Homologs of CSW01_08380 from Vibrio cholerae E7946 ATCC 55056

TIGR01621 family pseudouridine synthase
SEED: Pseudouridine synthase
KEGG: ribosomal large subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_08380 TIGR01621 family pseudouridine synthase cofit 100 100
o Shewanella loihica PV-4 Shew_0099 pseudouridine synthase Rlu family protein (RefSeq) insig. 48 97
o Shewanella sp. ANA-3 Shewana3_0284 pseudouridine synthase Rlu family protein (RefSeq) insig. 46 97
o Shewanella amazonensis SB2B Sama_3536 pseudouridine synthase RluA-like protein (RefSeq) insig. 45 97
o Alteromonas macleodii MIT1002 MIT1002_01219 Ribosomal large subunit pseudouridine synthase A insig. 42 96
  Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 35 69
  Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 35 69
  Azospirillum sp. SherDot2 MPMX19_05442 Ribosomal large subunit pseudouridine synthase D strong 36 70
  Fusobacterium nucleatum SB010 HUW76_08575 RluA family pseudouridine synthase strong 32 77
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 31 80
  Sphingobium sp. HT1-2 GFF1481 RNA pseudouridylate synthase cofit 35 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0048 Pseudouridylate synthases, 23S RNA-specific strong 34 69
  Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 33 74
  Rhodanobacter denitrificans MT42 LRK55_RS10270 pseudouridine synthase insig. 30 79
o Cellulophaga baltica 18 M666_RS13600 RNA pseudouridine synthase insig. 31 82
  Rhodanobacter sp. FW510-T8 OKGIIK_13270 pseudouridylate synthase insig. 30 79
  Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 34 80
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10060 RluA family pseudouridine synthase insig. 30 83
  Magnetospirillum magneticum AMB-1 AMB_RS16095 RluA family pseudouridine synthase insig. 28 80
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 34 69
  Azospirillum brasilense Sp245 AZOBR_RS31090 pseudouridine synthase insig. 33 77
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20600 RNA pseudouridine synthase sig. 30 79
  Azospirillum sp. SherDot2 MPMX19_03163 hypothetical protein insig. 36 59
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3705 Pseudouridylate synthases, 23S RNA-specific insig. 31 85
  Magnetospirillum magneticum AMB-1 AMB_RS19265 RNA pseudouridine synthase cofit 30 77
  Vibrio cholerae E7946 ATCC 55056 CSW01_14535 RluA family pseudouridine synthase insig. 34 71
  Rhodospirillum rubrum S1H Rru_A2659 Pseudouridine synthase, RluD (NCBI) no data 33 82
  Herbaspirillum seropedicae SmR1 HSERO_RS15070 ribosomal large subunit pseudouridine synthase D insig. 33 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS22215 RluA family pseudouridine synthase no data 30 83
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 31 72
  Cupriavidus basilensis FW507-4G11 RR42_RS07590 pseudouridine synthase strong 30 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10630 pseudouridine synthase insig. 29 79
  Azospirillum sp. SherDot2 MPMX19_05341 hypothetical protein insig. 31 74
  Caulobacter crescentus NA1000 CCNA_00485 ribosomal large subunit pseudouridine synthase D strong 29 81
  Caulobacter crescentus NA1000 Δfur CCNA_00485 ribosomal large subunit pseudouridine synthase D cofit 29 81
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03400 pseudouridine synthase insig. 29 79
  Burkholderia phytofirmans PsJN BPHYT_RS09135 ribosomal large subunit pseudouridine synthase D sig. 30 83
  Azospirillum brasilense Sp245 AZOBR_RS06905 pseudouridine synthase strong 34 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00848 ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) insig. 30 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19675 RNA pseudouridine synthase strong 35 69
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15230 RNA pseudouridine synthase sig. 29 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15205 RNA pseudouridine synthase strong 28 87
  Paraburkholderia graminis OAS925 ABIE53_002062 23S rRNA pseudouridine1911/1915/1917 synthase strong 30 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 35 62
  Rhizobium sp. OAE497 ABIE40_RS14790 RluA family pseudouridine synthase sig. 29 81
  Cellulophaga baltica 18 M666_RS12915 RNA pseudouridine synthase insig. 29 76
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 31 81
  Fusobacterium nucleatum SB010 HUW76_04985 RluA family pseudouridine synthase cofit 29 76
  Castellaniella sp019104865 MT123 ABCV34_RS01885 RluA family pseudouridine synthase strong 29 81
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 28 70
  Xanthobacter sp. DMC5 GFF1347 Ribosomal large subunit pseudouridine synthase C insig. 35 69
  Azospirillum sp. SherDot2 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C insig. 33 69
  Azospirillum brasilense Sp245 AZOBR_RS08300 pseudouridine synthase insig. 32 71
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0583 Pseudouridylate synthases, 23S RNA-specific strong 30 78
  Acidovorax sp. GW101-3H11 Ac3H11_174 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 37 60
  Variovorax sp. OAS795 ABID97_RS14190 RluA family pseudouridine synthase strong 30 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03065 RluA family pseudouridine synthase cofit 33 69
  Sinorhizobium meliloti 1021 SMc01275 ribosomal large subunit pseudouridine synthase C protein strong 32 71
  Ralstonia solanacearum GMI1000 RS_RS08205 RluA family pseudouridine synthase sig. 31 70
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 31 73
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01520 RluA family pseudouridine synthase insig. 31 70
  Ralstonia solanacearum UW163 UW163_RS14830 RluA family pseudouridine synthase insig. 31 70
  Rhodanobacter denitrificans MT42 LRK55_RS17750 RluA family pseudouridine synthase strong 30 80
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17895 RluA family pseudouridine synthase strong 30 80
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 31 81
  Bosea sp. OAE506 ABIE41_RS05635 RluA family pseudouridine synthase sig. 28 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09185 RNA pseudouridine synthase no data 33 69
  Rhodanobacter sp. FW510-T8 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase cofit 29 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 27 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 32 78
  Pseudomonas sp. BP01 JOY50_RS16355 RluA family pseudouridine synthase insig. 31 73
  Bosea sp. OAE506 ABIE41_RS14710 RluA family pseudouridine synthase insig. 30 69
  Cellulophaga baltica 18 M666_RS09010 RluA family pseudouridine synthase sig. 30 70
  Methanococcus maripaludis S2 MMP_RS05225 RluA family pseudouridine synthase insig. 27 78
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 31 78
  Dickeya dianthicola 67-19 HGI48_RS16235 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 28 78
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 33 60
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 33 60
  Dickeya dianthicola ME23 DZA65_RS17330 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 28 78
  Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 26 91
  Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 31 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS13315 RluA family pseudouridine synthase strong 30 70
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 34 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 34 81
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 33 78
  Sinorhizobium meliloti 1021 SMc00647 ribosomal large subunit pseudouridine synthase strong 28 78
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05180 RluA family pseudouridine synthase insig. 34 60
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 34 81
  Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 26 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3559 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 34 60
  Sphingobium sp. HT1-2 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) cofit 30 74
  Ralstonia solanacearum PSI07 RPSI07_RS15970 RluA family pseudouridine synthase insig. 30 70
  Agrobacterium fabrum C58 Atu2443 ribosomal large subunit pseudouridine synthase, RluD subfamily no data 27 83
  Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 30 78
  Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 29 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04097 Dual-specificity RNA pseudouridine synthase RluA cofit 34 81
  Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 30 77
  Dickeya dadantii 3937 DDA3937_RS16110 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 27 78
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03985 RluA family pseudouridine synthase sig. 27 87
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 26 91