Homologs of ssb from Shewanella oneidensis MR-1

ssb: single-strand binding protein (NCBI ptt file)
SEED: Single-stranded DNA-binding protein
KEGG: single-strand DNA-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO4028 ssb single-strand binding protein (NCBI ptt file) no data 100 100
o Shewanella sp. ANA-3 Shewana3_3590 single-strand binding protein (RefSeq) no data 88 73
  Shewanella amazonensis SB2B Sama_0516 single-strand binding protein (RefSeq) no data 85 67
  Kangiella aquimarina DSM 16071 B158DRAFT_0887 single-strand binding protein no data 71 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_02095 ssDNA-binding protein no data 65 72
  Escherichia coli BL21 ECD_03931 single-stranded DNA-binding protein no data 67 60
  Escherichia fergusonii Becca EFB2_04532 Single-stranded DNA-binding protein no data 67 60
  Escherichia coli ECOR27 NOLOHH_05140 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli ECOR38 HEPCGN_11505 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli ECRC100 OKFHMN_12890 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli ECRC101 MCAODC_03400 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli ECRC102 NIAGMN_10735 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli ECRC62 BNILDI_06385 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli ECRC98 JDDGAC_16525 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli ECRC99 KEDOAH_15260 ssb1 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03982 Single-stranded DNA-binding protein no data 67 60
  Escherichia coli Nissle 1917 ECOLIN_RS23490 single-stranded DNA-binding protein SSB1 no data 67 60
  Escherichia coli BW25113 b4059 ssb single-strand DNA-binding protein (NCBI) no data 67 60
  Dickeya dadantii 3937 DDA3937_RS17610 single-stranded DNA-binding protein SSB1 no data 81 47
  Dickeya dianthicola 67-19 HGI48_RS17615 single-stranded DNA-binding protein SSB1 no data 81 47
  Dickeya dianthicola ME23 DZA65_RS18740 single-stranded DNA-binding protein SSB1 no data 81 47
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07625 ssb single-stranded DNA-binding protein no data 76 49
  Pantoea sp. MT58 IAI47_17810 single-stranded DNA-binding protein SSB1 no data 62 72
  Pectobacterium carotovorum WPP14 HER17_RS03545 single-stranded DNA-binding protein SSB1 no data 81 47
  Escherichia coli ECOR27 NOLOHH_00115 ssb single-stranded DNA-binding protein insig. 71 55
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21135 single-stranded DNA-binding protein SSB1 no data 78 48
  Klebsiella michiganensis M5al BWI76_RS01955 ssDNA-binding protein no data 78 48
o Alteromonas macleodii MIT1002 MIT1002_00191 Helix-destabilizing protein no data 56 81
  Serratia liquefaciens MT49 IAI46_22900 single-stranded DNA-binding protein SSB1 no data 79 47
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21980 single-stranded DNA-binding protein cofit 78 48
  Erwinia amylovora T8 OLJFJH_02875 single-stranded DNA-binding protein insig. 77 49
  Erwinia amylovora T8 OLJFJH_03420 ssDNA-binding protein no data 79 47
  Erwinia tracheiphila SCR3 LU632_RS23680 ssb1 single-stranded DNA-binding protein SSB1 no data 78 47
  Klebsiella pneumoniae MKP103 KDGMDA_10405 single-stranded DNA-binding protein SSB1 no data 79 47
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11160 Single-stranded DNA-binding protein no data 78 47
  Rahnella sp. WP5 EX31_RS11995 single-stranded DNA-binding protein no data 78 47
  Pseudomonas aeruginosa MRSN321 DY961_RS29395 ssb;go_function=single-stranded single-stranded DNA-binding protein no data 78 47
  Pseudomonas aeruginosa PA14 IKLFDK_21785 Single-stranded DNA-binding protein no data 78 47
  Pseudomonas aeruginosa PUPa3 DQ20_RS43720 ssb;go_function=single-stranded single-stranded DNA-binding protein no data 78 47
  Serratia liquefaciens MT49 IAI46_15240 single-stranded DNA-binding protein cofit 61 68
  Enterobacter sp. TBS_079 MPMX20_04731 Plasmid-derived single-stranded DNA-binding protein strong 55 69
  Enterobacter asburiae PDN3 EX28DRAFT_4245 single stranded DNA-binding protein (ssb) no data 76 47
  Enterobacter sp. TBS_079 MPMX20_00277 Single-stranded DNA-binding protein no data 76 47
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1142 Single-stranded DNA-binding protein sig. 72 49
  Pseudomonas sp. RS175 PFR28_03972 Single-stranded DNA-binding protein no data 60 70
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03740 Single-stranded DNA-binding protein cofit 73 47
  Escherichia coli BL21 ECD_03522 Single-strand binding protein (SSB) (Helix-destabilizing protein) sig. 70 48
  Pseudomonas sp. SVBP6 COO64_RS16065 single-stranded DNA-binding protein no data 65 59
o Marinobacter adhaerens HP15 HP15_408 single-stranded DNA-binding protein no data 47 99
  Klebsiella pneumoniae MKP103 KDGMDA_01165 single-stranded DNA-binding protein insig. 68 50
  Pseudomonas stutzeri RCH2 Psest_3574 single stranded DNA-binding protein (ssb) no data 68 53
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1430 Single-stranded DNA-binding protein no data 76 47
  Klebsiella pneumoniae MKP103 KDGMDA_01995 single-stranded DNA-binding protein insig. 70 49
  Dickeya dianthicola ME23 DZA65_RS04880 single-stranded DNA-binding protein insig. 67 51
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15755 Single-stranded DNA-binding protein no data 66 50
  Pseudomonas fluorescens FW300-N2C3 AO356_14795 single-stranded DNA-binding protein no data 61 64
  Pseudomonas sp. S08-1 OH686_15505 Single-stranded DNA-binding protein no data 66 50
  Pseudomonas segetis P6 ACVTMO_RS16855 single-stranded DNA-binding protein insig. 59 65
o Shewanella loihica PV-4 Shew_0535 single-strand binding protein (RefSeq) no data 53 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4890 Single-stranded DNA-binding protein no data 58 66
  Pseudomonas segetis P6 ACVTMO_RS04800 single-stranded DNA-binding protein no data 68 49
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2613 Single-stranded DNA-binding protein no data 60 64
  Escherichia coli ECOR27 NOLOHH_24290 ssb single-stranded DNA-binding protein insig. 69 48
  Pseudomonas sp. DMC3 GFF3794 Single-stranded DNA-binding protein no data 69 49
  Pseudomonas syringae pv. syringae B728a Psyr_4518 single-strand binding protein no data 68 47
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4518 single-strand binding protein no data 68 47
  Escherichia coli ECRC100 OKFHMN_00060 ssb single-stranded DNA-binding protein cofit 63 54
  Escherichia coli ECRC101 MCAODC_15505 ssb single-stranded DNA-binding protein insig. 63 54
  Escherichia coli ECRC102 NIAGMN_28820 ssb single-stranded DNA-binding protein insig. 63 54
  Escherichia coli ECRC98 JDDGAC_30050 ssb single-stranded DNA-binding protein insig. 63 54
  Pseudomonas fluorescens SBW25 PFLU_RS27015 single-stranded DNA-binding protein no data 69 46
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27015 single-stranded DNA-binding protein no data 69 46
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05192 Single-stranded DNA-binding protein no data 69 46
  Pseudomonas orientalis W4I3 QF045_RS27405 single-stranded DNA-binding protein no data 69 46
  Pseudomonas simiae WCS417 PS417_25385 single-stranded DNA-binding protein no data 69 46
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04423 Plasmid-derived single-stranded DNA-binding protein insig. 62 54
  Pseudomonas sp. BP01 JOY50_RS20295 single-stranded DNA-binding protein no data 69 46
  Pseudomonas putida KT2440 PP_0485 Single-stranded DNA-binding protein no data 69 46
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1285 Single-stranded DNA-binding protein no data 69 46
  Pseudomonas fluorescens FW300-N2E3 AO353_06845 single-stranded DNA-binding protein no data 69 46
  Methylophilus sp. DMC18 GFF2006 Plasmid-derived single-stranded DNA-binding protein no data 59 61
  Herbaspirillum seropedicae SmR1 HSERO_RS19795 single-stranded DNA-binding protein no data 66 48
  Shewanella sp. ANA-3 Shewana3_4229 single-strand binding protein (RefSeq) insig. 51 72
  Castellaniella sp019104865 MT123 ABCV34_RS12735 single-stranded DNA-binding protein no data 64 48
  Acidovorax sp. GW101-3H11 Ac3H11_4383 Single-stranded DNA-binding protein no data 66 48
  Dechlorosoma suillum PS Dsui_3479 single stranded DNA-binding protein no data 62 45
  Cupriavidus basilensis FW507-4G11 RR42_RS02155 single-stranded DNA-binding protein no data 64 47
  Rhodanobacter sp. FW510-T8 OKGIIK_01615 Single-stranded DNA-binding protein no data 64 46
  Variovorax sp. OAS795 ABID97_RS04350 single-stranded DNA-binding protein no data 64 48
  Variovorax sp. SCN45 GFF4942 Single-stranded DNA-binding protein no data 64 48
  Burkholderia phytofirmans PsJN BPHYT_RS02980 single-stranded DNA-binding protein no data 65 47
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01911 single-strand binding protein no data 65 47
  Paraburkholderia graminis OAS925 ABIE53_000734 single-strand DNA-binding protein no data 65 47
  Rhodanobacter denitrificans MT42 LRK55_RS18415 single-stranded DNA-binding protein insig. 60 52
  Paraburkholderia sabiae LMG 24235 QEN71_RS01835 single-stranded DNA-binding protein no data 64 47
  Castellaniella sp019104865 MT123 ABCV34_RS03270 single-stranded DNA-binding protein insig. 57 50
  Ralstonia solanacearum GMI1000 RS_RS02090 single-stranded DNA-binding protein no data 64 48
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS18215 single-stranded DNA-binding protein insig. 60 47
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11205 single-stranded DNA-binding protein no data 60 46
  Phaeobacter inhibens DSM 17395 PGA1_c14120 single-stranded DNA-binding protein Ssb no data 60 47