Burkholderia phytofirmans PsJN	BPHYT_RS06385		ribosomal RNA large subunit methyltransferase H	insig.	51	99
o	Paraburkholderia graminis OAS925	ABIE53_001541		23S rRNA (pseudouridine1915-N3)-methyltransferase	no data	51	99
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04517		23S rRNA (pseudouridine1915-N3)-methyltransferase	insig.	50	99
o	Herbaspirillum seropedicae SmR1	HSERO_RS17780		50S rRNA methyltransferase	insig.	48	99
o	Acinetobacter baumannii LAC-4	RR41_RS09070		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	46	99
o	Acinetobacter radioresistens SK82	MPMX26_02301		Ribosomal RNA large subunit methyltransferase H	insig.	47	99
o	Cupriavidus basilensis FW507-4G11	RR42_RS04710		50S rRNA methyltransferase	insig.	49	99
o	Variovorax sp. SCN45	GFF298		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177)	insig.	47	100
o	Variovorax sp. OAS795	ABID97_RS16715		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	47	100
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1876.1		LSU m3Psi1915 methyltransferase RlmH	no data	51	90
o	Methylophilus sp. DMC18	GFF827		Ribosomal RNA large subunit methyltransferase H	cofit	46	100
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS15430		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	48	99
o	Ralstonia solanacearum GMI1000	RS_RS11015		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	no data	48	99
o	Ralstonia solanacearum PSI07	RPSI07_RS13660		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	48	99
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF4529		LSU m3Psi1915 methyltransferase RlmH	insig.	49	100
o	Castellaniella sp019104865 MT123	ABCV34_RS02530		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	47	99
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS03565		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	47	99
o	Ralstonia solanacearum UW163	UW163_RS10105		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	47	99
o	Dechlorosoma suillum PS	Dsui_0451		hypothetical protein	insig.	47	100
o	Acidovorax sp. GW101-3H11	Ac3H11_2418		LSU m3Psi1915 methyltransferase RlmH	insig.	46	97
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS15935		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	36	100
o	Phocaeicola dorei CL03T12C01	ABI39_RS11895		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	34	100
o	Bacteroides stercoris CC31F	HMPREF1181_RS10755		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	34	100
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS16715		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	33	100
o	Bacteroides thetaiotaomicron VPI-5482	BT1562		conserved hypothetical protein (NCBI ptt file)	insig.	31	100
o	Bacteroides ovatus ATCC 8483	BACOVA_04305		putative rRNA large subunit m3Psi methyltransferase RlmH	sig.	31	100
o	Methanococcus maripaludis JJ	MMJJ_RS09010		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	28	99
o	Methanococcus maripaludis S2	MMP_RS05365		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	28	99
o	Phaeobacter inhibens DSM 17395	PGA1_c29750		putative ribosomal RNA large subunit methyltransferase	sig.	35	99
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS17055		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	31	100
o	Cellulophaga baltica 18	M666_RS17950		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	29	100
o	Azospirillum sp. SherDot2	MPMX19_01940		Ribosomal RNA large subunit methyltransferase H	insig.	37	100
o	Dinoroseobacter shibae DFL-12	Dshi_0088		protein of unknown function DUF163 (RefSeq)	insig.	36	99
o	Rhizobium sp. OAE497	ABIE40_RS18965		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	34	99
o	Azospirillum brasilense Sp245	AZOBR_RS04060		50S rRNA methyltransferase	insig.	36	99
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS16470		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	sig.	28	99
o	Magnetospirillum magneticum AMB-1	AMB_RS20655		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	37	99
o	Sinorhizobium meliloti 1021	SMc03781		rRNA large subunit methyltransferase	insig.	37	99
o	Fusobacterium nucleatum SB010	HUW76_07715		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	cofit	24	99
	Caulobacter crescentus NA1000	CCNA_03546		rRNA large subunit methyltransferase	sig.	33	100
	Caulobacter crescentus NA1000 Δfur	CCNA_03546		rRNA large subunit methyltransferase	cofit	33	100
	Rhodospirillum rubrum S1H	Rru_A1235		Protein of unknown function DUF163 (NCBI)	sig.	34	99
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS14825		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	32	100
	Agrobacterium fabrum C58	Atu2776		hypothetical protein	insig.	31	99
	Bifidobacterium breve UCC2003	BBR_RS19685		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	strong	28	99
	Sphingobium sp. HT1-2	GFF751		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177)	cofit	33	86
	Desulfovibrio vulgaris Hildenborough JW710	DVU1254		conserved hypothetical protein (TIGR)	insig.	31	99
	Bosea sp. OAE506	ABIE41_RS07565		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	52	37
	Sphingomonas koreensis DSMZ 15582	Ga0059261_2503		Predicted SPOUT methyltransferase	insig.	41	58
	Rhodopseudomonas palustris CGA009	TX73_000870		23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	insig.	40	57
	Desulfovibrio vulgaris Miyazaki F	DvMF_0845		protein of unknown function DUF163 (RefSeq)	insig.	34	97
	Xanthobacter sp. DMC5	GFF3949		Ribosomal RNA large subunit methyltransferase H	no data	36	55