Homologs of CSW01_08380 from Vibrio cholerae E7946 ATCC 55056

TIGR01621 family pseudouridine synthase
SEED: Pseudouridine synthase
KEGG: ribosomal large subunit pseudouridine synthase A

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_08380 TIGR01621 family pseudouridine synthase cofit 100 100
o Shewanella loihica PV-4 Shew_0099 pseudouridine synthase Rlu family protein (RefSeq) insig. 48 97
o Shewanella sp. ANA-3 Shewana3_0284 pseudouridine synthase Rlu family protein (RefSeq) insig. 46 97
o Shewanella amazonensis SB2B Sama_3536 pseudouridine synthase RluA-like protein (RefSeq) insig. 45 97
o Alteromonas macleodii MIT1002 MIT1002_01219 Ribosomal large subunit pseudouridine synthase A insig. 42 96
  Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 35 69
  Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 35 69
  Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 36 70
  Fusobacterium nucleatum SB010 HUW76_08575 RluA family pseudouridine synthase strong 32 77
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 31 80
  Sphingobium sp. HT1-2 GFF1481 RNA pseudouridylate synthase cofit 35 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0048 Pseudouridylate synthases, 23S RNA-specific strong 34 69
  Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 33 74
  Rhodanobacter denitrificans MT42 LRK55_RS10270 pseudouridine synthase insig. 30 79
  Cellulophaga baltica 18 M666_RS13600 RNA pseudouridine synthase insig. 31 82
  Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 34 80
  Rhodanobacter sp. FW510-T8 OKGIIK_13270 pseudouridylate synthase insig. 30 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10060 RluA family pseudouridine synthase insig. 30 83
  Magnetospirillum magneticum AMB-1 AMB_RS16095 RluA family pseudouridine synthase insig. 28 80
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 34 69
  Azospirillum brasilense Sp245 AZOBR_RS31090 pseudouridine synthase insig. 33 77
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20600 RNA pseudouridine synthase sig. 30 79
  Azospirillum sp. SherDot2 MPMX19_03163 hypothetical protein insig. 36 59
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3705 Pseudouridylate synthases, 23S RNA-specific insig. 31 85
  Magnetospirillum magneticum AMB-1 AMB_RS19265 RNA pseudouridine synthase cofit 30 77
  Vibrio cholerae E7946 ATCC 55056 CSW01_14535 RluA family pseudouridine synthase insig. 34 71
  Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 33 82
  Herbaspirillum seropedicae SmR1 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D insig. 33 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 30 83
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 31 72
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10630 pseudouridine synthase insig. 29 79
  Cupriavidus basilensis FW507-4G11 RR42_RS07590 pseudouridine synthase strong 30 83
  Azospirillum sp. SherDot2 MPMX19_05341 hypothetical protein insig. 31 74
  Caulobacter crescentus NA1000 CCNA_00485 ribosomal large subunit pseudouridine synthase D strong 29 81
  Caulobacter crescentus NA1000 Δfur CCNA_00485 ribosomal large subunit pseudouridine synthase D cofit 29 81
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03400 pseudouridine synthase insig. 29 79
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 30 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 30 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19675 RNA pseudouridine synthase strong 35 69
  Azospirillum brasilense Sp245 AZOBR_RS06905 pseudouridine synthase strong 34 69
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15230 RNA pseudouridine synthase sig. 29 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15205 RNA pseudouridine synthase strong 28 87
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 30 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 35 62
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 29 81
  Cellulophaga baltica 18 M666_RS12915 RNA pseudouridine synthase insig. 29 76
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 31 81
  Fusobacterium nucleatum SB010 HUW76_04985 RluA family pseudouridine synthase cofit 29 76
  Castellaniella sp019104865 MT123 ABCV34_RS01885 RluA family pseudouridine synthase strong 29 81
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 28 70
  Xanthobacter sp. DMC5 GFF1347 Ribosomal large subunit pseudouridine synthase C insig. 35 69
  Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 33 69
  Azospirillum brasilense Sp245 AZOBR_RS08300 pseudouridine synthase insig. 32 71
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0583 Pseudouridylate synthases, 23S RNA-specific strong 30 78
  Acidovorax sp. GW101-3H11 Ac3H11_174 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 37 60
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03065 RluA family pseudouridine synthase cofit 33 69
  Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 32 71
  Ralstonia solanacearum GMI1000 RS_RS08205 RluA family pseudouridine synthase sig. 31 70
  Variovorax sp. OAS795 ABID97_RS14190 RluA family pseudouridine synthase strong 30 78
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 31 73
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 31 70
  Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 31 70
  Rhodanobacter denitrificans MT42 LRK55_RS17750 RluA family pseudouridine synthase strong 30 80
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17895 RluA family pseudouridine synthase strong 30 80
  Bosea sp. OAE506 ABIE41_RS05635 RluA family pseudouridine synthase sig. 28 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09185 RNA pseudouridine synthase no data 33 69
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 31 81
  Rhodanobacter sp. FW510-T8 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase sig. 29 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 27 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 32 78
  Pseudomonas sp. BP01 JOY50_RS16355 RluA family pseudouridine synthase insig. 31 73
  Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 30 70
  Methanococcus maripaludis S2 MMP_RS05225 RluA family pseudouridine synthase insig. 27 78
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 31 78
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 30 69
  Dickeya dianthicola 67-19 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 28 78
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 33 60
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 33 60
  Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 26 91
  Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 31 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 30 70
  Dickeya dianthicola ME23 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 28 78
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 34 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 34 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05180 RluA family pseudouridine synthase insig. 34 60
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 34 81
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 33 78
  Sinorhizobium meliloti 1021 SMc00647 ribosomal large subunit pseudouridine synthase strong 28 78
  Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 26 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3559 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 34 60
  Sphingobium sp. HT1-2 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) cofit 30 74
  Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 30 70
  Agrobacterium fabrum C58 Atu2443 ribosomal large subunit pseudouridine synthase, RluD subfamily no data 27 83
  Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 30 78
  Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 29 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04097 Dual-specificity RNA pseudouridine synthase RluA cofit 34 81
  Pseudomonas aeruginosa MRSN321 DY961_RS02100 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 30 77
  Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 30 77
  Pseudomonas aeruginosa PUPa3 DQ20_RS33485 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 30 77
  Dickeya dadantii 3937 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03985 RluA family pseudouridine synthase sig. 27 87
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 26 91
  Cellulophaga baltica 18 M666_RS18455 RluA family pseudouridine synthase insig. 33 66
  Pseudomonas stutzeri RCH2 Psest_1680 pseudouridine synthase, RluA family no data 32 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 31 83
  Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 30 78
  Acinetobacter baumannii LAC-4 RR41_RS16980 RluA family pseudouridine synthase sig. 28 76
  Methanococcus maripaludis JJ MMJJ_RS09155 RluA family pseudouridine synthase insig. 27 78
  Erwinia amylovora T8 OLJFJH_09725 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 26 76
  Acidovorax sp. GW101-3H11 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 31 83
  Pseudomonas orientalis W4I3 QF045_RS21620 RluA family pseudouridine synthase insig. 34 75
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07880 RluA family pseudouridine synthase insig. 32 67
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03255 pseudouridine synthase insig. 29 78
  Rhodopseudomonas palustris CGA009 TX73_001905 RluA family pseudouridine synthase strong 28 86
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 27 81
  Pantoea sp. MT58 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 76
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16540 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 27 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 31 81
  Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 26 90
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 32 75
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06180 pseudouridylate synthase insig. 28 79
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12640 RluA family pseudouridine synthase strong 28 69
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 28 78
  Shewanella loihica PV-4 Shew_2950 RluA family pseudouridine synthase (RefSeq) strong 28 70
  Pectobacterium carotovorum WPP14 HER17_RS05400 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 28 78
  Klebsiella pneumoniae MRSN742743 KFA93_RS00230 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 78
  Shewanella sp. ANA-3 Shewana3_0799 ribosomal large subunit pseudouridine synthase A (RefSeq) insig. 29 83
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_26870 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 26 78
  Erwinia tracheiphila SCR3 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 26 78
  Variovorax sp. SCN45 GFF7036 LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) insig. 34 60
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 25 90
  Bosea sp. OAE506 ABIE41_RS04835 RNA pseudouridine synthase insig. 36 52
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 34 65
  Klebsiella pneumoniae MKP103 KDGMDA_18660 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 31 78
  Kangiella aquimarina DSM 16071 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) insig. 31 79
  Pseudomonas sp. DMC3 GFF2599 Dual-specificity RNA pseudouridine synthase RluA insig. 34 71
  Pseudomonas segetis P6 ACVTMO_RS19440 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5794 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) strong 32 75
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11465 RluA family pseudouridine synthase no data 29 80
  Variovorax sp. SCN45 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) insig. 31 78
  Shewanella sp. ANA-3 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) strong 30 70
  Bacteroides stercoris CC31F HMPREF1181_RS00225 RNA pseudouridine synthase insig. 27 77
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00715 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 31 80
  Enterobacter asburiae PDN3 EX28DRAFT_1359 Pseudouridylate synthases, 23S RNA-specific insig. 30 60
  Escherichia coli BL21 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase strong 27 76
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D sig. 27 76
  Escherichia coli BW25113 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) no data 27 76
  Phocaeicola dorei CL03T12C01 ABI39_RS18705 RluA family pseudouridine synthase insig. 33 60
  Bifidobacterium breve UCC2003 BBR_RS17135 RluA family pseudouridine synthase strong 33 61
  Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 32 80
  Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 32 77
  Magnetospirillum magneticum AMB-1 AMB_RS15620 RluA family pseudouridine synthase cofit 30 77
  Mycobacterium tuberculosis H37Rv Rv1540 Conserved hypothetical protein member of yabO/yceC/yfiI family no data 28 79
  Escherichia fergusonii Becca EFB2_01296 Ribosomal large subunit pseudouridine synthase D sig. 27 76
  Escherichia coli ECOR27 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 27 76
  Escherichia coli ECRC100 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 27 76
  Escherichia coli ECRC101 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 76
  Escherichia coli ECRC102 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 76
  Escherichia coli ECRC62 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 76
  Escherichia coli ECRC98 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 76
  Escherichia coli ECRC99 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no data 27 76
  Escherichia coli Nissle 1917 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 76
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3753 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) sig. 33 83
  Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 30 60
  Escherichia coli ECOR38 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 76
  Pseudomonas fluorescens FW300-N2E3 AO353_02385 pseudouridine synthase no data 33 75
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4194 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 33 83
  Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 31 71
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 31 82
  Pseudomonas syringae pv. syringae B728a Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 33 72
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 33 72
  Dinoroseobacter shibae DFL-12 Dshi_2610 pseudouridine synthase, RluA family (RefSeq) strong 28 70
  Rhodospirillum rubrum S1H Rru_A1111 Pseudouridine synthase, RluD (NCBI) strong 26 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13460 pseudouridine synthase insig. 26 79
  Pseudomonas stutzeri RCH2 Psest_2948 pseudouridine synthase, RluA family sig. 33 67
  Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 31 78
  Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 31 78
  Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 78
  Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 78
  Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 31 78
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 31 78
  Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 78
  Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 31 78
  Ralstonia solanacearum GMI1000 RS_RS05155 RluA family pseudouridine synthase strong 29 81
  Acinetobacter baumannii LAC-4 RR41_RS05195 RluA family pseudouridine synthase insig. 28 81
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02725 RluA family pseudouridine synthase sig. 27 80
  Marinobacter adhaerens HP15 HP15_527 pseudouridine synthase, RluA family strong 27 81
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17320 truC tRNA pseudouridine(65) synthase TruC cofit 27 79
  Erwinia tracheiphila SCR3 LU632_RS06295 truC tRNA pseudouridine(65) synthase TruC insig. 27 79
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06080 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 38 57
  Shewanella loihica PV-4 Shew_2529 pseudouridine synthase (RefSeq) insig. 32 64
  Pseudomonas segetis P6 ACVTMO_RS15920 RluA family pseudouridine synthase insig. 32 82
  Enterobacter sp. TBS_079 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C sig. 32 77
  Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 31 71
  Escherichia coli ECRC100 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 78
  Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 78
  Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 31 78
  Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 31 78
  Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 31 78
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 29 71
  Bacteroides thetaiotaomicron VPI-5482 BT3772 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 27 77
  Pseudomonas sp. RS175 PFR28_03154 Dual-specificity RNA pseudouridine synthase RluA insig. 31 75
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 31 78
  Shewanella amazonensis SB2B Sama_0606 pseudouridylate synthase (RefSeq) sig. 30 81
  Ralstonia solanacearum PSI07 RPSI07_RS19085 RluA family pseudouridine synthase strong 30 81
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14375 RluA family pseudouridine synthase strong 29 81
  Ralstonia solanacearum UW163 UW163_RS11840 RluA family pseudouridine synthase insig. 29 81
  Pseudomonas segetis P6 ACVTMO_RS10270 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 31 76
  Xanthobacter sp. DMC5 GFF3765 hypothetical protein insig. 32 75
  Acinetobacter baumannii LAC-4 RR41_RS18405 RluA family pseudouridine synthase insig. 31 60
  Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 28 77
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17840 RluA family pseudouridine synthase insig. 27 78
  Variovorax sp. OAS795 ABID97_RS08250 RluA family pseudouridine synthase strong 30 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 28 70
  Serratia liquefaciens MT49 IAI46_03985 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 28 76
  Escherichia coli BL21 ECD_00060 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent cofit 34 59
  Escherichia fergusonii Becca EFB2_03987 Dual-specificity RNA pseudouridine synthase RluA insig. 34 59
  Escherichia coli ECOR27 NOLOHH_03150 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 34 59
  Escherichia coli ECOR38 HEPCGN_08795 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 34 59
  Escherichia coli ECRC62 BNILDI_08455 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 34 59
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03600 Ribosomal large subunit pseudouridine synthase A insig. 34 59
  Escherichia coli Nissle 1917 ECOLIN_RS00310 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 34 59
  Escherichia coli BW25113 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) sig. 34 59
  Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 30 76
  Bacteroides ovatus ATCC 8483 BACOVA_03622 pseudouridine synthase, RluA family insig. 27 77
  Erwinia tracheiphila SCR3 LU632_RS02800 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 38 57
  Enterobacter asburiae PDN3 EX28DRAFT_1844 pseudouridine synthase, RluA family insig. 31 80
  Dechlorosoma suillum PS Dsui_3127 23S RNA-specific pseudouridylate synthase insig. 28 71
  Enterobacter sp. TBS_079 MPMX20_00752 Dual-specificity RNA pseudouridine synthase RluA insig. 33 59
  Shewanella amazonensis SB2B Sama_1988 pseudouridylate synthase (RefSeq) strong 31 77
  Pseudomonas aeruginosa PA14 IKLFDK_16600 RNA pseudouridine synthase sig. 31 75
  Pseudomonas orientalis W4I3 QF045_RS23560 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 30 76
  Pectobacterium carotovorum WPP14 HER17_RS16365 tRNA pseudouridine(65) synthase TruC insig. 30 69
  Shewanella amazonensis SB2B Sama_2605 pseudouridylate synthase (RefSeq) no data 28 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13190 RluA family pseudouridine synthase insig. 26 87
  Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 78
  Klebsiella pneumoniae MKP103 KDGMDA_24890 RNA pseudouridine synthase insig. 31 60
  Pseudomonas aeruginosa PUPa3 DQ20_RS40350 RluA family pseudouridine synthase insig. 31 75
  Pseudomonas putida KT2440 PP_1906 ribosomal large subunit pseudouridine synthase C strong 30 76
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF184 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) cofit 30 77
  Pseudomonas sp. BP01 JOY50_RS16830 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 30 76
  Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 29 77
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3374 Pseudouridylate synthases, 23S RNA-specific insig. 28 69
  Shewanella loihica PV-4 Shew_0783 pseudouridylate synthase (RefSeq) no data 31 78
  Pseudomonas aeruginosa MRSN321 DY961_RS00685 RluA family pseudouridine synthase insig. 31 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.296.1 tRNA pseudouridine synthase C (EC 4.2.1.70) insig. 31 68
  Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 31 77
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 70
  Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 29 77
  Klebsiella michiganensis M5al BWI76_RS22850 tRNA pseudouridine synthase TruC insig. 28 79