| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Agrobacterium fabrum C58 | Atu0657 | | hypothetical protein | strong | 100 | 100 |
| o | Rhizobium sp. OAE497 | ABIE40_RS03520 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 79 | 100 |
| o | Sinorhizobium meliloti 1021 | SMc00826 | | 16S ribosomal RNA methyltransferase RsmE | sig. | 70 | 100 |
| o | Rhodopseudomonas palustris CGA009 | TX73_005910 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 52 | 99 |
| o | Bosea sp. OAE506 | ABIE41_RS23100 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 53 | 99 |
| o | Xanthobacter sp. DMC5 | GFF1000 | | Ribosomal RNA small subunit methyltransferase E | insig. | 50 | 92 |
| o | Caulobacter crescentus NA1000 | CCNA_03528 | | RNA methyltransferase | sig. | 46 | 100 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_03528 | | RNA methyltransferase | cofit | 46 | 100 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c02950 | | RNA methyltransferase-like protein | sig. | 45 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_00577 | | Ribosomal RNA small subunit methyltransferase E | insig. | 46 | 99 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS01240 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 49 | 99 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS11890 | | 16S rRNA methyltransferase | sig. | 45 | 99 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS00350 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | no data | 40 | 100 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_3099 | | protein of unknown function DUF558 (RefSeq) | sig. | 43 | 99 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0807 | | RNA methyltransferase, RsmE family | insig. | 41 | 99 |
| o | Rhodospirillum rubrum S1H | Rru_A0571 | | hypothetical protein (NCBI) | strong | 46 | 100 |
| o | Sphingobium sp. HT1-2 | GFF1069 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) | cofit | 40 | 99 |
| | Marinobacter adhaerens HP15 | HP15_2926 | | ribosomal RNA small subunit methyltransferase E | cofit | 35 | 98 |
| | Pseudomonas stutzeri RCH2 | Psest_0305 | | RNA methyltransferase, RsmE family | sig. | 33 | 100 |
| | Pseudomonas putida KT2440 | PP_4985 | | 16S rRNA m3U1498 methyltransferase | sig. | 33 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS13645 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 33 | 100 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22075 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 32 | 100 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS37225 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 32 | 100 |
| | Acinetobacter radioresistens SK82 | MPMX26_01001 | | Ribosomal RNA small subunit methyltransferase E | cofit | 34 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2376 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | no data | 32 | 100 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_23325 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 32 | 100 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4630 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | strong | 31 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS00940 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 100 |
| | Pseudomonas sp. S08-1 | OH686_10855 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 32 | 100 |
| | Pseudomonas sp. DMC3 | GFF180 | | Ribosomal RNA small subunit methyltransferase E | cofit | 31 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS09765 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 33 | 100 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1043 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | sig. | 32 | 100 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_08050 | | 16S rRNA methyltransferase | strong | 31 | 100 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | insig. | 31 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | insig. | 31 | 100 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_13565 | | 16S rRNA methyltransferase | sig. | 30 | 100 |
| | Pseudomonas sp. RS175 | PFR28_04209 | | Ribosomal RNA small subunit methyltransferase E | sig. | 30 | 100 |
| | Pantoea sp. MT58 | IAI47_03620 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 31 | 90 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05440 | | Ribosomal RNA small subunit methyltransferase E | cofit | 31 | 100 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS16075 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 30 | 98 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS28200 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 30 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28200 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 30 | 100 |
| | Acinetobacter baumannii LAC-4 | RR41_RS05720 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 32 | 97 |
| | Pseudomonas simiae WCS417 | PS417_26545 | | 16S rRNA methyltransferase | strong | 29 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS03135 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 100 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0180 | | RNA methyltransferase, RsmE family | insig. | 30 | 99 |
| | Serratia liquefaciens MT49 | IAI46_21385 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 97 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3048 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | insig. | 29 | 98 |
| | Alteromonas macleodii MIT1002 | MIT1002_03054 | | Ribosomal RNA small subunit methyltransferase E | cofit | 31 | 93 |
| | Escherichia fergusonii Becca | EFB2_00956 | | Ribosomal RNA small subunit methyltransferase E | insig. | 30 | 90 |
| | Escherichia coli ECOR27 | NOLOHH_11150 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 90 |
| | Escherichia coli ECRC100 | OKFHMN_19280 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 90 |
| | Escherichia coli ECRC101 | MCAODC_09800 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 90 |
| | Escherichia coli ECRC102 | NIAGMN_17045 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 90 |
| | Escherichia coli ECRC98 | JDDGAC_22910 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 90 |
| | Escherichia coli ECRC99 | KEDOAH_08860 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | no data | 30 | 90 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00772 | | Ribosomal RNA small subunit methyltransferase E | insig. | 30 | 90 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS16390 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 90 |
| | Escherichia coli BW25113 | b2946 | yggJ | orf, hypothetical protein (VIMSS) | strong | 30 | 90 |
| | Shewanella amazonensis SB2B | Sama_0575 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | insig. | 30 | 98 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0806 | | hypothetical protein | cofit | 32 | 98 |
| | Escherichia coli BL21 | ECD_02776 | | 16S rRNA m(3)U1498 methyltransferase, SAM-dependent | cofit | 30 | 90 |
| | Escherichia coli ECOR38 | HEPCGN_18585 | | Ribosomal RNA small subunit methyltransferase E | insig. | 30 | 90 |
| | Dickeya dadantii 3937 | DDA3937_RS18555 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 98 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS12130 | rsmE;go_function=methyltransferase | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 31 | 91 |
| | Escherichia coli ECRC62 | BNILDI_09730 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 90 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_04585 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 31 | 90 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_03425 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 98 |
| | Erwinia tracheiphila SCR3 | LU632_RS05485 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 29 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS24070 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 31 | 90 |
| | Dickeya dianthicola 67-19 | HGI48_RS18490 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 98 |
| | Dickeya dianthicola ME23 | DZA65_RS19625 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 98 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS01505 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 30 | 88 |
| | Shewanella loihica PV-4 | Shew_3224 | | hypothetical protein (RefSeq) | strong | 29 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06311 | | 16S rRNA (uracil1498-N3)-methyltransferase | insig. | 30 | 100 |
| | Rahnella sp. WP5 | EX31_RS02660 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 97 |
| | Erwinia amylovora T8 | OLJFJH_08575 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 31 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_003540 | | 16S rRNA (uracil1498-N3)-methyltransferase | strong | 30 | 100 |
| | Enterobacter sp. TBS_079 | MPMX20_03804 | | Ribosomal RNA small subunit methyltransferase E | sig. | 30 | 90 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1558.1 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | no data | 28 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16855 | | 16S rRNA methyltransferase | strong | 32 | 88 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2984 | | RNA methyltransferase, RsmE family | insig. | 30 | 90 |
| | Shewanella oneidensis MR-1 | SO0832 | | conserved hypothetical protein TIGR00046 (NCBI ptt file) | strong | 29 | 89 |
| | Shewanella sp. ANA-3 | Shewana3_3444 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | insig. | 28 | 89 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS07110 | | 16S rRNA methyltransferase | sig. | 34 | 91 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS05880 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 88 |
| | Ralstonia solanacearum UW163 | UW163_RS07745 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 88 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS17590 | | 16S rRNA methyltransferase | insig. | 33 | 99 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS11365 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 88 |
| | Lysobacter sp. OAE881 | ABIE51_RS05260 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 31 | 99 |
| | Methylophilus sp. DMC18 | GFF2490 | | Ribosomal RNA small subunit methyltransferase E | insig. | 30 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS13825 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 88 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2462 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | cofit | 32 | 91 |
| | Dechlorosoma suillum PS | Dsui_1568 | | RNA methyltransferase, RsmE family | no data | 34 | 97 |
| | Pectobacterium carotovorum WPP14 | HER17_RS02640 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 27 | 98 |
| | Variovorax sp. SCN45 | GFF3255 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) | insig. | 32 | 82 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_02495 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 30 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS27020 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 31 | 91 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS10135 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 31 | 90 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3055 | | RNA methyltransferase, RsmE family | sig. | 26 | 96 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4328 | | conserved hypothetical protein (NCBI ptt file) | insig. | 30 | 89 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05130 | | RNA methyltransferase, RsmE family | insig. | 28 | 91 |
| | Cellulophaga baltica 18 | M666_RS12115 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 26 | 90 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS10230 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 31 | 83 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS05940 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 29 | 89 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS05940 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 89 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS18150 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 29 | 89 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS02335 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 30 | 91 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS23620 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 26 | 87 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4323 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | strong | 29 | 92 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_11035 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 27 | 92 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS15445 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 29 | 83 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1685 | | conserved hypothetical protein TIGR00046 (TIGR) | insig. | 29 | 89 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS05765 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | insig. | 29 | 83 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS04160 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 32 | 83 |
| | Fusobacterium nucleatum SB010 | HUW76_04180 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 30 | 88 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS03930 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | no data | 31 | 83 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0340 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | insig. | 27 | 88 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS17085 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 28 | 87 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_05265 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | sig. | 25 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS09595 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | cofit | 34 | 50 |
| | Pseudomonas putida KT2440 | PP_5019 | | Ribosomal RNA small subunit methyltransferase E | no data | 34 | 50 |
| | Bifidobacterium breve UCC2003 | BBR_RS15150 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 42 | 24 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11185 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | no data | 31 | 49 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28170 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | strong | 31 | 49 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50900 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | no data | 31 | 49 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3787 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | no data | 27 | 90 |
| | Pseudomonas segetis P6 | ACVTMO_RS21155 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | no data | 33 | 46 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_12340 | | 16S rRNA methyltransferase | no data | 35 | 46 |