Homologs of CCNA_03546 from Caulobacter crescentus NA1000

rRNA large subunit methyltransferase
SEED: LSU m3Psi1915 methyltransferase RlmH
KEGG: hypothetical protein

121 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Caulobacter crescentus NA1000 CCNA_03546 rRNA large subunit methyltransferase sig. 100 100
o Caulobacter crescentus NA1000 Δfur CCNA_03546 rRNA large subunit methyltransferase cofit 100 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14825 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 66 89
o Dinoroseobacter shibae DFL-12 Dshi_0088 protein of unknown function DUF163 (RefSeq) insig. 53 88
o Phaeobacter inhibens DSM 17395 PGA1_c29750 putative ribosomal RNA large subunit methyltransferase sig. 52 88
o Agrobacterium fabrum C58 Atu2776 hypothetical protein insig. 45 88
o Rhizobium sp. OAE497 ABIE40_RS18965 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 43 88
o Sinorhizobium meliloti 1021 SMc03781 rRNA large subunit methyltransferase insig. 43 88
o Rhodopseudomonas palustris CGA009 TX73_000870 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 43 88
o Rhodospirillum rubrum S1H Rru_A1235 Protein of unknown function DUF163 (NCBI) sig. 43 89
o Magnetospirillum magneticum AMB-1 AMB_RS20655 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 44 88
o Xanthobacter sp. DMC5 GFF3949 Ribosomal RNA large subunit methyltransferase H no data 39 88
o Sphingobium sp. HT1-2 GFF751 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) cofit 42 89
  Azospirillum brasilense Sp245 AZOBR_RS04060 50S rRNA methyltransferase insig. 49 67
o Bacteroides thetaiotaomicron VPI-5482 BT1562 conserved hypothetical protein (NCBI ptt file) insig. 36 89
  Azospirillum sp. SherDot2 MPMX19_01940 Ribosomal RNA large subunit methyltransferase H insig. 48 67
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2503 Predicted SPOUT methyltransferase insig. 41 89
o Bacteroides stercoris CC31F HMPREF1181_RS10755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 37 89
o Bacteroides ovatus ATCC 8483 BACOVA_04305 putative rRNA large subunit m3Psi methyltransferase RlmH sig. 34 89
o Desulfovibrio vulgaris Hildenborough JW710 DVU1254 conserved hypothetical protein (TIGR) insig. 39 87
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS15935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 36 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 39 88
o Herbaspirillum seropedicae SmR1 HSERO_RS17780 50S rRNA methyltransferase insig. 38 88
o Bosea sp. OAE506 ABIE41_RS07565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 42 88
o Phocaeicola dorei CL03T12C01 ABI39_RS11895 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 34 89
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase insig. 39 88
  Rhodanobacter sp. FW510-T8 OKGIIK_09750 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 51 51
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 51 51
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 34 89
  Paraburkholderia graminis OAS925 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase no data 38 88
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07250 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 52 51
  Methanococcus maripaludis JJ MMJJ_RS09010 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 28 88
  Methanococcus maripaludis S2 MMP_RS05365 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 28 88
  Rhodanobacter denitrificans MT42 LRK55_RS02450 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 51 51
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02695 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 51 51
  Burkholderia phytofirmans PsJN BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H insig. 48 53
  Castellaniella sp019104865 MT123 ABCV34_RS02530 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 38 88
  Methylophilus sp. DMC18 GFF827 Ribosomal RNA large subunit methyltransferase H cofit 37 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_02460 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 37 68
  Erwinia tracheiphila SCR3 LU632_RS16370 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 37 68
  Pseudomonas stutzeri RCH2 Psest_0511 rRNA large subunit m3Psi methyltransferase RlmH sig. 34 88
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16470 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 31 88
  Pseudomonas sp. SVBP6 COO64_RS15615 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 41 62
  Variovorax sp. OAS795 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 39 89
  Desulfovibrio vulgaris Miyazaki F DvMF_0845 protein of unknown function DUF163 (RefSeq) insig. 37 88
  Pseudomonas sp. BP01 JOY50_RS17695 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 34 88
  Pseudomonas fluorescens SBW25 PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 43 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 43 50
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05099 Ribosomal RNA large subunit methyltransferase H no data 43 50
  Pseudomonas orientalis W4I3 QF045_RS27015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH cofit 43 50
  Pseudomonas simiae WCS417 PS417_24730 50S rRNA methyltransferase no data 43 50
  Pseudomonas putida KT2440 PP_4808 23S rRNA m3psi1915 methyltransferase sig. 42 52
  Variovorax sp. SCN45 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) insig. 38 89
  Pectobacterium carotovorum WPP14 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 34 89
  Enterobacter asburiae PDN3 EX28DRAFT_2327 rRNA large subunit m3Psi methyltransferase RlmH no data 37 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4549 LSU m3Psi1915 methyltransferase RlmH strong 37 68
  Serratia liquefaciens MT49 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 34 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 32 89
  Pseudomonas sp. RS175 PFR28_03869 Ribosomal RNA large subunit methyltransferase H sig. 43 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH no data 43 50
  Pseudomonas fluorescens FW300-N2E3 AO353_06480 50S rRNA methyltransferase sig. 43 50
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 36 88
  Ralstonia solanacearum UW163 UW163_RS10105 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 36 88
  Pseudomonas sp. DMC3 GFF3879 Ribosomal RNA large subunit methyltransferase H insig. 43 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH insig. 43 50
  Pseudomonas protegens RBAN4 FABNJH_27535 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 34 88
  Dickeya dianthicola 67-19 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 33 89
  Klebsiella michiganensis M5al BWI76_RS08040 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 37 68
  Rahnella sp. WP5 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 34 89
  Pseudomonas fluorescens FW300-N2C3 AO356_15305 50S rRNA methyltransferase strong 43 50
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH strong 43 50
  Shewanella loihica PV-4 Shew_2934 SPOUT methyltransferase superfamily protein (RefSeq) insig. 38 66
  Pantoea sp. MT58 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH strong 37 68
  Enterobacter sp. TBS_079 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H insig. 37 68
  Klebsiella pneumoniae MKP103 KDGMDA_16400 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH strong 36 68
  Klebsiella pneumoniae MRSN742743 GJGHJB_03581 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 36 68
  Erwinia amylovora T8 OLJFJH_17220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 36 68
  Vibrio cholerae E7946 ATCC 55056 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 35 89
  Ralstonia solanacearum GMI1000 RS_RS11015 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 35 88
  Ralstonia solanacearum PSI07 RPSI07_RS13660 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH strong 35 88
  Dickeya dadantii 3937 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 33 89
  Dickeya dianthicola ME23 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 33 89
  Pseudomonas sp. S08-1 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH insig. 32 88
  Bifidobacterium breve UCC2003 BBR_RS19685 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH strong 41 60
  Cellulophaga baltica 18 M666_RS17950 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 31 88
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS14130 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH cofit 37 68
  Escherichia coli BL21 ECD_00605 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent no data 37 68
  Escherichia coli ECOR27 NOLOHH_23735 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH strong 37 68
  Escherichia coli ECOR38 HEPCGN_00915 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 37 68
  Escherichia coli ECRC100 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH cofit 37 68
  Escherichia coli ECRC101 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 37 68
  Escherichia coli ECRC102 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 37 68
  Escherichia coli ECRC62 BNILDI_21745 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 37 68
  Escherichia coli ECRC98 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 37 68
  Escherichia coli ECRC99 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 37 68
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03070 Ribosomal RNA large subunit methyltransferase H no data 37 68
  Escherichia coli Nissle 1917 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH no data 37 68
  Escherichia coli BW25113 b0636 ybeA hypothetical protein (NCBI) sig. 37 68
  Pseudomonas aeruginosa MRSN321 PFGADD_00953 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 33 88
  Pseudomonas aeruginosa PUPa3 NPBIFN_00958 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 33 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS15430 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 42 53
  Pseudomonas aeruginosa PA14 IKLFDK_20650 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH sig. 33 88
  Escherichia fergusonii Becca EFB2_03456 Ribosomal RNA large subunit methyltransferase H sig. 37 68
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1876.1 LSU m3Psi1915 methyltransferase RlmH no data 37 67
  Lysobacter sp. OAE881 ABIE51_RS06755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 38 67
  Pseudomonas segetis P6 ACVTMO_RS05210 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH cofit 33 88
  Pseudomonas syringae pv. syringae B728a Psyr_4366 Protein of unknown function DUF163 no data 33 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4366 Protein of unknown function DUF163 sig. 33 88
  Acidovorax sp. GW101-3H11 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH insig. 43 53
  Shewanella amazonensis SB2B Sama_2587 rRNA large subunit methyltransferase (RefSeq) insig. 36 67
  Alteromonas macleodii MIT1002 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H no data 34 68
  Cupriavidus basilensis FW507-4G11 RR42_RS04710 50S rRNA methyltransferase insig. 43 50
  Kangiella aquimarina DSM 16071 B158DRAFT_0085 rRNA large subunit m3Psi methyltransferase RlmH strong 32 89
  Dechlorosoma suillum PS Dsui_0451 hypothetical protein insig. 35 89
  Shewanella sp. ANA-3 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) strong 32 67
  Shewanella oneidensis MR-1 SO1169 conserved hypothetical protein TIGR00246 (NCBI ptt file) strong 32 67
  Marinobacter adhaerens HP15 HP15_604 conserved hypothetical protein CHP00246 sig. 31 88
  Fusobacterium nucleatum SB010 HUW76_07715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH cofit 25 88
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4529 LSU m3Psi1915 methyltransferase RlmH insig. 41 53
  Acinetobacter baumannii LAC-4 RR41_RS09070 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH insig. 31 88
  Acinetobacter radioresistens SK82 MPMX26_02301 Ribosomal RNA large subunit methyltransferase H insig. 30 88