Homologs of CSW01_02745 from Vibrio cholerae E7946 ATCC 55056

RNA polymerase sigma factor RpoD
SEED: RNA polymerase sigma factor RpoD
KEGG: RNA polymerase primary sigma factor

Top 250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_02745 RNA polymerase sigma factor RpoD no data 100 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3177 RNA polymerase sigma factor RpoD no data 77 100
o Enterobacter asburiae PDN3 EX28DRAFT_3102 RNA polymerase, sigma 70 subunit, RpoD no data 76 100
o Enterobacter sp. TBS_079 MPMX20_03909 RNA polymerase sigma factor RpoD no data 77 100
o Klebsiella michiganensis M5al BWI76_RS24555 RNA polymerase sigma factor RpoD no data 76 100
o Serratia liquefaciens MT49 IAI46_22125 RNA polymerase sigma factor RpoD no data 75 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11870 RNA polymerase sigma factor RpoD no data 77 100
o Pantoea sp. MT58 IAI47_03050 RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECOR27 NOLOHH_10445 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECOR38 HEPCGN_17510 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECRC100 OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECRC101 MCAODC_09170 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECRC102 NIAGMN_16420 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECRC62 BNILDI_01070 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECRC98 JDDGAC_22290 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli ECRC99 KEDOAH_09490 rpoD RNA polymerase sigma factor RpoD no data 77 100
o Klebsiella pneumoniae MRSN742743 KFA93_RS12625 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 76 100
o Escherichia fergusonii Becca EFB2_00744 RNA polymerase sigma factor RpoD no data 77 100
o Erwinia amylovora T8 OLJFJH_07585 RNA polymerase sigma factor RpoD no data 76 100
o Escherichia coli BL21 ECD_02937 RNA polymerase, sigma 70 (sigma D) factor no data 77 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00635 RNA polymerase sigma factor RpoD no data 77 100
o Escherichia coli BW25113 b3067 rpoD RNA polymerase sigma factor (NCBI) no data 76 100
o Pectobacterium carotovorum WPP14 HER17_RS18415 RNA polymerase sigma factor RpoD no data 76 100
o Klebsiella pneumoniae MKP103 KDGMDA_05365 RNA polymerase sigma factor RpoD no data 76 100
o Rahnella sp. WP5 EX31_RS08195 RNA polymerase sigma factor RpoD no data 76 100
o Erwinia tracheiphila SCR3 LU632_RS20725 rpoD RNA polymerase sigma factor RpoD no data 76 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_14330 rpoD RNA polymerase sigma factor RpoD no data 76 100
o Dickeya dadantii 3937 DDA3937_RS02945 RNA polymerase sigma factor RpoD no data 73 100
o Dickeya dianthicola ME23 DZA65_RS03105 RNA polymerase sigma factor RpoD no data 74 100
o Dickeya dianthicola 67-19 HGI48_RS03110 RNA polymerase sigma factor RpoD no data 74 100
o Shewanella sp. ANA-3 Shewana3_3087 RNA polymerase, sigma 70 subunit, RpoD (RefSeq) no data 74 100
o Shewanella oneidensis MR-1 SO1284 rpoD RNA polymerase sigma-70 factor (NCBI ptt file) no data 74 100
o Shewanella amazonensis SB2B Sama_0823 RNA polymerase sigma-70 factor (RefSeq) no data 74 100
o Alteromonas macleodii MIT1002 MIT1002_00733 Sigma-70 no data 72 100
o Shewanella loihica PV-4 Shew_0996 RpoD family RNA polymerase sigma factor (RefSeq) no data 74 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0818 RNA polymerase sigma factor, sigma-70 family no data 67 100
o Pseudomonas syringae pv. syringae B728a Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 66 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4641 RNA polymerase, sigma 70 subunit, RpoD no data 66 99
o Pseudomonas stutzeri RCH2 Psest_3682 RNA polymerase sigma factor, sigma-70 family no data 66 99
o Pseudomonas sp. BP01 JOY50_RS18070 rpoD RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas sp. RS175 PFR28_04078 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas fluorescens FW300-N2C3 AO356_14265 RNA polymerase subunit sigma-70 no data 66 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4791 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas putida KT2440 PP_0387 RNA polymerase, sigma 70 (sigma D) factor no data 66 99
o Pseudomonas fluorescens SBW25 PFLU_RS27535 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27535 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas aeruginosa MRSN321 DY961_RS22905 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 68 99
o Pseudomonas aeruginosa PA14 IKLFDK_22530 RNA polymerase sigma factor RpoD no data 68 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS36440 rpoD;go_function=DNA-binding RNA polymerase sigma factor RpoD no data 68 99
o Pseudomonas simiae WCS417 PS417_25880 RNA polymerase subunit sigma-70 no data 66 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05296 RNA polymerase sigma factor RpoD no data 65 99
o Pseudomonas sp. SVBP6 COO64_RS22580 rpoD RNA polymerase sigma factor RpoD no data 67 99
o Pseudomonas fluorescens FW300-N2E3 AO353_07385 RNA polymerase subunit sigma-70 no data 65 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1186 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas orientalis W4I3 QF045_RS00280 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2513 RNA polymerase sigma factor RpoD no data 65 99
o Marinobacter adhaerens HP15 HP15_315 RNA polymerase, sigma 70 subunit, RpoD no data 65 100
o Pseudomonas sp. S08-1 OH686_14970 RNA polymerase sigma factor RpoD no data 66 99
o Pseudomonas sp. DMC3 GFF51 RNA polymerase sigma factor RpoD no data 65 99
o Pseudomonas segetis P6 ACVTMO_RS04280 rpoD RNA polymerase sigma factor RpoD no data 66 99
o Acinetobacter radioresistens SK82 MPMX26_00713 RNA polymerase sigma factor RpoD no data 60 100
o Acinetobacter baumannii LAC-4 RR41_RS03995 RNA polymerase sigma factor RpoD no data 61 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13945 RNA polymerase sigma factor RpoD no data 62 99
o Rhodanobacter denitrificans MT42 LRK55_RS07055 RNA polymerase sigma factor RpoD no data 62 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS07325 RNA polymerase sigma factor RpoD no data 62 99
o Rhodanobacter sp. FW510-T8 OKGIIK_13865 rpoD RNA polymerase sigma factor RpoD no data 61 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS01085 RNA polymerase sigma factor RpoD no data 61 99
o Lysobacter sp. OAE881 ABIE51_RS02310 RNA polymerase sigma factor RpoD no data 60 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4729.1 RNA polymerase sigma factor RpoD no data 60 99
o Cupriavidus basilensis FW507-4G11 RR42_RS14965 hypothetical protein strong 57 99
  Herbaspirillum seropedicae SmR1 HSERO_RS04365 RNA polymerase sigma factor RpoD no data 57 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS15185 RNA polymerase sigma factor RpoD strong 57 99
o Castellaniella sp019104865 MT123 ABCV34_RS02695 RNA polymerase sigma factor RpoD no data 55 99
  Ralstonia solanacearum PSI07 RPSI07_RS13555 RNA polymerase sigma factor RpoD no data 57 99
o Burkholderia phytofirmans PsJN BPHYT_RS33535 RNA polymerase sigma factor RpoD strong 56 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03675 RNA polymerase sigma factor RpoD no data 57 99
  Ralstonia solanacearum UW163 UW163_RS09995 RNA polymerase sigma factor RpoD no data 57 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06008 RNA polymerase, sigma 70 subunit, RpoD strong 57 99
o Paraburkholderia graminis OAS925 ABIE53_004866 RNA polymerase primary sigma factor strong 57 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS15600 RNA polymerase sigma factor RpoD no data 57 99
  Ralstonia solanacearum GMI1000 RS_RS11120 RNA polymerase sigma factor RpoD no data 57 99
  Variovorax sp. SCN45 GFF2879 RNA polymerase sigma factor RpoD no data 54 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3822 RNA polymerase sigma factor RpoD no data 54 99
  Acidovorax sp. GW101-3H11 Ac3H11_194 RNA polymerase sigma factor RpoD no data 53 100
  Variovorax sp. OAS795 ABID97_RS10535 RNA polymerase sigma factor RpoD no data 54 99
  Cupriavidus basilensis FW507-4G11 RR42_RS10750 DNA-directed RNA polymerase sigma-70 factor no data 49 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03902 RNA polymerase, sigma 70 subunit, RpoD strong 50 99
  Burkholderia phytofirmans PsJN BPHYT_RS32590 RNA polymerase sigma factor RpoD no data 49 99
  Sphingobium sp. HT1-2 GFF2093 RNA polymerase sigma factor RpoD no data 48 99
o Dinoroseobacter shibae DFL-12 Dshi_2261 RNA polymerase, sigma 70 subunit, RpoD family (RefSeq) no data 48 99
o Azospirillum brasilense Sp245 AZOBR_RS10905 RNA polymerase sigma factor RpoD no data 50 99
o Phaeobacter inhibens DSM 17395 PGA1_c08800 RNA polymerase sigma factor RpoD no data 48 99
o Xanthobacter sp. DMC5 GFF3244 RNA polymerase sigma factor RpoD no data 49 99
  Sinorhizobium meliloti 1021 SMc01563 RNA polymerase sigma factor RpoD no data 48 99
  Agrobacterium fabrum C58 Atu2167 RNA polymerase sigma factor RpoD no data 49 99
  Sphingomonas koreensis DSMZ 15582 Ga0059261_4238 RNA polymerase sigma factor RpoD, C-terminal domain no data 48 99
  Rhodopseudomonas palustris CGA009 TX73_006610 RNA polymerase sigma factor RpoD no data 47 99
  Rhizobium sp. OAE497 ABIE40_RS12720 RNA polymerase sigma factor RpoD no data 49 99
  Methylophilus sp. DMC18 GFF2349 RNA polymerase sigma factor RpoD no data 70 58
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10595 RNA polymerase sigma factor RpoD no data 48 99
  Caulobacter crescentus NA1000 CCNA_03142 RNA polymerase sigma factor rpoD no data 47 99
  Caulobacter crescentus NA1000 Δfur CCNA_03142 RNA polymerase sigma factor rpoD no data 47 99
  Dechlorosoma suillum PS Dsui_1209 RNA polymerase sigma factor, sigma-70 family no data 68 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU1788 rpoD RNA polymerase sigma-70 factor (TIGR) no data 44 99
  Desulfovibrio vulgaris Miyazaki F DvMF_0494 RNA polymerase, sigma 70 subunit, RpoD subfamily (RefSeq) no data 43 99
  Magnetospirillum magneticum AMB-1 AMB_RS03585 RNA polymerase sigma factor RpoD no data 64 57
  Rhodospirillum rubrum S1H Rru_A2882 Sigma 70 (RpoD) (NCBI) no data 62 58
  Bosea sp. OAE506 ABIE41_RS11995 RNA polymerase sigma factor RpoD no data 63 58
  Paraburkholderia graminis OAS925 ABIE53_004960 RNA polymerase primary sigma factor strong 59 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS13555 RNA polymerase sigma factor RpoD no data 57 57
  Bifidobacterium breve UCC2003 BBR_RS16480 RNA polymerase sigma factor no data 57 40
  Fusobacterium nucleatum SB010 HUW76_03650 RNA polymerase sigma factor RpoD no data 65 38
  Mycobacterium tuberculosis H37Rv Rv2703 RNA polymerase sigma factor SigA (sigma-A) no data 60 38
  Synechococcus elongatus PCC 7942 Synpcc7942_0649 rpoD1 RNA polymerase sigma factor RpoD no data 59 38
  Synechocystis sp000284455 PCC 6803 SGL_RS17245 RNA polymerase sigma factor RpoD no data 59 38
  Mycobacterium tuberculosis H37Rv Rv2710 RNA polymerase sigma factor SigB no data 49 43
  Shewanella amazonensis SB2B Sama_0276 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like protein (RefSeq) insig. 35 94
  Synechococcus elongatus PCC 7942 Synpcc7942_1849 sigC RNA polymerase sigma factor SigC strong 45 44
  Synechococcus elongatus PCC 7942 Synpcc7942_1746 rpoD2 group2 RNA polymerase sigma factor SigB strong 44 39
  Synechocystis sp000284455 PCC 6803 SGL_RS07740 RNA polymerase sigma factor, RpoD/SigA family strong 46 41
  Synechococcus elongatus PCC 7942 Synpcc7942_1557 rpoD6 principal RNA polymerase sigma factor SigA strong 46 37
  Synechocystis sp000284455 PCC 6803 SGL_RS12540 RNA polymerase sigma factor, RpoD/SigA family strong 44 39
  Synechocystis sp000284455 PCC 6803 SGL_RS14610 RNA polymerase sigma factor SigC cofit 46 40
  Synechocystis sp000284455 PCC 6803 SGL_RS07975 RNA polymerase sigma factor, RpoD/SigA family strong 47 40
  Vibrio cholerae E7946 ATCC 55056 CSW01_02835 RNA polymerase sigma factor RpoS cofit 41 45
  Cellulophaga baltica 18 M666_RS08520 sigma-70 family RNA polymerase sigma factor no data 43 38
  Synechococcus elongatus PCC 7942 Synpcc7942_0569 rpoD4 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like strong 46 36
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16420 RNA polymerase sigma factor RpoD/SigA no data 41 43
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3437 RNA polymerase sigma factor, sigma-70 family no data 42 38
  Synechococcus elongatus PCC 7942 Synpcc7942_0672 rpoD3 RNA polymerase sigma factor SigD sig. 42 40
  Phocaeicola dorei CL03T12C01 ABI39_RS13985 RNA polymerase sigma factor RpoD/SigA no data 41 43
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17770 RNA polymerase sigma factor RpoD/SigA no data 41 43
  Bacteroides ovatus ATCC 8483 BACOVA_00615 Sigma-70 region 2 no data 41 43
  Bacteroides stercoris CC31F HMPREF1181_RS10780 RNA polymerase sigma factor RpoD/SigA no data 41 43
  Bacteroides thetaiotaomicron VPI-5482 BT1311 RNA polymerase sigma factor rpoD (Sigma-A) (NCBI ptt file) no data 41 43
  Dickeya dadantii 3937 DDA3937_RS16875 RNA polymerase sigma factor RpoS no data 43 38
  Dickeya dianthicola ME23 DZA65_RS18020 RNA polymerase sigma factor RpoS sig. 43 38
  Dickeya dianthicola 67-19 HGI48_RS16945 RNA polymerase sigma factor RpoS insig. 43 38
  Erwinia amylovora T8 OLJFJH_09380 RNA polymerase sigma factor RpoS sig. 42 38
  Klebsiella pneumoniae MKP103 KDGMDA_03220 RNA polymerase sigma factor RpoS strong 42 38
  Klebsiella pneumoniae MRSN742743 KFA93_RS18590 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 42 38
  Serratia liquefaciens MT49 IAI46_03790 RNA polymerase sigma factor RpoS strong 42 38
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04885 RNA polymerase subunit sigma no data 41 38
  Alteromonas macleodii MIT1002 MIT1002_00625 RNA polymerase sigma factor RpoS strong 45 36
  Escherichia coli BL21 ECD_02591 RNA polymerase, sigma S (sigma 38) factor cofit 42 38
  Escherichia fergusonii Becca EFB2_01169 RNA polymerase sigma factor RpoS cofit 42 38
  Escherichia coli ECOR27 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Escherichia coli ECOR38 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Escherichia coli ECRC101 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Escherichia coli ECRC102 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Escherichia coli ECRC62 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Escherichia coli ECRC98 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00992 RNA polymerase sigma factor RpoS insig. 42 38
  Escherichia coli BW25113 b2741 rpoS RNA polymerase sigma factor (NCBI) strong 42 38
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4788 RNA polymerase sigma factor RpoS strong 42 38
  Pantoea sp. MT58 IAI47_04235 RNA polymerase sigma factor RpoS strong 42 38
  Pectobacterium carotovorum WPP14 HER17_RS04350 RNA polymerase sigma factor RpoS strong 42 38
  Shewanella loihica PV-4 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) insig. 43 40
  Enterobacter asburiae PDN3 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS strong 42 38
  Enterobacter sp. TBS_079 MPMX20_03627 RNA polymerase sigma factor RpoS strong 42 38
  Escherichia coli ECRC100 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS cofit 42 38
  Pseudomonas sp. S08-1 OH686_18185 RNA polymerase sigma factor RpoS cofit 43 36
  Rahnella sp. WP5 EX31_RS07825 RNA polymerase sigma factor RpoS strong 42 38
  Klebsiella michiganensis M5al BWI76_RS22645 RNA polymerase sigma factor RpoS strong 41 40
  Marinobacter adhaerens HP15 HP15_1283 RNA polymerase, sigma 70 subunit, RpoD family strong 43 36
  Cellulophaga baltica 18 M666_RS16995 RNA polymerase sigma factor RpoD/SigA strong 40 40
  Escherichia coli ECRC99 KEDOAH_07640 rpoS RNA polymerase sigma factor RpoS no data 43 35
  Pseudomonas stutzeri RCH2 Psest_2806 RNA polymerase sigma factor RpoS strong 42 36
  Shewanella oneidensis MR-1 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) sig. 42 40
  Herbaspirillum seropedicae SmR1 HSERO_RS14830 RNA polymerase sigma factor RpoS insig. 42 36
  Shewanella sp. ANA-3 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) sig. 42 40
  Pseudomonas aeruginosa MRSN321 DY961_RS14865 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas aeruginosa PA14 IKLFDK_18495 RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas aeruginosa PUPa3 DQ20_RS42260 rpoS;go_function=DNA RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas segetis P6 ACVTMO_RS16960 rpoS RNA polymerase sigma factor RpoS strong 42 36
  Shewanella amazonensis SB2B Sama_1044 RNA polymerase sigma-38 factor (RefSeq) sig. 41 36
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4674 RNA polymerase sigma factor RpoS strong 42 36
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS04285 RNA polymerase sigma factor RpoD no data 42 38
  Pseudomonas sp. RS175 PFR28_00427 RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas fluorescens FW300-N2E3 AO353_16615 RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas sp. DMC3 GFF2084 RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas syringae pv. syringae B728a Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS sig. 42 36
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS cofit 42 36
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3115 RNA polymerase sigma factor RpoS strong 42 36
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15895 RNA polymerase sigma factor RpoD/SigA no data 42 38
  Pseudomonas fluorescens FW300-N2C3 AO356_05885 RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3037 RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas fluorescens SBW25 PFLU_RS06430 RNA polymerase sigma factor RpoS cofit 42 36
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06430 RNA polymerase sigma factor RpoS strong 42 36
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01443 RNA polymerase sigma factor RpoS cofit 42 36
  Pseudomonas sp. SVBP6 COO64_RS19795 rpoS RNA polymerase sigma factor RpoS insig. 42 36
  Pseudomonas orientalis W4I3 QF045_RS09210 RNA polymerase sigma factor RpoS insig. 42 36
  Pseudomonas simiae WCS417 PS417_06365 RNA polymerase sigma factor strong 42 36
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17500 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Erwinia tracheiphila SCR3 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS strong 42 38
  Pseudomonas sp. BP01 JOY50_RS23755 rpoS RNA polymerase sigma factor RpoS insig. 42 36
  Pseudomonas putida KT2440 PP_1623 RNA polymerase, sigma S (sigma 38) factor strong 42 36
  Cellulophaga baltica 18 M666_RS16155 RNA polymerase sigma factor RpoD/SigA insig. 39 37
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15235 RNA polymerase sigma factor RpoS strong 41 40
  Ralstonia solanacearum UW163 UW163_RS12700 RNA polymerase sigma factor RpoS sig. 41 40
  Cupriavidus basilensis FW507-4G11 RR42_RS13185 RNA polymerase sigma factor RpoS strong 42 37
  Ralstonia solanacearum PSI07 RPSI07_RS18140 RNA polymerase sigma factor RpoS strong 40 39
  Ralstonia sp. UNC404CL21Col ABZR87_RS10875 RNA polymerase sigma factor RpoS strong 40 39
  Ralstonia solanacearum GMI1000 RS_RS06045 RNA polymerase sigma factor RpoS strong 40 39
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16485 RNA polymerase sigma factor RpoD/SigA insig. 39 36
  Dechlorosoma suillum PS Dsui_1971 RNA polymerase sigma factor RpoS cofit 40 38
  Burkholderia phytofirmans PsJN BPHYT_RS09115 RNA polymerase sigma factor RpoS sig. 39 41
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS no data 39 41
  Paraburkholderia graminis OAS925 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor strong 39 41
  Paraburkholderia sabiae LMG 24235 QEN71_RS22240 RNA polymerase sigma factor RpoS cofit 39 41
  Ralstonia solanacearum PSI07 RPSI07_RS07910 RNA polymerase sigma factor insig. 41 37
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2597 RNA polymerase sigma factor, sigma-70 family insig. 37 38
  Rhodanobacter denitrificans MT42 LRK55_RS09025 sigma-70 family RNA polymerase sigma factor insig. 44 31
  Marinobacter adhaerens HP15 HP15_3857 RNA polymerase, sigma 70 subunit, RpoD family insig. 32 37
  Variovorax sp. SCN45 GFF2842 RNA polymerase sigma factor RpoS insig. 37 38
  Variovorax sp. OAS795 ABID97_RS10730 sigma-70 family RNA polymerase sigma factor insig. 37 36
  Desulfovibrio vulgaris Hildenborough JW710 DVU1584 rpoH sigma 70 family protein (TIGR) no data 34 35
  Desulfovibrio vulgaris Miyazaki F DvMF_0477 putative RNA polymerase, sigma 70 family subunit (RefSeq) no data 35 38
  Azospirillum sp. SherDot2 MPMX19_00761 RNA polymerase sigma factor RpoD no data 44 25
  Azospirillum brasilense Sp245 AZOBR_RS00930 RNA polymerase sigma 70 insig. 32 39
  Azospirillum sp. SherDot2 MPMX19_01046 RNA polymerase sigma factor RpoH insig. 32 40
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03735 RNA polymerase sigma factor RpoH no data 32 36
  Azospirillum sp. SherDot2 MPMX19_05595 RNA polymerase sigma factor RpoH insig. 35 37
  Azospirillum brasilense Sp245 AZOBR_RS08905 RNA polymerase sigma 70 sig. 33 36
  Rhodospirillum rubrum S1H Rru_A1021 Sigma 32 (RpoH) (NCBI) strong 32 37
  Azospirillum brasilense Sp245 AZOBR_RS21830 RNA polymerase sigma 70 insig. 33 36
  Azospirillum sp. SherDot2 MPMX19_02324 RNA polymerase sigma factor RpoH insig. 32 40
  Sinorhizobium meliloti 1021 SMc03873 RNA polymerase factor sigma-32 insig. 31 36
  Magnetospirillum magneticum AMB-1 AMB_RS14115 RNA polymerase sigma factor RpoH no data 35 36
  Bosea sp. OAE506 ABIE41_RS05630 RNA polymerase sigma factor RpoH sig. 30 38
  Castellaniella sp019104865 MT123 ABCV34_RS13215 RNA polymerase sigma factor RpoH no data 31 36
  Azospirillum sp. SherDot2 MPMX19_05441 RNA polymerase sigma factor RpoH no data 30 36
  Dechlorosoma suillum PS Dsui_1121 alternative sigma factor RpoH no data 33 36
  Rhodospirillum rubrum S1H Rru_A1110 Sigma 32 (RpoH) (NCBI) sig. 32 36
  Azospirillum brasilense Sp245 AZOBR_RS10665 RNA polymerase sigma 70 strong 31 37
  Azospirillum brasilense Sp245 AZOBR_RS21510 RNA polymerase sigma 70 insig. 28 40
  Rhodanobacter denitrificans MT42 LRK55_RS10650 RNA polymerase sigma factor RpoH no data 31 40
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10945 RNA polymerase sigma factor RpoH no data 31 40
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10065 RNA polymerase sigma factor RpoH no data 30 37
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12575 RNA polymerase sigma factor RpoH no data 31 40
  Caulobacter crescentus NA1000 CCNA_03195 RNA polymerase sigma factor RpoH no data 31 37
  Caulobacter crescentus NA1000 Δfur CCNA_03195 RNA polymerase sigma factor RpoH no data 31 37
  Sinorhizobium meliloti 1021 SMc00646 RNA polymerase factor sigma-32 no data 30 38
  Herbaspirillum seropedicae SmR1 HSERO_RS20735 RNA polymerase sigma 70 no data 31 42
  Azospirillum sp. SherDot2 MPMX19_03673 RNA polymerase sigma factor RpoH insig. 29 42
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0665 alternative sigma factor RpoH no data 31 36
  Rhodopseudomonas palustris CGA009 TX73_001900 RNA polymerase sigma factor RpoH no data 29 38
  Rhizobium sp. OAE497 ABIE40_RS18645 RNA polymerase factor sigma-32 insig. 30 36
  Paraburkholderia sabiae LMG 24235 QEN71_RS01625 RNA polymerase sigma factor RpoH no data 30 36
  Xanthobacter sp. DMC5 GFF2509 RNA polymerase sigma factor RpoH no data 30 36